RNA–Protein interactions for RNA: ENST00000560898.5

NUSAP1-213, Transcript of nucleolar and spindle associated protein 1, humanhuman

TSL 3

Gene NUSAP1, Length 708 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-213ENST00000560898 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
NUSAP1-213ENST00000560898 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
NUSAP1-213ENST00000560898 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
NUSAP1-213ENST00000560898 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
NUSAP1-213ENST00000560898 FOXD1Q16676 465 aa21.48■■□□□ 1.03
NUSAP1-213ENST00000560898 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
NUSAP1-213ENST00000560898 MSH5O43196 834 aa20.21■□□□□ 0.83
NUSAP1-213ENST00000560898 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
NUSAP1-213ENST00000560898 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
NUSAP1-213ENST00000560898 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
NUSAP1-213ENST00000560898 PPP6R1Q9UPN7 881 aa19.93■□□□□ 0.78
NUSAP1-213ENST00000560898 ADRA2BP18089 450 aa19.87■□□□□ 0.77
NUSAP1-213ENST00000560898 ABCC9O60706 1549 aa19.61■□□□□ 0.73
NUSAP1-213ENST00000560898 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
NUSAP1-213ENST00000560898 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
NUSAP1-213ENST00000560898 DNAJC5Q9H3Z4 198 aa18.56■□□□□ 0.56
NUSAP1-213ENST00000560898 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
NUSAP1-213ENST00000560898 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
NUSAP1-213ENST00000560898 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
NUSAP1-213ENST00000560898 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
NUSAP1-213ENST00000560898 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
NUSAP1-213ENST00000560898 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
NUSAP1-213ENST00000560898 NACADO15069 1562 aa17.79■□□□□ 0.44
NUSAP1-213ENST00000560898 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
NUSAP1-213ENST00000560898 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
NUSAP1-213ENST00000560898 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
NUSAP1-213ENST00000560898 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
NUSAP1-213ENST00000560898 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
NUSAP1-213ENST00000560898 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
NUSAP1-213ENST00000560898 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
NUSAP1-213ENST00000560898 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
NUSAP1-213ENST00000560898 CUX2O14529 1486 aa17.39■□□□□ 0.37
NUSAP1-213ENST00000560898 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
NUSAP1-213ENST00000560898 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
NUSAP1-213ENST00000560898 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
NUSAP1-213ENST00000560898 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
NUSAP1-213ENST00000560898 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
NUSAP1-213ENST00000560898 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
NUSAP1-213ENST00000560898 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
NUSAP1-213ENST00000560898 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
NUSAP1-213ENST00000560898 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
NUSAP1-213ENST00000560898 C1QBPQ07021 282 aaKnown RBP16.97■□□□□ 0.31
NUSAP1-213ENST00000560898 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
NUSAP1-213ENST00000560898 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
NUSAP1-213ENST00000560898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.274e-7■■□□□ 14.2
NUSAP1-213ENST00000560898 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
NUSAP1-213ENST00000560898 NESP48681 1621 aa16.52■□□□□ 0.24
NUSAP1-213ENST00000560898 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
NUSAP1-213ENST00000560898 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
NUSAP1-213ENST00000560898 SMARCA2P51531 1590 aa16.44■□□□□ 0.22
NUSAP1-213ENST00000560898 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
NUSAP1-213ENST00000560898 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
NUSAP1-213ENST00000560898 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
NUSAP1-213ENST00000560898 RIMBP3CA6NJZ7 1639 aa16.36■□□□□ 0.21
NUSAP1-213ENST00000560898 RIMBP3BA6NNM3 1639 aa16.36■□□□□ 0.21
NUSAP1-213ENST00000560898 RIMBP3Q9UFD9 1639 aa16.36■□□□□ 0.21
NUSAP1-213ENST00000560898 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
NUSAP1-213ENST00000560898 KCNA4P22459 653 aa16.29■□□□□ 0.2
NUSAP1-213ENST00000560898 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
NUSAP1-213ENST00000560898 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
NUSAP1-213ENST00000560898 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
NUSAP1-213ENST00000560898 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
NUSAP1-213ENST00000560898 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
NUSAP1-213ENST00000560898 ARHGEF11O15085 1522 aa16.15■□□□□ 0.18
NUSAP1-213ENST00000560898 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
NUSAP1-213ENST00000560898 WDR62O43379 1518 aa16.14■□□□□ 0.18
NUSAP1-213ENST00000560898 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
NUSAP1-213ENST00000560898 CAPN15O75808 1086 aa16.12■□□□□ 0.17
NUSAP1-213ENST00000560898 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
NUSAP1-213ENST00000560898 ILDR1Q86SU0 546 aaPredicted RBP16.1■□□□□ 0.17
NUSAP1-213ENST00000560898 DSG3P32926 999 aa16.05■□□□□ 0.16
NUSAP1-213ENST00000560898 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
NUSAP1-213ENST00000560898 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
NUSAP1-213ENST00000560898 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
NUSAP1-213ENST00000560898 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
NUSAP1-213ENST00000560898 APLP2Q06481 763 aa15.92■□□□□ 0.14
NUSAP1-213ENST00000560898 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
NUSAP1-213ENST00000560898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
NUSAP1-213ENST00000560898 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
NUSAP1-213ENST00000560898 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
NUSAP1-213ENST00000560898 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
NUSAP1-213ENST00000560898 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
NUSAP1-213ENST00000560898 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
NUSAP1-213ENST00000560898 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
NUSAP1-213ENST00000560898 ABCB7O75027 752 aa15.72■□□□□ 0.11
NUSAP1-213ENST00000560898 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
NUSAP1-213ENST00000560898 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
NUSAP1-213ENST00000560898 CHD1O14646 1710 aa15.68■□□□□ 0.1
NUSAP1-213ENST00000560898 URB2Q14146 1524 aaKnown RBP15.64■□□□□ 0.09
NUSAP1-213ENST00000560898 POTEHQ6S545 545 aa15.63■□□□□ 0.09
NUSAP1-213ENST00000560898 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
NUSAP1-213ENST00000560898 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
NUSAP1-213ENST00000560898 MYCNP04198 464 aaPredicted RBP15.55■□□□□ 0.08
NUSAP1-213ENST00000560898 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
NUSAP1-213ENST00000560898 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
NUSAP1-213ENST00000560898 CFTRP13569 1480 aa15.43■□□□□ 0.06
NUSAP1-213ENST00000560898 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
NUSAP1-213ENST00000560898 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
NUSAP1-213ENST00000560898 FBLN2P98095 1184 aa15.4■□□□□ 0.06
NUSAP1-213ENST00000560898 ERCC6L2Q5T890 1561 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms