RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 NISCHQ9Y2I1 1504 aa40.48■■■■■ 4.07
CRTC3-212ENST00000561218 CCDC180Q9P1Z9 1646 aa36.17■■■■□ 3.38
CRTC3-212ENST00000561218 ABCC9O60706 1549 aa36.1■■■■□ 3.37
CRTC3-212ENST00000561218 RB1CC1Q8TDY2 1594 aa34.41■■■■□ 3.1
CRTC3-212ENST00000561218 DCAF8L2P0C7V8 631 aa34.26■■■■□ 3.08
CRTC3-212ENST00000561218 NACADO15069 1562 aa34.22■■■■□ 3.07
CRTC3-212ENST00000561218 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
CRTC3-212ENST00000561218 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
CRTC3-212ENST00000561218 PABPN1Q86U42 306 aaKnown RBP eCLIP33.7■■■□□ 2.99
CRTC3-212ENST00000561218 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
CRTC3-212ENST00000561218 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
CRTC3-212ENST00000561218 DCAF1Q9Y4B6 1507 aa33.43■■■□□ 2.94
CRTC3-212ENST00000561218 BICRAQ9NZM4 1560 aa33.35■■■□□ 2.93
CRTC3-212ENST00000561218 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
CRTC3-212ENST00000561218 SHROOM4Q9ULL8 1493 aa32.96■■■□□ 2.87
CRTC3-212ENST00000561218 CC2D2AQ9P2K1 1620 aa32.57■■■□□ 2.8
CRTC3-212ENST00000561218 EIF4G1Q04637 1599 aaKnown RBP32.55■■■□□ 2.8
CRTC3-212ENST00000561218 CECR2Q9BXF3 1484 aa32.51■■■□□ 2.79
CRTC3-212ENST00000561218 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
CRTC3-212ENST00000561218 ATAD2BQ9ULI0 1458 aa31.54■■■□□ 2.64
CRTC3-212ENST00000561218 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
CRTC3-212ENST00000561218 SMARCA2P51531 1590 aa31.46■■■□□ 2.63
CRTC3-212ENST00000561218 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
CRTC3-212ENST00000561218 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
CRTC3-212ENST00000561218 BAZ1BQ9UIG0 1483 aaKnown RBP31.26■■■□□ 2.59
CRTC3-212ENST00000561218 MROH2BQ7Z745 1585 aa31.19■■■□□ 2.58
CRTC3-212ENST00000561218 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
CRTC3-212ENST00000561218 PEG3Q9GZU2 1588 aa31.18■■■□□ 2.58
CRTC3-212ENST00000561218 NESP48681 1621 aa31.04■■■□□ 2.56
CRTC3-212ENST00000561218 CUX2O14529 1486 aa31.01■■■□□ 2.56
CRTC3-212ENST00000561218 DNAJC5Q9H3Z4 198 aa30.86■■■□□ 2.53
CRTC3-212ENST00000561218 LAMC3Q9Y6N6 1575 aa30.83■■■□□ 2.53
CRTC3-212ENST00000561218 WIZO95785 1651 aa30.8■■■□□ 2.52
CRTC3-212ENST00000561218 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
CRTC3-212ENST00000561218 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
CRTC3-212ENST00000561218 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
CRTC3-212ENST00000561218 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
CRTC3-212ENST00000561218 KIF21AQ7Z4S6 1674 aa30.57■■■□□ 2.48
CRTC3-212ENST00000561218 TOP2AP11388 1531 aaKnown RBP30.44■■■□□ 2.46
CRTC3-212ENST00000561218 MRC2Q9UBG0 1479 aa30.41■■■□□ 2.46
CRTC3-212ENST00000561218 CFTRP13569 1480 aa30.35■■■□□ 2.45
CRTC3-212ENST00000561218 CEP164Q9UPV0 1460 aa30.33■■■□□ 2.45
CRTC3-212ENST00000561218 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
CRTC3-212ENST00000561218 WDR62O43379 1518 aa30.28■■■□□ 2.44
CRTC3-212ENST00000561218 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
CRTC3-212ENST00000561218 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
CRTC3-212ENST00000561218 PRDM2Q13029 1718 aa29.93■■■□□ 2.38
CRTC3-212ENST00000561218 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
CRTC3-212ENST00000561218 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
CRTC3-212ENST00000561218 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
CRTC3-212ENST00000561218 IFT140Q96RY7 1462 aa29.73■■■□□ 2.35
CRTC3-212ENST00000561218 ZNF608Q9ULD9 1512 aaPredicted RBP29.65■■■□□ 2.34
CRTC3-212ENST00000561218 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.33
CRTC3-212ENST00000561218 TRIM41Q8WV44 630 aa29.62■■■□□ 2.33
CRTC3-212ENST00000561218 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
CRTC3-212ENST00000561218 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
CRTC3-212ENST00000561218 EIF4G3O43432 1585 aaKnown RBP29.44■■■□□ 2.3
CRTC3-212ENST00000561218 AQRO60306 1485 aaKnown RBP eCLIP29.43■■■□□ 2.3
CRTC3-212ENST00000561218 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
CRTC3-212ENST00000561218 SOGA1O94964 1423 aa29.38■■■□□ 2.29
CRTC3-212ENST00000561218 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
CRTC3-212ENST00000561218 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
CRTC3-212ENST00000561218 FGD5Q6ZNL6 1462 aa29.3■■■□□ 2.28
CRTC3-212ENST00000561218 CUX1P39880 1505 aa29.3■■■□□ 2.28
CRTC3-212ENST00000561218 FBLN2P98095 1184 aa29.29■■■□□ 2.28
CRTC3-212ENST00000561218 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
CRTC3-212ENST00000561218 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
CRTC3-212ENST00000561218 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
CRTC3-212ENST00000561218 CHD1O14646 1710 aa29.16■■■□□ 2.26
CRTC3-212ENST00000561218 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
CRTC3-212ENST00000561218 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
CRTC3-212ENST00000561218 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
CRTC3-212ENST00000561218 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
CRTC3-212ENST00000561218 GRIN2BQ13224 1484 aa29.08■■■□□ 2.25
CRTC3-212ENST00000561218 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
CRTC3-212ENST00000561218 CYB5RLQ6IPT4 315 aa29.04■■■□□ 2.24
CRTC3-212ENST00000561218 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
CRTC3-212ENST00000561218 ABCA10Q8WWZ4 1543 aa28.98■■■□□ 2.23
CRTC3-212ENST00000561218 SYNJ2O15056 1496 aa28.96■■■□□ 2.23
CRTC3-212ENST00000561218 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.23
CRTC3-212ENST00000561218 SYNJ1O43426 1573 aa28.9■■■□□ 2.22
CRTC3-212ENST00000561218 PBRM1Q86U86 1689 aa28.87■■■□□ 2.21
CRTC3-212ENST00000561218 ARAP1Q96P48 1450 aa28.87■■■□□ 2.21
CRTC3-212ENST00000561218 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
CRTC3-212ENST00000561218 CLASP1Q7Z460 1538 aa28.86■■■□□ 2.21
CRTC3-212ENST00000561218 TOP2BQ02880 1626 aa28.86■■■□□ 2.21
CRTC3-212ENST00000561218 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
CRTC3-212ENST00000561218 GRIN2AQ12879 1464 aa28.68■■■□□ 2.18
CRTC3-212ENST00000561218 TRHP20396 242 aaPredicted RBP28.67■■■□□ 2.18
CRTC3-212ENST00000561218 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
CRTC3-212ENST00000561218 ADAMTS12P58397 1594 aa28.65■■■□□ 2.18
CRTC3-212ENST00000561218 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
CRTC3-212ENST00000561218 NUP160Q12769 1436 aa28.58■■■□□ 2.17
CRTC3-212ENST00000561218 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
CRTC3-212ENST00000561218 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
CRTC3-212ENST00000561218 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
CRTC3-212ENST00000561218 JPH4Q96JJ6 628 aa28.38■■■□□ 2.13
CRTC3-212ENST00000561218 SHROOM2Q13796 1616 aa28.36■■■□□ 2.13
CRTC3-212ENST00000561218 IGF1RP08069 1367 aa28.36■■■□□ 2.13
CRTC3-212ENST00000561218 PRG4Q92954 1404 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms