RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 NISCHQ9Y2I1 1504 aa30.35■■■□□ 2.45
MARK3-221ENST00000560603 ABCC9O60706 1549 aa27.51■■■□□ 2
MARK3-221ENST00000560603 CCDC180Q9P1Z9 1646 aa27.32■■□□□ 1.96
MARK3-221ENST00000560603 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
MARK3-221ENST00000560603 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
MARK3-221ENST00000560603 NACADO15069 1562 aa25.91■■□□□ 1.74
MARK3-221ENST00000560603 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
MARK3-221ENST00000560603 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
MARK3-221ENST00000560603 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
MARK3-221ENST00000560603 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
MARK3-221ENST00000560603 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
MARK3-221ENST00000560603 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
MARK3-221ENST00000560603 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
MARK3-221ENST00000560603 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
MARK3-221ENST00000560603 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
MARK3-221ENST00000560603 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
MARK3-221ENST00000560603 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
MARK3-221ENST00000560603 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
MARK3-221ENST00000560603 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
MARK3-221ENST00000560603 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
MARK3-221ENST00000560603 CUX2O14529 1486 aa23.85■■□□□ 1.41
MARK3-221ENST00000560603 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
MARK3-221ENST00000560603 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
MARK3-221ENST00000560603 SMARCA2P51531 1590 aa23.76■■□□□ 1.39
MARK3-221ENST00000560603 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
MARK3-221ENST00000560603 SMARCA4P51532 1647 aa23.7■■□□□ 1.39
MARK3-221ENST00000560603 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
MARK3-221ENST00000560603 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
MARK3-221ENST00000560603 NESP48681 1621 aa23.55■■□□□ 1.36
MARK3-221ENST00000560603 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
MARK3-221ENST00000560603 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
MARK3-221ENST00000560603 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
MARK3-221ENST00000560603 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
MARK3-221ENST00000560603 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
MARK3-221ENST00000560603 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
MARK3-221ENST00000560603 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
MARK3-221ENST00000560603 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
MARK3-221ENST00000560603 WIZO95785 1651 aa23.04■■□□□ 1.28
MARK3-221ENST00000560603 WDR62O43379 1518 aa23.02■■□□□ 1.28
MARK3-221ENST00000560603 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
MARK3-221ENST00000560603 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
MARK3-221ENST00000560603 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
MARK3-221ENST00000560603 CFTRP13569 1480 aa22.86■■□□□ 1.25
MARK3-221ENST00000560603 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
MARK3-221ENST00000560603 TOP2AP11388 1531 aaKnown RBP22.78■■□□□ 1.24
MARK3-221ENST00000560603 OSCARQ8IYS5 282 aa22.76■■□□□ 1.23
MARK3-221ENST00000560603 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
MARK3-221ENST00000560603 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
MARK3-221ENST00000560603 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
MARK3-221ENST00000560603 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
MARK3-221ENST00000560603 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
MARK3-221ENST00000560603 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
MARK3-221ENST00000560603 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
MARK3-221ENST00000560603 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.18
MARK3-221ENST00000560603 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.18
MARK3-221ENST00000560603 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.18
MARK3-221ENST00000560603 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
MARK3-221ENST00000560603 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
MARK3-221ENST00000560603 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
MARK3-221ENST00000560603 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.157e-9■■■■□ 20.6
MARK3-221ENST00000560603 TARBP1Q13395 1621 aaKnown RBP22.24■■□□□ 1.15
MARK3-221ENST00000560603 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
MARK3-221ENST00000560603 FBLN2P98095 1184 aa22.21■■□□□ 1.15
MARK3-221ENST00000560603 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
MARK3-221ENST00000560603 CHD1O14646 1710 aa22.17■■□□□ 1.14
MARK3-221ENST00000560603 SOGA1O94964 1423 aa22.14■■□□□ 1.13
MARK3-221ENST00000560603 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
MARK3-221ENST00000560603 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
MARK3-221ENST00000560603 ARAP1Q96P48 1450 aa22.08■■□□□ 1.12
MARK3-221ENST00000560603 TRHP20396 242 aaPredicted RBP22.07■■□□□ 1.12
MARK3-221ENST00000560603 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
MARK3-221ENST00000560603 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
MARK3-221ENST00000560603 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
MARK3-221ENST00000560603 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
MARK3-221ENST00000560603 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
MARK3-221ENST00000560603 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
MARK3-221ENST00000560603 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
MARK3-221ENST00000560603 CUX1P39880 1505 aa21.96■■□□□ 1.11
MARK3-221ENST00000560603 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
MARK3-221ENST00000560603 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
MARK3-221ENST00000560603 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
MARK3-221ENST00000560603 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
MARK3-221ENST00000560603 ABCA10Q8WWZ4 1543 aa21.79■■□□□ 1.08
MARK3-221ENST00000560603 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
MARK3-221ENST00000560603 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
MARK3-221ENST00000560603 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
MARK3-221ENST00000560603 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
MARK3-221ENST00000560603 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
MARK3-221ENST00000560603 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
MARK3-221ENST00000560603 NUP160Q12769 1436 aa21.59■■□□□ 1.05
MARK3-221ENST00000560603 FHAD1B1AJZ9 1412 aa21.58■■□□□ 1.05
MARK3-221ENST00000560603 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
MARK3-221ENST00000560603 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
MARK3-221ENST00000560603 CEP170Q5SW79 1584 aa21.55■■□□□ 1.04
MARK3-221ENST00000560603 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
MARK3-221ENST00000560603 ERICH3Q5RHP9 1530 aa21.52■■□□□ 1.04
MARK3-221ENST00000560603 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
MARK3-221ENST00000560603 PRG4Q92954 1404 aaPredicted RBP21.42■■□□□ 1.02
MARK3-221ENST00000560603 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
MARK3-221ENST00000560603 NPM1P06748 294 aaKnown RBP eCLIP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms