RNA–Protein interactions for RNA: ENST00000559870.2

AC027088.2-201, humanhuman

TSL 3 BASIC

Gene AC027088.2, Length 916 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.2-201ENST00000559870 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
AC027088.2-201ENST00000559870 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
AC027088.2-201ENST00000559870 ABCC9O60706 1549 aa21.55■■□□□ 1.04
AC027088.2-201ENST00000559870 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
AC027088.2-201ENST00000559870 NACADO15069 1562 aa20.63■□□□□ 0.89
AC027088.2-201ENST00000559870 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
AC027088.2-201ENST00000559870 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
AC027088.2-201ENST00000559870 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
AC027088.2-201ENST00000559870 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
AC027088.2-201ENST00000559870 UNC13AQ9UPW8 1703 aa20.17■□□□□ 0.82
AC027088.2-201ENST00000559870 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
AC027088.2-201ENST00000559870 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
AC027088.2-201ENST00000559870 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
AC027088.2-201ENST00000559870 SHROOM4Q9ULL8 1493 aa19.87■□□□□ 0.77
AC027088.2-201ENST00000559870 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
AC027088.2-201ENST00000559870 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
AC027088.2-201ENST00000559870 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
AC027088.2-201ENST00000559870 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
AC027088.2-201ENST00000559870 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
AC027088.2-201ENST00000559870 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
AC027088.2-201ENST00000559870 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
AC027088.2-201ENST00000559870 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
AC027088.2-201ENST00000559870 SMARCA2P51531 1590 aa19■□□□□ 0.63
AC027088.2-201ENST00000559870 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
AC027088.2-201ENST00000559870 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
AC027088.2-201ENST00000559870 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
AC027088.2-201ENST00000559870 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
AC027088.2-201ENST00000559870 WIZO95785 1651 aa18.69■□□□□ 0.58
AC027088.2-201ENST00000559870 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
AC027088.2-201ENST00000559870 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
AC027088.2-201ENST00000559870 NESP48681 1621 aa18.59■□□□□ 0.57
AC027088.2-201ENST00000559870 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
AC027088.2-201ENST00000559870 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
AC027088.2-201ENST00000559870 CUX2O14529 1486 aa18.46■□□□□ 0.55
AC027088.2-201ENST00000559870 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
AC027088.2-201ENST00000559870 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
AC027088.2-201ENST00000559870 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
AC027088.2-201ENST00000559870 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
AC027088.2-201ENST00000559870 CFTRP13569 1480 aa18.32■□□□□ 0.52
AC027088.2-201ENST00000559870 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
AC027088.2-201ENST00000559870 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
AC027088.2-201ENST00000559870 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
AC027088.2-201ENST00000559870 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
AC027088.2-201ENST00000559870 WDR62O43379 1518 aa18.2■□□□□ 0.5
AC027088.2-201ENST00000559870 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
AC027088.2-201ENST00000559870 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
AC027088.2-201ENST00000559870 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
AC027088.2-201ENST00000559870 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
AC027088.2-201ENST00000559870 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
AC027088.2-201ENST00000559870 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
AC027088.2-201ENST00000559870 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
AC027088.2-201ENST00000559870 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
AC027088.2-201ENST00000559870 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
AC027088.2-201ENST00000559870 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
AC027088.2-201ENST00000559870 CUX1P39880 1505 aa17.75■□□□□ 0.43
AC027088.2-201ENST00000559870 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
AC027088.2-201ENST00000559870 EIF4G3O43432 1585 aaKnown RBP17.73■□□□□ 0.43
AC027088.2-201ENST00000559870 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
AC027088.2-201ENST00000559870 SOGA1O94964 1423 aa17.7■□□□□ 0.42
AC027088.2-201ENST00000559870 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
AC027088.2-201ENST00000559870 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
AC027088.2-201ENST00000559870 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
AC027088.2-201ENST00000559870 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
AC027088.2-201ENST00000559870 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
AC027088.2-201ENST00000559870 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
AC027088.2-201ENST00000559870 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
AC027088.2-201ENST00000559870 BIVM-ERCC5R4GMW8 1640 aa17.57■□□□□ 0.4
AC027088.2-201ENST00000559870 SYNJ1O43426 1573 aa17.55■□□□□ 0.4
AC027088.2-201ENST00000559870 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
AC027088.2-201ENST00000559870 GRIN2BQ13224 1484 aa17.52■□□□□ 0.4
AC027088.2-201ENST00000559870 SNAPC4Q5SXM2 1469 aa17.52■□□□□ 0.4
AC027088.2-201ENST00000559870 CHD1O14646 1710 aa17.52■□□□□ 0.39
AC027088.2-201ENST00000559870 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
AC027088.2-201ENST00000559870 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
AC027088.2-201ENST00000559870 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
AC027088.2-201ENST00000559870 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
AC027088.2-201ENST00000559870 FBLN2P98095 1184 aa17.47■□□□□ 0.39
AC027088.2-201ENST00000559870 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
AC027088.2-201ENST00000559870 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
AC027088.2-201ENST00000559870 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
AC027088.2-201ENST00000559870 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
AC027088.2-201ENST00000559870 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
AC027088.2-201ENST00000559870 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
AC027088.2-201ENST00000559870 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
AC027088.2-201ENST00000559870 ADAMTS12P58397 1594 aa17.35■□□□□ 0.37
AC027088.2-201ENST00000559870 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
AC027088.2-201ENST00000559870 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
AC027088.2-201ENST00000559870 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
AC027088.2-201ENST00000559870 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
AC027088.2-201ENST00000559870 KIF27Q86VH2 1401 aa17.24■□□□□ 0.35
AC027088.2-201ENST00000559870 NUP160Q12769 1436 aa17.22■□□□□ 0.35
AC027088.2-201ENST00000559870 ARAP1Q96P48 1450 aa17.22■□□□□ 0.35
AC027088.2-201ENST00000559870 CEP170Q5SW79 1584 aa17.21■□□□□ 0.35
AC027088.2-201ENST00000559870 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
AC027088.2-201ENST00000559870 CUL7Q14999 1698 aa17.16■□□□□ 0.34
AC027088.2-201ENST00000559870 IGF1RP08069 1367 aa17.15■□□□□ 0.34
AC027088.2-201ENST00000559870 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
AC027088.2-201ENST00000559870 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
AC027088.2-201ENST00000559870 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
AC027088.2-201ENST00000559870 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms