RNA–Protein interactions for RNA: ENST00000560439.1

AC020687.1-201, humanhuman

TSL 3 BASIC

Gene AC020687.1, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC020687.1-201ENST00000560439 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
AC020687.1-201ENST00000560439 ABCC9O60706 1549 aa16.7■□□□□ 0.26
AC020687.1-201ENST00000560439 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
AC020687.1-201ENST00000560439 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
AC020687.1-201ENST00000560439 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
AC020687.1-201ENST00000560439 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
AC020687.1-201ENST00000560439 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
AC020687.1-201ENST00000560439 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
AC020687.1-201ENST00000560439 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
AC020687.1-201ENST00000560439 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
AC020687.1-201ENST00000560439 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
AC020687.1-201ENST00000560439 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
AC020687.1-201ENST00000560439 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
AC020687.1-201ENST00000560439 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
AC020687.1-201ENST00000560439 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
AC020687.1-201ENST00000560439 NACADO15069 1562 aa15.19■□□□□ 0.02
AC020687.1-201ENST00000560439 BICRAQ9NZM4 1560 aa15.17■□□□□ 0.02
AC020687.1-201ENST00000560439 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
AC020687.1-201ENST00000560439 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
AC020687.1-201ENST00000560439 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
AC020687.1-201ENST00000560439 SCRIBQ14160 1630 aa14.9□□□□□ -0.02
AC020687.1-201ENST00000560439 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
AC020687.1-201ENST00000560439 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
AC020687.1-201ENST00000560439 HRCP23327 699 aa14.6□□□□□ -0.07
AC020687.1-201ENST00000560439 CUX2O14529 1486 aa14.58□□□□□ -0.08
AC020687.1-201ENST00000560439 BAZ1AQ9NRL2 1556 aaPredicted RBP14.58□□□□□ -0.08
AC020687.1-201ENST00000560439 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
AC020687.1-201ENST00000560439 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
AC020687.1-201ENST00000560439 WIZO95785 1651 aa14.48□□□□□ -0.09
AC020687.1-201ENST00000560439 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
AC020687.1-201ENST00000560439 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
AC020687.1-201ENST00000560439 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
AC020687.1-201ENST00000560439 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
AC020687.1-201ENST00000560439 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
AC020687.1-201ENST00000560439 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
AC020687.1-201ENST00000560439 SENP3Q9H4L4 574 aaPredicted RBP14.31□□□□□ -0.12
AC020687.1-201ENST00000560439 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
AC020687.1-201ENST00000560439 PEG3Q9GZU2 1588 aa14.27□□□□□ -0.12
AC020687.1-201ENST00000560439 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
AC020687.1-201ENST00000560439 EEA1Q15075 1411 aa14.2□□□□□ -0.14
AC020687.1-201ENST00000560439 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
AC020687.1-201ENST00000560439 NESP48681 1621 aa14.18□□□□□ -0.14
AC020687.1-201ENST00000560439 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
AC020687.1-201ENST00000560439 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.15
AC020687.1-201ENST00000560439 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
AC020687.1-201ENST00000560439 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
AC020687.1-201ENST00000560439 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
AC020687.1-201ENST00000560439 TNIKQ9UKE5 1360 aa14.01□□□□□ -0.17
AC020687.1-201ENST00000560439 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
AC020687.1-201ENST00000560439 KIF21BO75037 1637 aa13.97□□□□□ -0.17
AC020687.1-201ENST00000560439 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
AC020687.1-201ENST00000560439 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
AC020687.1-201ENST00000560439 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.17
AC020687.1-201ENST00000560439 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
AC020687.1-201ENST00000560439 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
AC020687.1-201ENST00000560439 CEP162Q5TB80 1403 aa13.92□□□□□ -0.18
AC020687.1-201ENST00000560439 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
AC020687.1-201ENST00000560439 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
AC020687.1-201ENST00000560439 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
AC020687.1-201ENST00000560439 SOGA1O94964 1423 aa13.88□□□□□ -0.19
AC020687.1-201ENST00000560439 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
AC020687.1-201ENST00000560439 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
AC020687.1-201ENST00000560439 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
AC020687.1-201ENST00000560439 TOP2BQ02880 1626 aa13.84□□□□□ -0.19
AC020687.1-201ENST00000560439 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
AC020687.1-201ENST00000560439 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
AC020687.1-201ENST00000560439 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
AC020687.1-201ENST00000560439 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
AC020687.1-201ENST00000560439 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
AC020687.1-201ENST00000560439 RUSC2Q8N2Y8 1516 aa13.77□□□□□ -0.21
AC020687.1-201ENST00000560439 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
AC020687.1-201ENST00000560439 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
AC020687.1-201ENST00000560439 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
AC020687.1-201ENST00000560439 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
AC020687.1-201ENST00000560439 WDR62O43379 1518 aa13.72□□□□□ -0.21
AC020687.1-201ENST00000560439 UBTFP17480 764 aaKnown RBP13.7□□□□□ -0.22
AC020687.1-201ENST00000560439 VPS8Q8N3P4 1428 aa13.7□□□□□ -0.22
AC020687.1-201ENST00000560439 CLIP1P30622 1438 aa13.69□□□□□ -0.22
AC020687.1-201ENST00000560439 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
AC020687.1-201ENST00000560439 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
AC020687.1-201ENST00000560439 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
AC020687.1-201ENST00000560439 CFTRP13569 1480 aa13.63□□□□□ -0.23
AC020687.1-201ENST00000560439 PRXQ9BXM0 1461 aa13.62□□□□□ -0.23
AC020687.1-201ENST00000560439 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
AC020687.1-201ENST00000560439 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
AC020687.1-201ENST00000560439 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
AC020687.1-201ENST00000560439 CUX1P39880 1505 aa13.58□□□□□ -0.24
AC020687.1-201ENST00000560439 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
AC020687.1-201ENST00000560439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
AC020687.1-201ENST00000560439 APLP2Q06481 763 aa13.53□□□□□ -0.24
AC020687.1-201ENST00000560439 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
AC020687.1-201ENST00000560439 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
AC020687.1-201ENST00000560439 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
AC020687.1-201ENST00000560439 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
AC020687.1-201ENST00000560439 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
AC020687.1-201ENST00000560439 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
AC020687.1-201ENST00000560439 DIEXFQ68CQ4 756 aaKnown RBP13.41□□□□□ -0.26
AC020687.1-201ENST00000560439 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
AC020687.1-201ENST00000560439 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
AC020687.1-201ENST00000560439 ZNF316A6NFI3 1004 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms