RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
IDH3A-220ENST00000560667 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
IDH3A-220ENST00000560667 ABCC9O60706 1549 aa14.43□□□□□ -0.1
IDH3A-220ENST00000560667 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
IDH3A-220ENST00000560667 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
IDH3A-220ENST00000560667 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
IDH3A-220ENST00000560667 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
IDH3A-220ENST00000560667 NACADO15069 1562 aa13.75□□□□□ -0.21
IDH3A-220ENST00000560667 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
IDH3A-220ENST00000560667 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
IDH3A-220ENST00000560667 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
IDH3A-220ENST00000560667 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
IDH3A-220ENST00000560667 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
IDH3A-220ENST00000560667 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
IDH3A-220ENST00000560667 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
IDH3A-220ENST00000560667 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
IDH3A-220ENST00000560667 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
IDH3A-220ENST00000560667 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
IDH3A-220ENST00000560667 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.3
IDH3A-220ENST00000560667 WIZO95785 1651 aa13.08□□□□□ -0.31
IDH3A-220ENST00000560667 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
IDH3A-220ENST00000560667 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
IDH3A-220ENST00000560667 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
IDH3A-220ENST00000560667 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
IDH3A-220ENST00000560667 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
IDH3A-220ENST00000560667 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
IDH3A-220ENST00000560667 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
IDH3A-220ENST00000560667 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
IDH3A-220ENST00000560667 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
IDH3A-220ENST00000560667 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
IDH3A-220ENST00000560667 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
IDH3A-220ENST00000560667 NCAPD3P42695 1498 aa12.77□□□□□ -0.36
IDH3A-220ENST00000560667 HMGXB3Q12766 1538 aa12.65□□□□□ -0.38
IDH3A-220ENST00000560667 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
IDH3A-220ENST00000560667 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
IDH3A-220ENST00000560667 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
IDH3A-220ENST00000560667 NESP48681 1621 aa12.52□□□□□ -0.41
IDH3A-220ENST00000560667 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
IDH3A-220ENST00000560667 CADPSQ9ULU8 1353 aa12.48□□□□□ -0.41
IDH3A-220ENST00000560667 CFTRP13569 1480 aa12.48□□□□□ -0.41
IDH3A-220ENST00000560667 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
IDH3A-220ENST00000560667 LOC105371045A0A1W2PR82 267 aa12.46□□□□□ -0.42
IDH3A-220ENST00000560667 CUX2O14529 1486 aa12.44□□□□□ -0.42
IDH3A-220ENST00000560667 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
IDH3A-220ENST00000560667 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.43
IDH3A-220ENST00000560667 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
IDH3A-220ENST00000560667 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
IDH3A-220ENST00000560667 SOGA1O94964 1423 aa12.34□□□□□ -0.43
IDH3A-220ENST00000560667 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
IDH3A-220ENST00000560667 CUX1P39880 1505 aa12.32□□□□□ -0.44
IDH3A-220ENST00000560667 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
IDH3A-220ENST00000560667 TOP2BQ02880 1626 aa12.24□□□□□ -0.45
IDH3A-220ENST00000560667 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
IDH3A-220ENST00000560667 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
IDH3A-220ENST00000560667 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
IDH3A-220ENST00000560667 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
IDH3A-220ENST00000560667 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
IDH3A-220ENST00000560667 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
IDH3A-220ENST00000560667 THOC2Q8NI27 1593 aaKnown RBP12.2□□□□□ -0.46
IDH3A-220ENST00000560667 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
IDH3A-220ENST00000560667 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
IDH3A-220ENST00000560667 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
IDH3A-220ENST00000560667 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
IDH3A-220ENST00000560667 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
IDH3A-220ENST00000560667 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
IDH3A-220ENST00000560667 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
IDH3A-220ENST00000560667 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
IDH3A-220ENST00000560667 IGF1RP08069 1367 aa12.08□□□□□ -0.48
IDH3A-220ENST00000560667 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
IDH3A-220ENST00000560667 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
IDH3A-220ENST00000560667 KIF27Q86VH2 1401 aa12.06□□□□□ -0.48
IDH3A-220ENST00000560667 WDR62O43379 1518 aa12.04□□□□□ -0.48
IDH3A-220ENST00000560667 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
IDH3A-220ENST00000560667 EEA1Q15075 1411 aa12.04□□□□□ -0.48
IDH3A-220ENST00000560667 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■■■■ 26.9
IDH3A-220ENST00000560667 ABCA10Q8WWZ4 1543 aa12.01□□□□□ -0.49
IDH3A-220ENST00000560667 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
IDH3A-220ENST00000560667 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
IDH3A-220ENST00000560667 PRXQ9BXM0 1461 aa11.99□□□□□ -0.49
IDH3A-220ENST00000560667 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
IDH3A-220ENST00000560667 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
IDH3A-220ENST00000560667 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
IDH3A-220ENST00000560667 PPARGC1BQ86YN6 1023 aaKnown RBP11.94□□□□□ -0.5
IDH3A-220ENST00000560667 TNIKQ9UKE5 1360 aa11.94□□□□□ -0.5
IDH3A-220ENST00000560667 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
IDH3A-220ENST00000560667 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
IDH3A-220ENST00000560667 KIF21BO75037 1637 aa11.92□□□□□ -0.5
IDH3A-220ENST00000560667 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
IDH3A-220ENST00000560667 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
IDH3A-220ENST00000560667 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
IDH3A-220ENST00000560667 FBLN2P98095 1184 aa11.86□□□□□ -0.51
IDH3A-220ENST00000560667 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
IDH3A-220ENST00000560667 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
IDH3A-220ENST00000560667 EIF4G3O43432 1585 aaKnown RBP11.83□□□□□ -0.52
IDH3A-220ENST00000560667 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
IDH3A-220ENST00000560667 CLIP1P30622 1438 aa11.82□□□□□ -0.52
IDH3A-220ENST00000560667 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
IDH3A-220ENST00000560667 SNAPC4Q5SXM2 1469 aa11.81□□□□□ -0.52
IDH3A-220ENST00000560667 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
IDH3A-220ENST00000560667 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms