RNA–Protein interactions for RNA: ENST00000559954.1

AC090607.3-201, humanhuman

TSL 2 BASIC

Gene AC090607.3, Length 388 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090607.3-201ENST00000559954 AEBP2Q6ZN18 517 aaPredicted RBP26.84■■□□□ 1.89
AC090607.3-201ENST00000559954 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
AC090607.3-201ENST00000559954 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
AC090607.3-201ENST00000559954 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
AC090607.3-201ENST00000559954 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
AC090607.3-201ENST00000559954 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
AC090607.3-201ENST00000559954 FOXD1Q16676 465 aa21.06■□□□□ 0.96
AC090607.3-201ENST00000559954 ADRA2BP18089 450 aa20.58■□□□□ 0.89
AC090607.3-201ENST00000559954 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
AC090607.3-201ENST00000559954 KCNA4P22459 653 aa20.28■□□□□ 0.84
AC090607.3-201ENST00000559954 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
AC090607.3-201ENST00000559954 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
AC090607.3-201ENST00000559954 PIAS4Q8N2W9 510 aaPredicted RBP19.97■□□□□ 0.79
AC090607.3-201ENST00000559954 ABCC9O60706 1549 aa19.94■□□□□ 0.78
AC090607.3-201ENST00000559954 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
AC090607.3-201ENST00000559954 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
AC090607.3-201ENST00000559954 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
AC090607.3-201ENST00000559954 MSH5O43196 834 aa19.28■□□□□ 0.68
AC090607.3-201ENST00000559954 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
AC090607.3-201ENST00000559954 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
AC090607.3-201ENST00000559954 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
AC090607.3-201ENST00000559954 NACADO15069 1562 aa19.1■□□□□ 0.65
AC090607.3-201ENST00000559954 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
AC090607.3-201ENST00000559954 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
AC090607.3-201ENST00000559954 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
AC090607.3-201ENST00000559954 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
AC090607.3-201ENST00000559954 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
AC090607.3-201ENST00000559954 ZBTB22O15209 634 aa18.71■□□□□ 0.59
AC090607.3-201ENST00000559954 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
AC090607.3-201ENST00000559954 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
AC090607.3-201ENST00000559954 MAPK8IP2Q13387 824 aaPredicted RBP18.57■□□□□ 0.56
AC090607.3-201ENST00000559954 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
AC090607.3-201ENST00000559954 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
AC090607.3-201ENST00000559954 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
AC090607.3-201ENST00000559954 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
AC090607.3-201ENST00000559954 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
AC090607.3-201ENST00000559954 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
AC090607.3-201ENST00000559954 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
AC090607.3-201ENST00000559954 RNF216Q9NWF9 866 aaPredicted RBP18.13■□□□□ 0.49
AC090607.3-201ENST00000559954 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
AC090607.3-201ENST00000559954 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
AC090607.3-201ENST00000559954 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
AC090607.3-201ENST00000559954 RTN4Q9NQC3 1192 aaKnown RBP17.96■□□□□ 0.47
AC090607.3-201ENST00000559954 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
AC090607.3-201ENST00000559954 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
AC090607.3-201ENST00000559954 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
AC090607.3-201ENST00000559954 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
AC090607.3-201ENST00000559954 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
AC090607.3-201ENST00000559954 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
AC090607.3-201ENST00000559954 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
AC090607.3-201ENST00000559954 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
AC090607.3-201ENST00000559954 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
AC090607.3-201ENST00000559954 ATXN8OSP0DMR3 200 aa17.55■□□□□ 0.4
AC090607.3-201ENST00000559954 FKBP8Q14318 412 aa17.52■□□□□ 0.4
AC090607.3-201ENST00000559954 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
AC090607.3-201ENST00000559954 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
AC090607.3-201ENST00000559954 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
AC090607.3-201ENST00000559954 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
AC090607.3-201ENST00000559954 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
AC090607.3-201ENST00000559954 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
AC090607.3-201ENST00000559954 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
AC090607.3-201ENST00000559954 WIZO95785 1651 aa17.28■□□□□ 0.36
AC090607.3-201ENST00000559954 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
AC090607.3-201ENST00000559954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.34
AC090607.3-201ENST00000559954 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
AC090607.3-201ENST00000559954 NESP48681 1621 aa17.17■□□□□ 0.34
AC090607.3-201ENST00000559954 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
AC090607.3-201ENST00000559954 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
AC090607.3-201ENST00000559954 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
AC090607.3-201ENST00000559954 CUX2O14529 1486 aa17.08■□□□□ 0.32
AC090607.3-201ENST00000559954 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
AC090607.3-201ENST00000559954 CFTRP13569 1480 aa16.96■□□□□ 0.31
AC090607.3-201ENST00000559954 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
AC090607.3-201ENST00000559954 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
AC090607.3-201ENST00000559954 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
AC090607.3-201ENST00000559954 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
AC090607.3-201ENST00000559954 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
AC090607.3-201ENST00000559954 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
AC090607.3-201ENST00000559954 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
AC090607.3-201ENST00000559954 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
AC090607.3-201ENST00000559954 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
AC090607.3-201ENST00000559954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
AC090607.3-201ENST00000559954 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
AC090607.3-201ENST00000559954 WDR62O43379 1518 aa16.8■□□□□ 0.28
AC090607.3-201ENST00000559954 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.28
AC090607.3-201ENST00000559954 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
AC090607.3-201ENST00000559954 ABCC8Q09428 1581 aa16.69■□□□□ 0.26
AC090607.3-201ENST00000559954 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
AC090607.3-201ENST00000559954 DNAJC5Q9H3Z4 198 aa16.66■□□□□ 0.26
AC090607.3-201ENST00000559954 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
AC090607.3-201ENST00000559954 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
AC090607.3-201ENST00000559954 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
AC090607.3-201ENST00000559954 APLP2Q06481 763 aa16.56■□□□□ 0.24
AC090607.3-201ENST00000559954 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
AC090607.3-201ENST00000559954 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
AC090607.3-201ENST00000559954 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
AC090607.3-201ENST00000559954 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
AC090607.3-201ENST00000559954 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
AC090607.3-201ENST00000559954 SOGA1O94964 1423 aa16.45■□□□□ 0.22
AC090607.3-201ENST00000559954 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms