RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
RNF111-211ENST00000560952 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
RNF111-211ENST00000560952 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
RNF111-211ENST00000560952 SENP3Q9H4L4 574 aaPredicted RBP11.62□□□□□ -0.55
RNF111-211ENST00000560952 PHF23Q9BUL5 403 aaPredicted RBP11.07□□□□□ -0.64
RNF111-211ENST00000560952 MSH5O43196 834 aa10.94□□□□□ -0.66
RNF111-211ENST00000560952 FOXD1Q16676 465 aa10.73□□□□□ -0.69
RNF111-211ENST00000560952 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
RNF111-211ENST00000560952 POTEHQ6S545 545 aa9.83□□□□□ -0.84
RNF111-211ENST00000560952 PIAS4Q8N2W9 510 aaPredicted RBP9.75□□□□□ -0.85
RNF111-211ENST00000560952 RNF39Q9H2S5 420 aa9.01□□□□□ -0.97
RNF111-211ENST00000560952 C1QBPQ07021 282 aaKnown RBP8.98□□□□□ -0.97
RNF111-211ENST00000560952 DMRT2Q9Y5R5 561 aa8.91□□□□□ -0.98
RNF111-211ENST00000560952 PPP6R1Q9UPN7 881 aa8.75□□□□□ -1.01
RNF111-211ENST00000560952 ADRA2BP18089 450 aa8.69□□□□□ -1.02
RNF111-211ENST00000560952 PLSCR2Q9NRY7 297 aa8.66□□□□□ -1.02
RNF111-211ENST00000560952 SP7Q8TDD2 431 aaPredicted RBP8.59□□□□□ -1.03
RNF111-211ENST00000560952 DCAF8L1A6NGE4 600 aa8.5□□□□□ -1.05
RNF111-211ENST00000560952 SCAF1Q9H7N4 1312 aaKnown RBP8.48□□□□□ -1.05
RNF111-211ENST00000560952 PLPPR3Q6T4P5 718 aa8.42□□□□□ -1.06
RNF111-211ENST00000560952 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
RNF111-211ENST00000560952 DNAJC5BQ9UF47 199 aa8.33□□□□□ -1.08
RNF111-211ENST00000560952 CHRDL2Q6WN34 429 aa8.04□□□□□ -1.12
RNF111-211ENST00000560952 HOXD11P31277 338 aaPredicted RBP8.03□□□□□ -1.12
RNF111-211ENST00000560952 LHX8Q68G74 356 aa8.03□□□□□ -1.12
RNF111-211ENST00000560952 PCDH10Q9P2E7 1040 aa7.94□□□□□ -1.14
RNF111-211ENST00000560952 DSG3P32926 999 aa7.9□□□□□ -1.14
RNF111-211ENST00000560952 RBM42Q9BTD8 480 aaKnown RBP7.89□□□□□ -1.15
RNF111-211ENST00000560952 HAX1O00165 279 aa7.79□□□□□ -1.16
RNF111-211ENST00000560952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.65□□□□□ -1.18
RNF111-211ENST00000560952 CAPN15O75808 1086 aa7.64□□□□□ -1.19
RNF111-211ENST00000560952 RNF216Q9NWF9 866 aaPredicted RBP7.63□□□□□ -1.19
RNF111-211ENST00000560952 POTEMA6NI47 508 aa7.58□□□□□ -1.2
RNF111-211ENST00000560952 POTEGQ6S5H5 508 aa7.51□□□□□ -1.21
RNF111-211ENST00000560952 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
RNF111-211ENST00000560952 SPINK5Q9NQ38 1064 aaPredicted RBP7.39□□□□□ -1.23
RNF111-211ENST00000560952 APLP2Q06481 763 aa7.37□□□□□ -1.23
RNF111-211ENST00000560952 PPP4R3CPQ6ZMV5 832 aa7.36□□□□□ -1.23
RNF111-211ENST00000560952 CNKSR2Q8WXI2 1034 aa7.33□□□□□ -1.24
RNF111-211ENST00000560952 GABBR2O75899 941 aa7.31□□□□□ -1.24
RNF111-211ENST00000560952 AKT1S1Q96B36 256 aa7.3□□□□□ -1.24
RNF111-211ENST00000560952 EVX2Q03828 476 aa7.3□□□□□ -1.24
RNF111-211ENST00000560952 FXR2P51116 673 aaKnown RBP eCLIP7.29□□□□□ -1.24
RNF111-211ENST00000560952 ZNF219Q9P2Y4 722 aaPredicted RBP7.28□□□□□ -1.24
RNF111-211ENST00000560952 NCBP3Q53F19 620 aaKnown RBP7.24□□□□□ -1.25
RNF111-211ENST00000560952 CLCN6P51797 869 aa7.18□□□□□ -1.26
RNF111-211ENST00000560952 ABCB7O75027 752 aa7.17□□□□□ -1.26
RNF111-211ENST00000560952 U3KPZ7 1027 aaPredicted RBP7.17□□□□□ -1.26
RNF111-211ENST00000560952 C19orf67A6NJJ6 358 aa7.12□□□□□ -1.27
RNF111-211ENST00000560952 TRHP20396 242 aaPredicted RBP7.1□□□□□ -1.27
RNF111-211ENST00000560952 REM2Q8IYK8 340 aaPredicted RBP7.07□□□□□ -1.28
RNF111-211ENST00000560952 OTUD5Q96G74 571 aa7.06□□□□□ -1.28
RNF111-211ENST00000560952 KCNA4P22459 653 aa7.05□□□□□ -1.28
RNF111-211ENST00000560952 NPM3O75607 178 aaKnown RBP7.02□□□□□ -1.29
RNF111-211ENST00000560952 POTEIP0CG38 1075 aa6.98□□□□□ -1.29
RNF111-211ENST00000560952 PITPNM1O00562 1244 aa6.95□□□□□ -1.3
RNF111-211ENST00000560952 CDAN1Q8IWY9 1227 aa6.94□□□□□ -1.3
RNF111-211ENST00000560952 DCBLD2Q96PD2 775 aa6.93□□□□□ -1.3
RNF111-211ENST00000560952 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
RNF111-211ENST00000560952 MAMSTRQ6ZN01 415 aa6.89□□□□□ -1.31
RNF111-211ENST00000560952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.88□□□□□ -1.31
RNF111-211ENST00000560952 HNRNPUL2Q1KMD3 747 aaKnown RBP6.88□□□□□ -1.31
RNF111-211ENST00000560952 FAM163AQ96GL9 167 aaPredicted RBP6.83□□□□□ -1.32
RNF111-211ENST00000560952 PRKAR2AP13861 404 aaKnown RBP6.81□□□□□ -1.32
RNF111-211ENST00000560952 SLC4A1APQ9BWU0 796 aaKnown RBP6.76□□□□□ -1.33
RNF111-211ENST00000560952 SPNS2Q8IVW8 549 aa6.76□□□□□ -1.33
RNF111-211ENST00000560952 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
RNF111-211ENST00000560952 ZBTB12Q9Y330 459 aaPredicted RBP6.73□□□□□ -1.33
RNF111-211ENST00000560952 SAMD1Q6SPF0 538 aaPredicted RBP6.67□□□□□ -1.34
RNF111-211ENST00000560952 POTEB2H3BUK9 544 aa6.65□□□□□ -1.35
RNF111-211ENST00000560952 SCUBE2Q9NQ36 999 aa6.62□□□□□ -1.35
RNF111-211ENST00000560952 SLC4A2P04920 1241 aa6.61□□□□□ -1.35
RNF111-211ENST00000560952 POLA2Q14181 598 aa6.59□□□□□ -1.35
RNF111-211ENST00000560952 FOXD4L1Q9NU39 408 aa6.59□□□□□ -1.35
RNF111-211ENST00000560952 MYCNP04198 464 aaPredicted RBP6.56□□□□□ -1.36
RNF111-211ENST00000560952 CD44P16070 742 aaKnown RBP6.53□□□□□ -1.36
RNF111-211ENST00000560952 SPDYE1Q8NFV5 336 aaPredicted RBP6.5□□□□□ -1.37
RNF111-211ENST00000560952 C7P10643 843 aa6.45□□□□□ -1.38
RNF111-211ENST00000560952 ZNF579Q8NAF0 562 aaKnown RBP6.44□□□□□ -1.38
RNF111-211ENST00000560952 ZBTB22O15209 634 aa6.43□□□□□ -1.38
RNF111-211ENST00000560952 SLC39A7Q92504 469 aa6.43□□□□□ -1.38
RNF111-211ENST00000560952 ATXN8OSP0DMR3 200 aa6.42□□□□□ -1.38
RNF111-211ENST00000560952 EHMT2Q96KQ7 1210 aa6.41□□□□□ -1.38
RNF111-211ENST00000560952 CSRNP3Q8WYN3 585 aa6.38□□□□□ -1.39
RNF111-211ENST00000560952 OSCARQ8IYS5 282 aa6.37□□□□□ -1.39
RNF111-211ENST00000560952 METRNQ9UJH8 293 aa6.35□□□□□ -1.39
RNF111-211ENST00000560952 CLEC11AQ9Y240 323 aa6.35□□□□□ -1.39
RNF111-211ENST00000560952 TMEM121BQ9BXQ6 578 aaPredicted RBP6.35□□□□□ -1.39
RNF111-211ENST00000560952 POTEJP0CG39 1038 aa6.31□□□□□ -1.4
RNF111-211ENST00000560952 ST18O60284 1047 aa6.27□□□□□ -1.41
RNF111-211ENST00000560952 SPDYE2BA6NHP3 402 aa6.25□□□□□ -1.41
RNF111-211ENST00000560952 SPDYE6P0CI01 402 aa6.25□□□□□ -1.41
RNF111-211ENST00000560952 SPDYE2Q495Y8 402 aa6.25□□□□□ -1.41
RNF111-211ENST00000560952 ATF5Q9Y2D1 282 aaPredicted RBP6.25□□□□□ -1.41
RNF111-211ENST00000560952 CHADLQ6NUI6 762 aa6.24□□□□□ -1.41
RNF111-211ENST00000560952 GALR2O43603 387 aaPredicted RBP6.23□□□□□ -1.41
RNF111-211ENST00000560952 ZRANB1Q9UGI0 708 aa6.22□□□□□ -1.41
RNF111-211ENST00000560952 FARP1Q9Y4F1 1045 aaPredicted RBP6.21□□□□□ -1.42
RNF111-211ENST00000560952 PELP1Q8IZL8 1130 aaKnown RBP6.19□□□□□ -1.42
RNF111-211ENST00000560952 ASTLQ6HA08 431 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms