RNA–Protein interactions for RNA: ENST00000560094.1

AC027228.1-201, humanhuman

TSL 3 BASIC

Gene AC027228.1, Length 325 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027228.1-201ENST00000560094 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
AC027228.1-201ENST00000560094 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
AC027228.1-201ENST00000560094 ABCC9O60706 1549 aa27.76■■■□□ 2.03
AC027228.1-201ENST00000560094 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
AC027228.1-201ENST00000560094 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
AC027228.1-201ENST00000560094 NACADO15069 1562 aa26.26■■□□□ 1.79
AC027228.1-201ENST00000560094 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
AC027228.1-201ENST00000560094 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
AC027228.1-201ENST00000560094 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
AC027228.1-201ENST00000560094 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
AC027228.1-201ENST00000560094 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
AC027228.1-201ENST00000560094 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
AC027228.1-201ENST00000560094 BICRAQ9NZM4 1560 aa25.73■■□□□ 1.71
AC027228.1-201ENST00000560094 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
AC027228.1-201ENST00000560094 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
AC027228.1-201ENST00000560094 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
AC027228.1-201ENST00000560094 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
AC027228.1-201ENST00000560094 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
AC027228.1-201ENST00000560094 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
AC027228.1-201ENST00000560094 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
AC027228.1-201ENST00000560094 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
AC027228.1-201ENST00000560094 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.46
AC027228.1-201ENST00000560094 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
AC027228.1-201ENST00000560094 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
AC027228.1-201ENST00000560094 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
AC027228.1-201ENST00000560094 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
AC027228.1-201ENST00000560094 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
AC027228.1-201ENST00000560094 NESP48681 1621 aa23.98■■□□□ 1.43
AC027228.1-201ENST00000560094 WIZO95785 1651 aa23.87■■□□□ 1.41
AC027228.1-201ENST00000560094 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
AC027228.1-201ENST00000560094 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
AC027228.1-201ENST00000560094 CUX2O14529 1486 aa23.65■■□□□ 1.38
AC027228.1-201ENST00000560094 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
AC027228.1-201ENST00000560094 LAMC3Q9Y6N6 1575 aa23.63■■□□□ 1.37
AC027228.1-201ENST00000560094 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
AC027228.1-201ENST00000560094 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
AC027228.1-201ENST00000560094 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
AC027228.1-201ENST00000560094 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
AC027228.1-201ENST00000560094 DNAJC5Q9H3Z4 198 aa23.48■■□□□ 1.35
AC027228.1-201ENST00000560094 CFTRP13569 1480 aa23.41■■□□□ 1.34
AC027228.1-201ENST00000560094 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
AC027228.1-201ENST00000560094 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
AC027228.1-201ENST00000560094 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
AC027228.1-201ENST00000560094 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
AC027228.1-201ENST00000560094 WDR62O43379 1518 aa23.26■■□□□ 1.31
AC027228.1-201ENST00000560094 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
AC027228.1-201ENST00000560094 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
AC027228.1-201ENST00000560094 PRDM2Q13029 1718 aa22.98■■□□□ 1.27
AC027228.1-201ENST00000560094 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
AC027228.1-201ENST00000560094 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
AC027228.1-201ENST00000560094 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
AC027228.1-201ENST00000560094 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
AC027228.1-201ENST00000560094 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
AC027228.1-201ENST00000560094 OSCARQ8IYS5 282 aa22.75■■□□□ 1.23
AC027228.1-201ENST00000560094 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
AC027228.1-201ENST00000560094 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
AC027228.1-201ENST00000560094 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
AC027228.1-201ENST00000560094 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
AC027228.1-201ENST00000560094 CUX1P39880 1505 aa22.69■■□□□ 1.22
AC027228.1-201ENST00000560094 SOGA1O94964 1423 aa22.65■■□□□ 1.22
AC027228.1-201ENST00000560094 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
AC027228.1-201ENST00000560094 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
AC027228.1-201ENST00000560094 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
AC027228.1-201ENST00000560094 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
AC027228.1-201ENST00000560094 FBLN2P98095 1184 aa22.52■■□□□ 1.2
AC027228.1-201ENST00000560094 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
AC027228.1-201ENST00000560094 CHD1O14646 1710 aa22.4■■□□□ 1.18
AC027228.1-201ENST00000560094 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
AC027228.1-201ENST00000560094 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
AC027228.1-201ENST00000560094 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
AC027228.1-201ENST00000560094 CHMP7Q8WUX9 453 aaPredicted RBP22.36■■□□□ 1.17
AC027228.1-201ENST00000560094 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
AC027228.1-201ENST00000560094 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
AC027228.1-201ENST00000560094 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
AC027228.1-201ENST00000560094 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
AC027228.1-201ENST00000560094 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
AC027228.1-201ENST00000560094 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
AC027228.1-201ENST00000560094 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
AC027228.1-201ENST00000560094 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
AC027228.1-201ENST00000560094 MAGI1Q96QZ7 1491 aaPredicted RBP22.29■■□□□ 1.16
AC027228.1-201ENST00000560094 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
AC027228.1-201ENST00000560094 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
AC027228.1-201ENST00000560094 ABCA5Q8WWZ7 1642 aa22.27■■□□□ 1.16
AC027228.1-201ENST00000560094 SYNJ2O15056 1496 aa22.25■■□□□ 1.15
AC027228.1-201ENST00000560094 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
AC027228.1-201ENST00000560094 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
AC027228.1-201ENST00000560094 ARAP1Q96P48 1450 aa22.17■■□□□ 1.14
AC027228.1-201ENST00000560094 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
AC027228.1-201ENST00000560094 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
AC027228.1-201ENST00000560094 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
AC027228.1-201ENST00000560094 ERICH3Q5RHP9 1530 aa22.03■■□□□ 1.12
AC027228.1-201ENST00000560094 NUP160Q12769 1436 aa22.02■■□□□ 1.12
AC027228.1-201ENST00000560094 CEP170Q5SW79 1584 aa22.02■■□□□ 1.12
AC027228.1-201ENST00000560094 IGF1RP08069 1367 aa21.99■■□□□ 1.11
AC027228.1-201ENST00000560094 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
AC027228.1-201ENST00000560094 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
AC027228.1-201ENST00000560094 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
AC027228.1-201ENST00000560094 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
AC027228.1-201ENST00000560094 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
AC027228.1-201ENST00000560094 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms