RNA–Protein interactions for RNA: ENST00000560300.1

RORA-213, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-213ENST00000560300 NISCHQ9Y2I1 1504 aa43.39■■■■■ 4.54
RORA-213ENST00000560300 CCDC180Q9P1Z9 1646 aa38.92■■■■□ 3.82
RORA-213ENST00000560300 ABCC9O60706 1549 aa38.84■■■■□ 3.81
RORA-213ENST00000560300 RB1CC1Q8TDY2 1594 aa36.99■■■■□ 3.51
RORA-213ENST00000560300 NACADO15069 1562 aa36.76■■■■□ 3.48
RORA-213ENST00000560300 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
RORA-213ENST00000560300 DNAJC5BQ9UF47 199 aa36.36■■■■□ 3.41
RORA-213ENST00000560300 MYO15BQ96JP2 1530 aa36.28■■■■□ 3.4
RORA-213ENST00000560300 UNC13AQ9UPW8 1703 aa36.22■■■■□ 3.39
RORA-213ENST00000560300 PABPN1Q86U42 306 aaKnown RBP eCLIP36.14■■■■□ 3.38
RORA-213ENST00000560300 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
RORA-213ENST00000560300 BICRAQ9NZM4 1560 aa35.96■■■■□ 3.35
RORA-213ENST00000560300 DCAF1Q9Y4B6 1507 aa35.85■■■■□ 3.33
RORA-213ENST00000560300 SCRIBQ14160 1630 aa35.47■■■■□ 3.27
RORA-213ENST00000560300 SHROOM4Q9ULL8 1493 aa35.43■■■■□ 3.26
RORA-213ENST00000560300 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
RORA-213ENST00000560300 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
RORA-213ENST00000560300 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
RORA-213ENST00000560300 NCAPD3P42695 1498 aa33.93■■■■□ 3.02
RORA-213ENST00000560300 ATAD2BQ9ULI0 1458 aa33.85■■■■□ 3.01
RORA-213ENST00000560300 SMARCA4P51532 1647 aa33.85■■■■□ 3.01
RORA-213ENST00000560300 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
RORA-213ENST00000560300 HMGXB3Q12766 1538 aa33.7■■■□□ 2.99
RORA-213ENST00000560300 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
RORA-213ENST00000560300 PEG3Q9GZU2 1588 aa33.52■■■□□ 2.96
RORA-213ENST00000560300 BAZ1BQ9UIG0 1483 aaKnown RBP33.51■■■□□ 2.96
RORA-213ENST00000560300 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
RORA-213ENST00000560300 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
RORA-213ENST00000560300 CUX2O14529 1486 aa33.43■■■□□ 2.94
RORA-213ENST00000560300 NESP48681 1621 aa33.4■■■□□ 2.94
RORA-213ENST00000560300 DNAJC5Q9H3Z4 198 aa33.3■■■□□ 2.92
RORA-213ENST00000560300 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
RORA-213ENST00000560300 THOC2Q8NI27 1593 aaKnown RBP33.06■■■□□ 2.88
RORA-213ENST00000560300 WIZO95785 1651 aa33.06■■■□□ 2.88
RORA-213ENST00000560300 KIF21AQ7Z4S6 1674 aa32.98■■■□□ 2.87
RORA-213ENST00000560300 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
RORA-213ENST00000560300 CADPSQ9ULU8 1353 aa32.89■■■□□ 2.86
RORA-213ENST00000560300 RSF1Q96T23 1441 aaPredicted RBP32.77■■■□□ 2.84
RORA-213ENST00000560300 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
RORA-213ENST00000560300 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
RORA-213ENST00000560300 WDR62O43379 1518 aa32.61■■■□□ 2.81
RORA-213ENST00000560300 CEP164Q9UPV0 1460 aa32.56■■■□□ 2.8
RORA-213ENST00000560300 CFTRP13569 1480 aa32.55■■■□□ 2.8
RORA-213ENST00000560300 FANCD2Q9BXW9 1451 aa32.54■■■□□ 2.8
RORA-213ENST00000560300 URB2Q14146 1524 aaKnown RBP32.28■■■□□ 2.76
RORA-213ENST00000560300 PRDM2Q13029 1718 aa32.27■■■□□ 2.76
RORA-213ENST00000560300 CCDC88BA6NC98 1476 aa32.25■■■□□ 2.75
RORA-213ENST00000560300 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
RORA-213ENST00000560300 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
RORA-213ENST00000560300 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
RORA-213ENST00000560300 OSCARQ8IYS5 282 aa31.86■■■□□ 2.69
RORA-213ENST00000560300 TRIM41Q8WV44 630 aa31.86■■■□□ 2.69
RORA-213ENST00000560300 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
RORA-213ENST00000560300 DNMBPQ6XZF7 1577 aa31.82■■■□□ 2.68
RORA-213ENST00000560300 EIF4G3O43432 1585 aaKnown RBP31.71■■■□□ 2.67
RORA-213ENST00000560300 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
RORA-213ENST00000560300 POLA1P09884 1462 aaPredicted RBP31.62■■■□□ 2.65
RORA-213ENST00000560300 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.64
RORA-213ENST00000560300 RIMBP3CA6NJZ7 1639 aa31.52■■■□□ 2.64
RORA-213ENST00000560300 RIMBP3BA6NNM3 1639 aa31.52■■■□□ 2.64
RORA-213ENST00000560300 RIMBP3Q9UFD9 1639 aa31.52■■■□□ 2.64
RORA-213ENST00000560300 RAD54L2Q9Y4B4 1467 aa31.5■■■□□ 2.63
RORA-213ENST00000560300 CHD1O14646 1710 aa31.46■■■□□ 2.63
RORA-213ENST00000560300 SOGA1O94964 1423 aa31.44■■■□□ 2.62
RORA-213ENST00000560300 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
RORA-213ENST00000560300 CUX1P39880 1505 aa31.43■■■□□ 2.62
RORA-213ENST00000560300 ARHGEF11O15085 1522 aa31.42■■■□□ 2.62
RORA-213ENST00000560300 TDRD9Q8NDG6 1382 aaKnown RBP31.38■■■□□ 2.61
RORA-213ENST00000560300 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
RORA-213ENST00000560300 SUPT5HO00267 1087 aaKnown RBP31.32■■■□□ 2.6
RORA-213ENST00000560300 FBLN2P98095 1184 aa31.29■■■□□ 2.6
RORA-213ENST00000560300 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
RORA-213ENST00000560300 GRIN2BQ13224 1484 aa31.17■■■□□ 2.58
RORA-213ENST00000560300 MAGI1Q96QZ7 1491 aaPredicted RBP31.17■■■□□ 2.58
RORA-213ENST00000560300 CYB5RLQ6IPT4 315 aa31.13■■■□□ 2.57
RORA-213ENST00000560300 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
RORA-213ENST00000560300 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
RORA-213ENST00000560300 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
RORA-213ENST00000560300 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
RORA-213ENST00000560300 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
RORA-213ENST00000560300 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.56
RORA-213ENST00000560300 SYNJ2O15056 1496 aa31.07■■■□□ 2.56
RORA-213ENST00000560300 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
RORA-213ENST00000560300 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
RORA-213ENST00000560300 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.54
RORA-213ENST00000560300 TOP2BQ02880 1626 aa30.94■■■□□ 2.54
RORA-213ENST00000560300 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
RORA-213ENST00000560300 ADAMTS12P58397 1594 aa30.81■■■□□ 2.52
RORA-213ENST00000560300 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
RORA-213ENST00000560300 TRHP20396 242 aaPredicted RBP30.74■■■□□ 2.51
RORA-213ENST00000560300 CEP170Q5SW79 1584 aa30.7■■■□□ 2.5
RORA-213ENST00000560300 NUP160Q12769 1436 aa30.69■■■□□ 2.5
RORA-213ENST00000560300 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
RORA-213ENST00000560300 FHAD1B1AJZ9 1412 aa30.67■■■□□ 2.5
RORA-213ENST00000560300 ERCC6L2Q5T890 1561 aa30.63■■■□□ 2.49
RORA-213ENST00000560300 SHROOM2Q13796 1616 aa30.56■■■□□ 2.48
RORA-213ENST00000560300 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
RORA-213ENST00000560300 PRG4Q92954 1404 aaPredicted RBP30.36■■■□□ 2.45
RORA-213ENST00000560300 JPH4Q96JJ6 628 aa30.32■■■□□ 2.44
RORA-213ENST00000560300 KIF27Q86VH2 1401 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms