RNA–Protein interactions for RNA: ENST00000561156.1

TNFAIP2-210, Transcript of TNF alpha induced protein 2, humanhuman

TSL 4

Gene TNFAIP2, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-210ENST00000561156 NISCHQ9Y2I1 1504 aa28.78■■■□□ 2.2
TNFAIP2-210ENST00000561156 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
TNFAIP2-210ENST00000561156 ABCC9O60706 1549 aa25.2■■□□□ 1.62
TNFAIP2-210ENST00000561156 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
TNFAIP2-210ENST00000561156 NACADO15069 1562 aa24.2■■□□□ 1.47
TNFAIP2-210ENST00000561156 MYO15BQ96JP2 1530 aa24.02■■□□□ 1.44
TNFAIP2-210ENST00000561156 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
TNFAIP2-210ENST00000561156 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
TNFAIP2-210ENST00000561156 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
TNFAIP2-210ENST00000561156 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
TNFAIP2-210ENST00000561156 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
TNFAIP2-210ENST00000561156 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
TNFAIP2-210ENST00000561156 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
TNFAIP2-210ENST00000561156 SHROOM4Q9ULL8 1493 aa23.32■■□□□ 1.32
TNFAIP2-210ENST00000561156 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
TNFAIP2-210ENST00000561156 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
TNFAIP2-210ENST00000561156 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
TNFAIP2-210ENST00000561156 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
TNFAIP2-210ENST00000561156 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
TNFAIP2-210ENST00000561156 BAZ1AQ9NRL2 1556 aaPredicted RBP22.35■■□□□ 1.17
TNFAIP2-210ENST00000561156 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
TNFAIP2-210ENST00000561156 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
TNFAIP2-210ENST00000561156 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
TNFAIP2-210ENST00000561156 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
TNFAIP2-210ENST00000561156 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
TNFAIP2-210ENST00000561156 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
TNFAIP2-210ENST00000561156 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
TNFAIP2-210ENST00000561156 WIZO95785 1651 aa21.98■■□□□ 1.11
TNFAIP2-210ENST00000561156 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
TNFAIP2-210ENST00000561156 LAMC3Q9Y6N6 1575 aa21.79■■□□□ 1.08
TNFAIP2-210ENST00000561156 NESP48681 1621 aa21.78■■□□□ 1.08
TNFAIP2-210ENST00000561156 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
TNFAIP2-210ENST00000561156 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
TNFAIP2-210ENST00000561156 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
TNFAIP2-210ENST00000561156 CUX2O14529 1486 aa21.63■■□□□ 1.05
TNFAIP2-210ENST00000561156 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
TNFAIP2-210ENST00000561156 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
TNFAIP2-210ENST00000561156 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
TNFAIP2-210ENST00000561156 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
TNFAIP2-210ENST00000561156 CFTRP13569 1480 aa21.46■■□□□ 1.03
TNFAIP2-210ENST00000561156 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.02
TNFAIP2-210ENST00000561156 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
TNFAIP2-210ENST00000561156 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
TNFAIP2-210ENST00000561156 WDR62O43379 1518 aa21.37■■□□□ 1.01
TNFAIP2-210ENST00000561156 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
TNFAIP2-210ENST00000561156 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
TNFAIP2-210ENST00000561156 DNAJC5Q9H3Z4 198 aa21.14■□□□□ 0.97
TNFAIP2-210ENST00000561156 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
TNFAIP2-210ENST00000561156 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
TNFAIP2-210ENST00000561156 ABCC8Q09428 1581 aa21.02■□□□□ 0.95
TNFAIP2-210ENST00000561156 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
TNFAIP2-210ENST00000561156 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
TNFAIP2-210ENST00000561156 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
TNFAIP2-210ENST00000561156 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
TNFAIP2-210ENST00000561156 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
TNFAIP2-210ENST00000561156 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
TNFAIP2-210ENST00000561156 CUX1P39880 1505 aa20.82■□□□□ 0.92
TNFAIP2-210ENST00000561156 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
TNFAIP2-210ENST00000561156 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
TNFAIP2-210ENST00000561156 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
TNFAIP2-210ENST00000561156 BIVM-ERCC5R4GMW8 1640 aa20.7■□□□□ 0.9
TNFAIP2-210ENST00000561156 SOGA1O94964 1423 aa20.68■□□□□ 0.9
TNFAIP2-210ENST00000561156 CHD1O14646 1710 aa20.67■□□□□ 0.9
TNFAIP2-210ENST00000561156 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
TNFAIP2-210ENST00000561156 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.99e-7■■■■■ 44.5
TNFAIP2-210ENST00000561156 PBRM1Q86U86 1689 aa20.62■□□□□ 0.89
TNFAIP2-210ENST00000561156 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
TNFAIP2-210ENST00000561156 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.89
TNFAIP2-210ENST00000561156 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
TNFAIP2-210ENST00000561156 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
TNFAIP2-210ENST00000561156 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
TNFAIP2-210ENST00000561156 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
TNFAIP2-210ENST00000561156 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
TNFAIP2-210ENST00000561156 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
TNFAIP2-210ENST00000561156 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
TNFAIP2-210ENST00000561156 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
TNFAIP2-210ENST00000561156 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
TNFAIP2-210ENST00000561156 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
TNFAIP2-210ENST00000561156 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
TNFAIP2-210ENST00000561156 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
TNFAIP2-210ENST00000561156 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
TNFAIP2-210ENST00000561156 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
TNFAIP2-210ENST00000561156 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
TNFAIP2-210ENST00000561156 ERICH3Q5RHP9 1530 aa20.34■□□□□ 0.85
TNFAIP2-210ENST00000561156 FBLN2P98095 1184 aa20.34■□□□□ 0.85
TNFAIP2-210ENST00000561156 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
TNFAIP2-210ENST00000561156 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
TNFAIP2-210ENST00000561156 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
TNFAIP2-210ENST00000561156 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
TNFAIP2-210ENST00000561156 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
TNFAIP2-210ENST00000561156 CUL7Q14999 1698 aa20.19■□□□□ 0.82
TNFAIP2-210ENST00000561156 NUP160Q12769 1436 aa20.18■□□□□ 0.82
TNFAIP2-210ENST00000561156 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
TNFAIP2-210ENST00000561156 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
TNFAIP2-210ENST00000561156 SHROOM2Q13796 1616 aa20.14■□□□□ 0.81
TNFAIP2-210ENST00000561156 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
TNFAIP2-210ENST00000561156 IGF1RP08069 1367 aa20.05■□□□□ 0.8
TNFAIP2-210ENST00000561156 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
TNFAIP2-210ENST00000561156 CYB5RLQ6IPT4 315 aa20.02■□□□□ 0.8
TNFAIP2-210ENST00000561156 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms