RNA–Protein interactions for RNA: ENST00000560623.1

AC066612.1-203, humanhuman

TSL 4 BASIC

Gene AC066612.1, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-203ENST00000560623 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
AC066612.1-203ENST00000560623 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
AC066612.1-203ENST00000560623 ABCC9O60706 1549 aa25.26■■□□□ 1.63
AC066612.1-203ENST00000560623 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
AC066612.1-203ENST00000560623 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
AC066612.1-203ENST00000560623 NACADO15069 1562 aa24.21■■□□□ 1.47
AC066612.1-203ENST00000560623 ZCCHC6Q5VYS8 1495 aaKnown RBP24.17■■□□□ 1.46
AC066612.1-203ENST00000560623 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
AC066612.1-203ENST00000560623 DCAF1Q9Y4B6 1507 aa23.98■■□□□ 1.43
AC066612.1-203ENST00000560623 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
AC066612.1-203ENST00000560623 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
AC066612.1-203ENST00000560623 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
AC066612.1-203ENST00000560623 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
AC066612.1-203ENST00000560623 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
AC066612.1-203ENST00000560623 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
AC066612.1-203ENST00000560623 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
AC066612.1-203ENST00000560623 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
AC066612.1-203ENST00000560623 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
AC066612.1-203ENST00000560623 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
AC066612.1-203ENST00000560623 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
AC066612.1-203ENST00000560623 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
AC066612.1-203ENST00000560623 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
AC066612.1-203ENST00000560623 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
AC066612.1-203ENST00000560623 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
AC066612.1-203ENST00000560623 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
AC066612.1-203ENST00000560623 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
AC066612.1-203ENST00000560623 WIZO95785 1651 aa22.2■■□□□ 1.14
AC066612.1-203ENST00000560623 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
AC066612.1-203ENST00000560623 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.14
AC066612.1-203ENST00000560623 NESP48681 1621 aa21.9■■□□□ 1.1
AC066612.1-203ENST00000560623 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
AC066612.1-203ENST00000560623 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
AC066612.1-203ENST00000560623 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
AC066612.1-203ENST00000560623 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
AC066612.1-203ENST00000560623 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
AC066612.1-203ENST00000560623 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
AC066612.1-203ENST00000560623 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
AC066612.1-203ENST00000560623 CFTRP13569 1480 aa21.59■■□□□ 1.05
AC066612.1-203ENST00000560623 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
AC066612.1-203ENST00000560623 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
AC066612.1-203ENST00000560623 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
AC066612.1-203ENST00000560623 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
AC066612.1-203ENST00000560623 CUX2O14529 1486 aa21.45■■□□□ 1.03
AC066612.1-203ENST00000560623 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
AC066612.1-203ENST00000560623 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
AC066612.1-203ENST00000560623 WDR62O43379 1518 aa21.33■■□□□ 1
AC066612.1-203ENST00000560623 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
AC066612.1-203ENST00000560623 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
AC066612.1-203ENST00000560623 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
AC066612.1-203ENST00000560623 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
AC066612.1-203ENST00000560623 CUX1P39880 1505 aa21.01■□□□□ 0.95
AC066612.1-203ENST00000560623 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
AC066612.1-203ENST00000560623 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
AC066612.1-203ENST00000560623 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
AC066612.1-203ENST00000560623 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
AC066612.1-203ENST00000560623 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
AC066612.1-203ENST00000560623 RAD54L2Q9Y4B4 1467 aa20.91■□□□□ 0.94
AC066612.1-203ENST00000560623 SOGA1O94964 1423 aa20.87■□□□□ 0.93
AC066612.1-203ENST00000560623 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
AC066612.1-203ENST00000560623 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.93
AC066612.1-203ENST00000560623 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
AC066612.1-203ENST00000560623 AQRO60306 1485 aaKnown RBP eCLIP20.82■□□□□ 0.92
AC066612.1-203ENST00000560623 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
AC066612.1-203ENST00000560623 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
AC066612.1-203ENST00000560623 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
AC066612.1-203ENST00000560623 TDRD9Q8NDG6 1382 aaKnown RBP20.78■□□□□ 0.92
AC066612.1-203ENST00000560623 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
AC066612.1-203ENST00000560623 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
AC066612.1-203ENST00000560623 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
AC066612.1-203ENST00000560623 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
AC066612.1-203ENST00000560623 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
AC066612.1-203ENST00000560623 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
AC066612.1-203ENST00000560623 CHD1O14646 1710 aa20.6■□□□□ 0.89
AC066612.1-203ENST00000560623 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
AC066612.1-203ENST00000560623 SNAPC4Q5SXM2 1469 aa20.58■□□□□ 0.89
AC066612.1-203ENST00000560623 FBLN2P98095 1184 aa20.53■□□□□ 0.88
AC066612.1-203ENST00000560623 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
AC066612.1-203ENST00000560623 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
AC066612.1-203ENST00000560623 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
AC066612.1-203ENST00000560623 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
AC066612.1-203ENST00000560623 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
AC066612.1-203ENST00000560623 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
AC066612.1-203ENST00000560623 IGF1RP08069 1367 aa20.37■□□□□ 0.85
AC066612.1-203ENST00000560623 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
AC066612.1-203ENST00000560623 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
AC066612.1-203ENST00000560623 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
AC066612.1-203ENST00000560623 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
AC066612.1-203ENST00000560623 GRIN2AQ12879 1464 aa20.34■□□□□ 0.85
AC066612.1-203ENST00000560623 RIMBP3CA6NJZ7 1639 aa20.31■□□□□ 0.84
AC066612.1-203ENST00000560623 RIMBP3BA6NNM3 1639 aa20.31■□□□□ 0.84
AC066612.1-203ENST00000560623 RIMBP3Q9UFD9 1639 aa20.31■□□□□ 0.84
AC066612.1-203ENST00000560623 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
AC066612.1-203ENST00000560623 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
AC066612.1-203ENST00000560623 NUP160Q12769 1436 aa20.27■□□□□ 0.83
AC066612.1-203ENST00000560623 CUL7Q14999 1698 aa20.23■□□□□ 0.83
AC066612.1-203ENST00000560623 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
AC066612.1-203ENST00000560623 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
AC066612.1-203ENST00000560623 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
AC066612.1-203ENST00000560623 ERCC6L2Q5T890 1561 aa20.13■□□□□ 0.81
AC066612.1-203ENST00000560623 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms