RNA–Protein interactions for RNA: ENST00000560618.5

CIB2-208, Transcript of calcium and integrin binding family member 2, human

TSL 2 BASIC

Gene CIB2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIB2-208	ENST00000560618	NISCH	Q9Y2I1	1504 aa		44.46	■■■■■ 4.71
CIB2-208	ENST00000560618	CCDC180	Q9P1Z9	1646 aa		39.74	■■■■□ 3.95
CIB2-208	ENST00000560618	ABCC9	O60706	1549 aa		39.09	■■■■□ 3.85
CIB2-208	ENST00000560618	RB1CC1	Q8TDY2	1594 aa		37.5	■■■■□ 3.59
CIB2-208	ENST00000560618	NACAD	O15069	1562 aa		37.38	■■■■□ 3.57
CIB2-208	ENST00000560618	DCAF8L2	P0C7V8	631 aa		37.12	■■■■□ 3.53
CIB2-208	ENST00000560618	MYO15B	Q96JP2	1530 aa		37.06	■■■■□ 3.52
CIB2-208	ENST00000560618	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.01	■■■■□ 3.51
CIB2-208	ENST00000560618	DCAF1	Q9Y4B6	1507 aa		36.8	■■■■□ 3.48
CIB2-208	ENST00000560618	UNC13A	Q9UPW8	1703 aa		36.69	■■■■□ 3.46
CIB2-208	ENST00000560618	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.4	■■■■□ 3.42
CIB2-208	ENST00000560618	BICRA	Q9NZM4	1560 aa		36.4	■■■■□ 3.42
CIB2-208	ENST00000560618	SCRIB	Q14160	1630 aa		36.2	■■■■□ 3.39
CIB2-208	ENST00000560618	DNAJC5B	Q9UF47	199 aa		36.08	■■■■□ 3.37
CIB2-208	ENST00000560618	SHROOM4	Q9ULL8	1493 aa		36	■■■■□ 3.35
CIB2-208	ENST00000560618	EIF4G1	Q04637	1599 aa	Known RBP	35.45	■■■■□ 3.27
CIB2-208	ENST00000560618	CC2D2A	Q9P2K1	1620 aa		35.37	■■■■□ 3.25
CIB2-208	ENST00000560618	CECR2	Q9BXF3	1484 aa		35.16	■■■■□ 3.22
CIB2-208	ENST00000560618	SMARCA4	P51532	1647 aa		34.6	■■■■□ 3.13
CIB2-208	ENST00000560618	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.5	■■■■□ 3.11
CIB2-208	ENST00000560618	NCAPD3	P42695	1498 aa		34.46	■■■■□ 3.11
CIB2-208	ENST00000560618	ATAD2B	Q9ULI0	1458 aa		34.44	■■■■□ 3.1
CIB2-208	ENST00000560618	SMARCA2	P51531	1590 aa		34.41	■■■■□ 3.1
CIB2-208	ENST00000560618	HMGXB3	Q12766	1538 aa		34.33	■■■■□ 3.09
CIB2-208	ENST00000560618	PEG3	Q9GZU2	1588 aa		34.28	■■■■□ 3.08
CIB2-208	ENST00000560618	MROH2B	Q7Z745	1585 aa		34.26	■■■■□ 3.07
CIB2-208	ENST00000560618	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.16	■■■■□ 3.06
CIB2-208	ENST00000560618	WIZ	O95785	1651 aa		33.9	■■■■□ 3.02
CIB2-208	ENST00000560618	NES	P48681	1621 aa		33.74	■■■□□ 2.99
CIB2-208	ENST00000560618	RSF1	Q96T23	1441 aa	Predicted RBP	33.73	■■■□□ 2.99
CIB2-208	ENST00000560618	ERCC6	Q03468	1493 aa		33.71	■■■□□ 2.99
CIB2-208	ENST00000560618	LAMC3	Q9Y6N6	1575 aa		33.64	■■■□□ 2.98
CIB2-208	ENST00000560618	TOP2A	P11388	1531 aa	Known RBP	33.53	■■■□□ 2.96
CIB2-208	ENST00000560618	CUX2	O14529	1486 aa		33.49	■■■□□ 2.95
CIB2-208	ENST00000560618	CADPS	Q9ULU8	1353 aa		33.41	■■■□□ 2.94
CIB2-208	ENST00000560618	KIF21A	Q7Z4S6	1674 aa		33.4	■■■□□ 2.94
CIB2-208	ENST00000560618	THOC2	Q8NI27	1593 aa	Known RBP	33.37	■■■□□ 2.93
CIB2-208	ENST00000560618	PDS5B	Q9NTI5	1447 aa		33.36	■■■□□ 2.93
CIB2-208	ENST00000560618	CFTR	P13569	1480 aa		33.19	■■■□□ 2.9
CIB2-208	ENST00000560618	MRC2	Q9UBG0	1479 aa		33.1	■■■□□ 2.89
CIB2-208	ENST00000560618	CCDC88B	A6NC98	1476 aa		33.08	■■■□□ 2.89
CIB2-208	ENST00000560618	CEP164	Q9UPV0	1460 aa		33.07	■■■□□ 2.88
CIB2-208	ENST00000560618	FANCD2	Q9BXW9	1451 aa		33.06	■■■□□ 2.88
CIB2-208	ENST00000560618	WDR62	O43379	1518 aa		33.02	■■■□□ 2.88
CIB2-208	ENST00000560618	PRDM2	Q13029	1718 aa		33.01	■■■□□ 2.87
CIB2-208	ENST00000560618	URB2	Q14146	1524 aa	Known RBP	32.77	■■■□□ 2.84
CIB2-208	ENST00000560618	DNAJC5	Q9H3Z4	198 aa		32.72	■■■□□ 2.83
CIB2-208	ENST00000560618	SUPT5H	O00267	1087 aa	Known RBP	32.57	■■■□□ 2.8
CIB2-208	ENST00000560618	TOPBP1	Q92547	1522 aa		32.51	■■■□□ 2.8
CIB2-208	ENST00000560618	DNMBP	Q6XZF7	1577 aa		32.49	■■■□□ 2.79
CIB2-208	ENST00000560618	ABCC8	Q09428	1581 aa		32.47	■■■□□ 2.79
CIB2-208	ENST00000560618	IFT140	Q96RY7	1462 aa		32.38	■■■□□ 2.77
CIB2-208	ENST00000560618	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.26	■■■□□ 2.76
CIB2-208	ENST00000560618	POLA1	P09884	1462 aa	Predicted RBP	32.23	■■■□□ 2.75
CIB2-208	ENST00000560618	TARBP1	Q13395	1621 aa	Known RBP	32.22	■■■□□ 2.75
CIB2-208	ENST00000560618	EIF4G3	O43432	1585 aa	Known RBP	32.19	■■■□□ 2.74
CIB2-208	ENST00000560618	CUX1	P39880	1505 aa		32.16	■■■□□ 2.74
CIB2-208	ENST00000560618	FGD5	Q6ZNL6	1462 aa		32.1	■■■□□ 2.73
CIB2-208	ENST00000560618	RAD54L2	Q9Y4B4	1467 aa		32.06	■■■□□ 2.72
CIB2-208	ENST00000560618	SOGA1	O94964	1423 aa		32.03	■■■□□ 2.72
CIB2-208	ENST00000560618	AQR	O60306	1485 aa	Known RBP eCLIP	32.01	■■■□□ 2.71
CIB2-208	ENST00000560618	WDR97	A6NE52	1622 aa		31.96	■■■□□ 2.71
CIB2-208	ENST00000560618	OSCAR	Q8IYS5	282 aa		31.94	■■■□□ 2.7
CIB2-208	ENST00000560618	TDRD9	Q8NDG6	1382 aa	Known RBP	31.89	■■■□□ 2.7
CIB2-208	ENST00000560618	BIVM-ERCC5	R4GMW8	1640 aa		31.86	■■■□□ 2.69
CIB2-208	ENST00000560618	CHD1	O14646	1710 aa		31.83	■■■□□ 2.69
CIB2-208	ENST00000560618	TOP2B	Q02880	1626 aa		31.83	■■■□□ 2.69
CIB2-208	ENST00000560618	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.82	■■■□□ 2.68
CIB2-208	ENST00000560618	SYNJ1	O43426	1573 aa		31.81	■■■□□ 2.68
CIB2-208	ENST00000560618	ABCA10	Q8WWZ4	1543 aa		31.78	■■■□□ 2.68
CIB2-208	ENST00000560618	SNAPC4	Q5SXM2	1469 aa		31.75	■■■□□ 2.67
CIB2-208	ENST00000560618	GRIN2B	Q13224	1484 aa		31.74	■■■□□ 2.67
CIB2-208	ENST00000560618	ABCA5	Q8WWZ7	1642 aa		31.73	■■■□□ 2.67
CIB2-208	ENST00000560618	PBRM1	Q86U86	1689 aa		31.72	■■■□□ 2.67
CIB2-208	ENST00000560618	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.7	■■■□□ 2.66
CIB2-208	ENST00000560618	GAPVD1	Q14C86	1478 aa		31.68	■■■□□ 2.66
CIB2-208	ENST00000560618	FBLN2	P98095	1184 aa		31.63	■■■□□ 2.65
CIB2-208	ENST00000560618	RIMBP3C	A6NJZ7	1639 aa		31.59	■■■□□ 2.65
CIB2-208	ENST00000560618	RIMBP3B	A6NNM3	1639 aa		31.59	■■■□□ 2.65
CIB2-208	ENST00000560618	RIMBP3	Q9UFD9	1639 aa		31.59	■■■□□ 2.65
CIB2-208	ENST00000560618	SYNJ2	O15056	1496 aa		31.58	■■■□□ 2.65
CIB2-208	ENST00000560618	ARHGEF11	O15085	1522 aa		31.54	■■■□□ 2.64
CIB2-208	ENST00000560618	TRIM41	Q8WV44	630 aa		31.51	■■■□□ 2.63
CIB2-208	ENST00000560618	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.5	■■■□□ 2.63
CIB2-208	ENST00000560618	CLASP1	Q7Z460	1538 aa		31.47	■■■□□ 2.63
CIB2-208	ENST00000560618	ADAMTS12	P58397	1594 aa		31.44	■■■□□ 2.62
CIB2-208	ENST00000560618	ERICH3	Q5RHP9	1530 aa		31.39	■■■□□ 2.62
CIB2-208	ENST00000560618	GRIN2A	Q12879	1464 aa		31.34	■■■□□ 2.61
CIB2-208	ENST00000560618	FHAD1	B1AJZ9	1412 aa		31.31	■■■□□ 2.6
CIB2-208	ENST00000560618	ARAP1	Q96P48	1450 aa		31.26	■■■□□ 2.59
CIB2-208	ENST00000560618	CEP170	Q5SW79	1584 aa		31.22	■■■□□ 2.59
CIB2-208	ENST00000560618	NUP160	Q12769	1436 aa		31.21	■■■□□ 2.59
CIB2-208	ENST00000560618	KIF27	Q86VH2	1401 aa		31.17	■■■□□ 2.58
CIB2-208	ENST00000560618	CYB5RL	Q6IPT4	315 aa		31.15	■■■□□ 2.58
CIB2-208	ENST00000560618	CUL7	Q14999	1698 aa		31.09	■■■□□ 2.57
CIB2-208	ENST00000560618	SHROOM2	Q13796	1616 aa		31.06	■■■□□ 2.56
CIB2-208	ENST00000560618	IGF1R	P08069	1367 aa		31.05	■■■□□ 2.56
CIB2-208	ENST00000560618	RUSC2	Q8N2Y8	1516 aa		31	■■■□□ 2.55
CIB2-208	ENST00000560618	ERCC6L2	Q5T890	1561 aa		31	■■■□□ 2.55
CIB2-208	ENST00000560618	CARMIL1	Q5VZK9	1371 aa		30.86	■■■□□ 2.53

Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms