RNA–Protein interactions for RNA: ENST00000560657.1

PCK2-213, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 3

Gene PCK2, Length 559 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-213ENST00000560657 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
PCK2-213ENST00000560657 CCDC180Q9P1Z9 1646 aa39.04■■■■□ 3.84
PCK2-213ENST00000560657 ABCC9O60706 1549 aa38.17■■■■□ 3.7
PCK2-213ENST00000560657 RB1CC1Q8TDY2 1594 aa36.7■■■■□ 3.47
PCK2-213ENST00000560657 NACADO15069 1562 aa36.69■■■■□ 3.46
PCK2-213ENST00000560657 ZCCHC6Q5VYS8 1495 aaKnown RBP36.57■■■■□ 3.45
PCK2-213ENST00000560657 MYO15BQ96JP2 1530 aa36.52■■■■□ 3.44
PCK2-213ENST00000560657 DCAF8L2P0C7V8 631 aa36.41■■■■□ 3.42
PCK2-213ENST00000560657 DCAF1Q9Y4B6 1507 aa36.34■■■■□ 3.41
PCK2-213ENST00000560657 UNC13AQ9UPW8 1703 aa36.02■■■■□ 3.36
PCK2-213ENST00000560657 BICRAQ9NZM4 1560 aa35.75■■■■□ 3.31
PCK2-213ENST00000560657 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
PCK2-213ENST00000560657 SCRIBQ14160 1630 aa35.57■■■■□ 3.28
PCK2-213ENST00000560657 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
PCK2-213ENST00000560657 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
PCK2-213ENST00000560657 EIF4G1Q04637 1599 aaKnown RBP34.71■■■■□ 3.15
PCK2-213ENST00000560657 CC2D2AQ9P2K1 1620 aa34.58■■■■□ 3.13
PCK2-213ENST00000560657 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
PCK2-213ENST00000560657 SMARCA4P51532 1647 aa34.07■■■■□ 3.04
PCK2-213ENST00000560657 BAZ1AQ9NRL2 1556 aaPredicted RBP33.97■■■■□ 3.03
PCK2-213ENST00000560657 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
PCK2-213ENST00000560657 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
PCK2-213ENST00000560657 MROH2BQ7Z745 1585 aa33.84■■■■□ 3.01
PCK2-213ENST00000560657 SMARCA2P51531 1590 aa33.79■■■■□ 3
PCK2-213ENST00000560657 PEG3Q9GZU2 1588 aa33.79■■■■□ 3
PCK2-213ENST00000560657 HMGXB3Q12766 1538 aa33.71■■■□□ 2.99
PCK2-213ENST00000560657 BAZ1BQ9UIG0 1483 aaKnown RBP33.52■■■□□ 2.96
PCK2-213ENST00000560657 WIZO95785 1651 aa33.45■■■□□ 2.95
PCK2-213ENST00000560657 RSF1Q96T23 1441 aaPredicted RBP33.42■■■□□ 2.94
PCK2-213ENST00000560657 TOP2AP11388 1531 aaKnown RBP33.08■■■□□ 2.89
PCK2-213ENST00000560657 NESP48681 1621 aa33.08■■■□□ 2.89
PCK2-213ENST00000560657 LAMC3Q9Y6N6 1575 aa32.96■■■□□ 2.87
PCK2-213ENST00000560657 CADPSQ9ULU8 1353 aa32.83■■■□□ 2.85
PCK2-213ENST00000560657 ERCC6Q03468 1493 aa32.81■■■□□ 2.84
PCK2-213ENST00000560657 KIF21AQ7Z4S6 1674 aa32.69■■■□□ 2.82
PCK2-213ENST00000560657 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
PCK2-213ENST00000560657 CFTRP13569 1480 aa32.68■■■□□ 2.82
PCK2-213ENST00000560657 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
PCK2-213ENST00000560657 THOC2Q8NI27 1593 aaKnown RBP32.63■■■□□ 2.81
PCK2-213ENST00000560657 CUX2O14529 1486 aa32.59■■■□□ 2.81
PCK2-213ENST00000560657 FANCD2Q9BXW9 1451 aa32.46■■■□□ 2.79
PCK2-213ENST00000560657 PRDM2Q13029 1718 aa32.45■■■□□ 2.78
PCK2-213ENST00000560657 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
PCK2-213ENST00000560657 MRC2Q9UBG0 1479 aa32.39■■■□□ 2.78
PCK2-213ENST00000560657 WDR62O43379 1518 aa32.34■■■□□ 2.77
PCK2-213ENST00000560657 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
PCK2-213ENST00000560657 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
PCK2-213ENST00000560657 TOPBP1Q92547 1522 aa31.97■■■□□ 2.71
PCK2-213ENST00000560657 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
PCK2-213ENST00000560657 ABCC8Q09428 1581 aa31.89■■■□□ 2.7
PCK2-213ENST00000560657 CUX1P39880 1505 aa31.75■■■□□ 2.67
PCK2-213ENST00000560657 IFT140Q96RY7 1462 aa31.73■■■□□ 2.67
PCK2-213ENST00000560657 POLA1P09884 1462 aaPredicted RBP31.7■■■□□ 2.66
PCK2-213ENST00000560657 TARBP1Q13395 1621 aaKnown RBP31.68■■■□□ 2.66
PCK2-213ENST00000560657 ZNF608Q9ULD9 1512 aaPredicted RBP31.66■■■□□ 2.66
PCK2-213ENST00000560657 DNAJC5Q9H3Z4 198 aa31.64■■■□□ 2.66
PCK2-213ENST00000560657 FGD5Q6ZNL6 1462 aa31.59■■■□□ 2.65
PCK2-213ENST00000560657 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
PCK2-213ENST00000560657 EIF4G3O43432 1585 aaKnown RBP31.52■■■□□ 2.64
PCK2-213ENST00000560657 SOGA1O94964 1423 aa31.49■■■□□ 2.63
PCK2-213ENST00000560657 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
PCK2-213ENST00000560657 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
PCK2-213ENST00000560657 TOP2BQ02880 1626 aa31.44■■■□□ 2.62
PCK2-213ENST00000560657 WRNQ14191 1432 aaPredicted RBP eCLIP31.43■■■□□ 2.62
PCK2-213ENST00000560657 WDR97A6NE52 1622 aa31.43■■■□□ 2.62
PCK2-213ENST00000560657 AQRO60306 1485 aaKnown RBP eCLIP31.43■■■□□ 2.621e-10■■■■■ 38
PCK2-213ENST00000560657 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
PCK2-213ENST00000560657 ABCA10Q8WWZ4 1543 aa31.31■■■□□ 2.6
PCK2-213ENST00000560657 ABCA5Q8WWZ7 1642 aa31.23■■■□□ 2.59
PCK2-213ENST00000560657 GRIN2BQ13224 1484 aa31.15■■■□□ 2.58
PCK2-213ENST00000560657 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
PCK2-213ENST00000560657 PBRM1Q86U86 1689 aa31.14■■■□□ 2.58
PCK2-213ENST00000560657 CHD1O14646 1710 aa31.14■■■□□ 2.58
PCK2-213ENST00000560657 SNAPC4Q5SXM2 1469 aa31.14■■■□□ 2.57
PCK2-213ENST00000560657 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
PCK2-213ENST00000560657 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
PCK2-213ENST00000560657 SYNJ2O15056 1496 aa30.97■■■□□ 2.55
PCK2-213ENST00000560657 ERICH3Q5RHP9 1530 aa30.91■■■□□ 2.54
PCK2-213ENST00000560657 ADAMTS12P58397 1594 aa30.91■■■□□ 2.54
PCK2-213ENST00000560657 FBLN2P98095 1184 aa30.88■■■□□ 2.53
PCK2-213ENST00000560657 CLASP1Q7Z460 1538 aa30.84■■■□□ 2.53
PCK2-213ENST00000560657 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
PCK2-213ENST00000560657 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
PCK2-213ENST00000560657 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
PCK2-213ENST00000560657 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.52
PCK2-213ENST00000560657 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.52
PCK2-213ENST00000560657 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.52
PCK2-213ENST00000560657 ARHGEF11O15085 1522 aa30.75■■■□□ 2.51
PCK2-213ENST00000560657 KIF27Q86VH2 1401 aa30.74■■■□□ 2.51
PCK2-213ENST00000560657 IGF1RP08069 1367 aa30.71■■■□□ 2.51
PCK2-213ENST00000560657 NUP160Q12769 1436 aa30.69■■■□□ 2.5
PCK2-213ENST00000560657 CEP170Q5SW79 1584 aa30.68■■■□□ 2.5
PCK2-213ENST00000560657 CUL7Q14999 1698 aa30.61■■■□□ 2.49
PCK2-213ENST00000560657 RUSC2Q8N2Y8 1516 aa30.57■■■□□ 2.49
PCK2-213ENST00000560657 ARAP1Q96P48 1450 aa30.53■■■□□ 2.48
PCK2-213ENST00000560657 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
PCK2-213ENST00000560657 SHROOM2Q13796 1616 aa30.5■■■□□ 2.47
PCK2-213ENST00000560657 CARMIL1Q5VZK9 1371 aa30.46■■■□□ 2.47
PCK2-213ENST00000560657 ERCC6L2Q5T890 1561 aa30.42■■■□□ 2.46
PCK2-213ENST00000560657 CYB5RLQ6IPT4 315 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms