RNA–Protein interactions for RNA: ENST00000560601.1

ACAN-207, Transcript of aggrecan, humanhuman

TSL 3

Gene ACAN, Length 679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-207ENST00000560601 NISCHQ9Y2I1 1504 aa42.88■■■■■ 4.46
ACAN-207ENST00000560601 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
ACAN-207ENST00000560601 ABCC9O60706 1549 aa37.62■■■■□ 3.61
ACAN-207ENST00000560601 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
ACAN-207ENST00000560601 NACADO15069 1562 aa36.09■■■■□ 3.37
ACAN-207ENST00000560601 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
ACAN-207ENST00000560601 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
ACAN-207ENST00000560601 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
ACAN-207ENST00000560601 DCAF1Q9Y4B6 1507 aa35.54■■■■□ 3.28
ACAN-207ENST00000560601 UNC13AQ9UPW8 1703 aa35.15■■■■□ 3.22
ACAN-207ENST00000560601 PABPN1Q86U42 306 aaKnown RBP eCLIP35.1■■■■□ 3.21
ACAN-207ENST00000560601 BICRAQ9NZM4 1560 aa34.96■■■■□ 3.19
ACAN-207ENST00000560601 SCRIBQ14160 1630 aa34.81■■■■□ 3.16
ACAN-207ENST00000560601 SHROOM4Q9ULL8 1493 aa34.8■■■■□ 3.16
ACAN-207ENST00000560601 DNAJC5BQ9UF47 199 aa34.69■■■■□ 3.14
ACAN-207ENST00000560601 EIF4G1Q04637 1599 aaKnown RBP34.13■■■■□ 3.05
ACAN-207ENST00000560601 CC2D2AQ9P2K1 1620 aa34.03■■■■□ 3.04
ACAN-207ENST00000560601 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
ACAN-207ENST00000560601 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
ACAN-207ENST00000560601 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
ACAN-207ENST00000560601 NCAPD3P42695 1498 aa33.29■■■□□ 2.92
ACAN-207ENST00000560601 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
ACAN-207ENST00000560601 ATAD2BQ9ULI0 1458 aa33.22■■■□□ 2.91
ACAN-207ENST00000560601 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
ACAN-207ENST00000560601 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
ACAN-207ENST00000560601 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
ACAN-207ENST00000560601 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
ACAN-207ENST00000560601 WIZO95785 1651 aa32.58■■■□□ 2.81
ACAN-207ENST00000560601 RSF1Q96T23 1441 aaPredicted RBP32.55■■■□□ 2.8
ACAN-207ENST00000560601 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
ACAN-207ENST00000560601 LAMC3Q9Y6N6 1575 aa32.45■■■□□ 2.78
ACAN-207ENST00000560601 NESP48681 1621 aa32.43■■■□□ 2.78
ACAN-207ENST00000560601 CUX2O14529 1486 aa32.33■■■□□ 2.77
ACAN-207ENST00000560601 TOP2AP11388 1531 aaKnown RBP32.32■■■□□ 2.76
ACAN-207ENST00000560601 CADPSQ9ULU8 1353 aa32.3■■■□□ 2.76
ACAN-207ENST00000560601 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
ACAN-207ENST00000560601 CFTRP13569 1480 aa32.04■■■□□ 2.72
ACAN-207ENST00000560601 THOC2Q8NI27 1593 aaKnown RBP32.04■■■□□ 2.72
ACAN-207ENST00000560601 KIF21AQ7Z4S6 1674 aa32.03■■■□□ 2.72
ACAN-207ENST00000560601 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
ACAN-207ENST00000560601 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
ACAN-207ENST00000560601 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
ACAN-207ENST00000560601 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
ACAN-207ENST00000560601 WDR62O43379 1518 aa31.8■■■□□ 2.68
ACAN-207ENST00000560601 PRDM2Q13029 1718 aa31.69■■■□□ 2.66
ACAN-207ENST00000560601 DNAJC5Q9H3Z4 198 aa31.59■■■□□ 2.65
ACAN-207ENST00000560601 URB2Q14146 1524 aaKnown RBP31.54■■■□□ 2.64
ACAN-207ENST00000560601 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
ACAN-207ENST00000560601 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
ACAN-207ENST00000560601 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
ACAN-207ENST00000560601 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
ACAN-207ENST00000560601 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
ACAN-207ENST00000560601 POLA1P09884 1462 aaPredicted RBP31.06■■■□□ 2.56
ACAN-207ENST00000560601 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
ACAN-207ENST00000560601 TARBP1Q13395 1621 aaKnown RBP30.98■■■□□ 2.55
ACAN-207ENST00000560601 CUX1P39880 1505 aa30.97■■■□□ 2.55
ACAN-207ENST00000560601 SOGA1O94964 1423 aa30.96■■■□□ 2.55
ACAN-207ENST00000560601 FGD5Q6ZNL6 1462 aa30.94■■■□□ 2.54
ACAN-207ENST00000560601 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
ACAN-207ENST00000560601 OSCARQ8IYS5 282 aa30.93■■■□□ 2.54
ACAN-207ENST00000560601 RAD54L2Q9Y4B4 1467 aa30.88■■■□□ 2.53
ACAN-207ENST00000560601 WDR97A6NE52 1622 aa30.87■■■□□ 2.53
ACAN-207ENST00000560601 AQRO60306 1485 aaKnown RBP eCLIP30.85■■■□□ 2.53
ACAN-207ENST00000560601 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
ACAN-207ENST00000560601 WRNQ14191 1432 aaPredicted RBP eCLIP30.74■■■□□ 2.51
ACAN-207ENST00000560601 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
ACAN-207ENST00000560601 ABCA10Q8WWZ4 1543 aa30.67■■■□□ 2.5
ACAN-207ENST00000560601 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
ACAN-207ENST00000560601 GRIN2BQ13224 1484 aa30.65■■■□□ 2.5
ACAN-207ENST00000560601 MAGI1Q96QZ7 1491 aaPredicted RBP30.62■■■□□ 2.49
ACAN-207ENST00000560601 GAPVD1Q14C86 1478 aa30.6■■■□□ 2.49
ACAN-207ENST00000560601 SNAPC4Q5SXM2 1469 aa30.59■■■□□ 2.49
ACAN-207ENST00000560601 FBLN2P98095 1184 aa30.59■■■□□ 2.49
ACAN-207ENST00000560601 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
ACAN-207ENST00000560601 CHD1O14646 1710 aa30.53■■■□□ 2.48
ACAN-207ENST00000560601 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
ACAN-207ENST00000560601 CHMP7Q8WUX9 453 aaPredicted RBP30.51■■■□□ 2.47
ACAN-207ENST00000560601 SYNJ2O15056 1496 aa30.49■■■□□ 2.47
ACAN-207ENST00000560601 PBRM1Q86U86 1689 aa30.46■■■□□ 2.47
ACAN-207ENST00000560601 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
ACAN-207ENST00000560601 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
ACAN-207ENST00000560601 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
ACAN-207ENST00000560601 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
ACAN-207ENST00000560601 RIMBP3Q9UFD9 1639 aa30.35■■■□□ 2.45
ACAN-207ENST00000560601 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
ACAN-207ENST00000560601 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
ACAN-207ENST00000560601 FHAD1B1AJZ9 1412 aa30.26■■■□□ 2.43
ACAN-207ENST00000560601 ADAMTS12P58397 1594 aa30.25■■■□□ 2.43
ACAN-207ENST00000560601 GRIN2AQ12879 1464 aa30.23■■■□□ 2.43
ACAN-207ENST00000560601 KIF27Q86VH2 1401 aa30.17■■■□□ 2.42
ACAN-207ENST00000560601 NUP160Q12769 1436 aa30.11■■■□□ 2.41
ACAN-207ENST00000560601 CYB5RLQ6IPT4 315 aa30.1■■■□□ 2.41
ACAN-207ENST00000560601 ARAP1Q96P48 1450 aa30.07■■■□□ 2.4
ACAN-207ENST00000560601 CEP170Q5SW79 1584 aa30.03■■■□□ 2.4
ACAN-207ENST00000560601 IGF1RP08069 1367 aa30.01■■■□□ 2.39
ACAN-207ENST00000560601 CUL7Q14999 1698 aa29.98■■■□□ 2.39
ACAN-207ENST00000560601 SHROOM2Q13796 1616 aa29.88■■■□□ 2.37
ACAN-207ENST00000560601 CARMIL1Q5VZK9 1371 aa29.85■■■□□ 2.37
ACAN-207ENST00000560601 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
ACAN-207ENST00000560601 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms