RNA–Protein interactions for RNA: ENST00000559882.1

RNF31-219, Transcript of ring finger protein 31, humanhuman

TSL 4

Gene RNF31, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-219ENST00000559882 NISCHQ9Y2I1 1504 aa55.55■■■■■ 6.48
RNF31-219ENST00000559882 CCDC180Q9P1Z9 1646 aa49.49■■■■■ 5.51
RNF31-219ENST00000559882 ABCC9O60706 1549 aa48.84■■■■■ 5.41
RNF31-219ENST00000559882 RB1CC1Q8TDY2 1594 aa46.79■■■■■ 5.08
RNF31-219ENST00000559882 NACADO15069 1562 aa46.65■■■■■ 5.06
RNF31-219ENST00000559882 DCAF8L2P0C7V8 631 aa46.61■■■■■ 5.05
RNF31-219ENST00000559882 MYO15BQ96JP2 1530 aa46.24■■■■■ 4.99
RNF31-219ENST00000559882 ZCCHC6Q5VYS8 1495 aaKnown RBP46.21■■■■■ 4.99
RNF31-219ENST00000559882 DCAF1Q9Y4B6 1507 aa45.92■■■■■ 4.94
RNF31-219ENST00000559882 PABPN1Q86U42 306 aaKnown RBP eCLIP45.6■■■■■ 4.89
RNF31-219ENST00000559882 UNC13AQ9UPW8 1703 aa45.6■■■■■ 4.89
RNF31-219ENST00000559882 BICRAQ9NZM4 1560 aa45.36■■■■■ 4.85
RNF31-219ENST00000559882 SCRIBQ14160 1630 aa45.19■■■■■ 4.82
RNF31-219ENST00000559882 DNAJC5BQ9UF47 199 aa45.11■■■■■ 4.81
RNF31-219ENST00000559882 SHROOM4Q9ULL8 1493 aa44.9■■■■■ 4.78
RNF31-219ENST00000559882 EIF4G1Q04637 1599 aaKnown RBP44.22■■■■■ 4.67
RNF31-219ENST00000559882 CC2D2AQ9P2K1 1620 aa44.12■■■■■ 4.65
RNF31-219ENST00000559882 CECR2Q9BXF3 1484 aa43.93■■■■■ 4.62
RNF31-219ENST00000559882 SMARCA4P51532 1647 aa43.16■■■■■ 4.5
RNF31-219ENST00000559882 BAZ1AQ9NRL2 1556 aaPredicted RBP43.08■■■■■ 4.49
RNF31-219ENST00000559882 NCAPD3P42695 1498 aa43.06■■■■■ 4.48
RNF31-219ENST00000559882 ATAD2BQ9ULI0 1458 aa43.05■■■■■ 4.48
RNF31-219ENST00000559882 SMARCA2P51531 1590 aa42.97■■■■■ 4.47
RNF31-219ENST00000559882 HMGXB3Q12766 1538 aa42.81■■■■■ 4.44
RNF31-219ENST00000559882 MROH2BQ7Z745 1585 aa42.81■■■■■ 4.44
RNF31-219ENST00000559882 PEG3Q9GZU2 1588 aa42.73■■■■■ 4.43
RNF31-219ENST00000559882 BAZ1BQ9UIG0 1483 aaKnown RBP42.69■■■■■ 4.42
RNF31-219ENST00000559882 WIZO95785 1651 aa42.28■■■■■ 4.36
RNF31-219ENST00000559882 RSF1Q96T23 1441 aaPredicted RBP42.2■■■■■ 4.35
RNF31-219ENST00000559882 ERCC6Q03468 1493 aa42.16■■■■■ 4.34
RNF31-219ENST00000559882 NESP48681 1621 aa42.14■■■■■ 4.34
RNF31-219ENST00000559882 LAMC3Q9Y6N6 1575 aa41.96■■■■■ 4.31
RNF31-219ENST00000559882 TOP2AP11388 1531 aaKnown RBP41.87■■■■■ 4.29
RNF31-219ENST00000559882 CADPSQ9ULU8 1353 aa41.81■■■■■ 4.28
RNF31-219ENST00000559882 CUX2O14529 1486 aa41.79■■■■■ 4.28
RNF31-219ENST00000559882 PDS5BQ9NTI5 1447 aa41.74■■■■■ 4.27
RNF31-219ENST00000559882 KIF21AQ7Z4S6 1674 aa41.57■■■■■ 4.25
RNF31-219ENST00000559882 THOC2Q8NI27 1593 aaKnown RBP41.55■■■■■ 4.24
RNF31-219ENST00000559882 CFTRP13569 1480 aa41.47■■■■■ 4.23
RNF31-219ENST00000559882 CCDC88BA6NC98 1476 aa41.37■■■■■ 4.21
RNF31-219ENST00000559882 FANCD2Q9BXW9 1451 aa41.34■■■■■ 4.21
RNF31-219ENST00000559882 MRC2Q9UBG0 1479 aa41.34■■■■■ 4.21
RNF31-219ENST00000559882 CEP164Q9UPV0 1460 aa41.33■■■■■ 4.21
RNF31-219ENST00000559882 WDR62O43379 1518 aa41.19■■■■■ 4.18
RNF31-219ENST00000559882 PRDM2Q13029 1718 aa41.01■■■■■ 4.16
RNF31-219ENST00000559882 URB2Q14146 1524 aaKnown RBP40.93■■■■■ 4.14
RNF31-219ENST00000559882 SUPT5HO00267 1087 aaKnown RBP40.92■■■■■ 4.14
RNF31-219ENST00000559882 DNAJC5Q9H3Z4 198 aa40.91■■■■■ 4.14
RNF31-219ENST00000559882 TOPBP1Q92547 1522 aa40.62■■■■■ 4.09
RNF31-219ENST00000559882 ABCC8Q09428 1581 aa40.59■■■■■ 4.09
RNF31-219ENST00000559882 DNMBPQ6XZF7 1577 aa40.53■■■■■ 4.08
RNF31-219ENST00000559882 IFT140Q96RY7 1462 aa40.47■■■■■ 4.07
RNF31-219ENST00000559882 ZNF608Q9ULD9 1512 aaPredicted RBP40.31■■■■■ 4.04
RNF31-219ENST00000559882 POLA1P09884 1462 aaPredicted RBP40.26■■■■■ 4.04
RNF31-219ENST00000559882 CUX1P39880 1505 aa40.18■■■■■ 4.02
RNF31-219ENST00000559882 TARBP1Q13395 1621 aaKnown RBP40.16■■■■■ 4.02
RNF31-219ENST00000559882 FGD5Q6ZNL6 1462 aa40.12■■■■■ 4.01
RNF31-219ENST00000559882 EIF4G3O43432 1585 aaKnown RBP40.11■■■■■ 4.01
RNF31-219ENST00000559882 RAD54L2Q9Y4B4 1467 aa40.1■■■■■ 4.01
RNF31-219ENST00000559882 SOGA1O94964 1423 aa40.09■■■■■ 4.01
RNF31-219ENST00000559882 AQRO60306 1485 aaKnown RBP eCLIP40.04■■■■■ 49e-11■■■■■ 32.3
RNF31-219ENST00000559882 OSCARQ8IYS5 282 aa40.01■■■■■ 4
RNF31-219ENST00000559882 TDRD9Q8NDG6 1382 aaKnown RBP39.93■■■■□ 3.98
RNF31-219ENST00000559882 WDR97A6NE52 1622 aa39.83■■■■□ 3.97
RNF31-219ENST00000559882 WRNQ14191 1432 aaPredicted RBP eCLIP39.82■■■■□ 3.97
RNF31-219ENST00000559882 TOP2BQ02880 1626 aa39.72■■■■□ 3.95
RNF31-219ENST00000559882 SYNJ1O43426 1573 aa39.71■■■■□ 3.95
RNF31-219ENST00000559882 ABCA10Q8WWZ4 1543 aa39.7■■■■□ 3.95
RNF31-219ENST00000559882 BIVM-ERCC5R4GMW8 1640 aa39.69■■■■□ 3.94
RNF31-219ENST00000559882 SNAPC4Q5SXM2 1469 aa39.68■■■■□ 3.94
RNF31-219ENST00000559882 GRIN2BQ13224 1484 aa39.68■■■■□ 3.94
RNF31-219ENST00000559882 FBLN2P98095 1184 aa39.67■■■■□ 3.94
RNF31-219ENST00000559882 GAPVD1Q14C86 1478 aa39.62■■■■□ 3.93
RNF31-219ENST00000559882 CHD1O14646 1710 aa39.62■■■■□ 3.93
RNF31-219ENST00000559882 MAGI1Q96QZ7 1491 aaPredicted RBP39.6■■■■□ 3.93
RNF31-219ENST00000559882 ABCA5Q8WWZ7 1642 aa39.54■■■■□ 3.92
RNF31-219ENST00000559882 CHMP7Q8WUX9 453 aaPredicted RBP39.49■■■■□ 3.91
RNF31-219ENST00000559882 PBRM1Q86U86 1689 aa39.48■■■■□ 3.91
RNF31-219ENST00000559882 TRIM41Q8WV44 630 aa39.48■■■■□ 3.91
RNF31-219ENST00000559882 SYNJ2O15056 1496 aa39.45■■■■□ 3.91
RNF31-219ENST00000559882 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
RNF31-219ENST00000559882 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
RNF31-219ENST00000559882 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
RNF31-219ENST00000559882 ARHGEF11O15085 1522 aa39.35■■■■□ 3.89
RNF31-219ENST00000559882 CLASP1Q7Z460 1538 aa39.24■■■■□ 3.87
RNF31-219ENST00000559882 ADAMTS12P58397 1594 aa39.22■■■■□ 3.87
RNF31-219ENST00000559882 ERICH3Q5RHP9 1530 aa39.21■■■■□ 3.87
RNF31-219ENST00000559882 FHAD1B1AJZ9 1412 aa39.16■■■■□ 3.86
RNF31-219ENST00000559882 GRIN2AQ12879 1464 aa39.16■■■■□ 3.86
RNF31-219ENST00000559882 CYB5RLQ6IPT4 315 aa39.04■■■■□ 3.84
RNF31-219ENST00000559882 KIF27Q86VH2 1401 aa39.03■■■■□ 3.84
RNF31-219ENST00000559882 ARAP1Q96P48 1450 aa39.03■■■■□ 3.84
RNF31-219ENST00000559882 NUP160Q12769 1436 aa39■■■■□ 3.83
RNF31-219ENST00000559882 CEP170Q5SW79 1584 aa38.95■■■■□ 3.83
RNF31-219ENST00000559882 IGF1RP08069 1367 aa38.88■■■■□ 3.81
RNF31-219ENST00000559882 CUL7Q14999 1698 aa38.77■■■■□ 3.8
RNF31-219ENST00000559882 SHROOM2Q13796 1616 aa38.69■■■■□ 3.78
RNF31-219ENST00000559882 ERCC6L2Q5T890 1561 aa38.67■■■■□ 3.78
RNF31-219ENST00000559882 CARMIL1Q5VZK9 1371 aa38.66■■■■□ 3.78
RNF31-219ENST00000559882 RUSC2Q8N2Y8 1516 aa38.65■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms