RNA–Protein interactions for RNA: ENST00000559779.1

CERNA1-201, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 3 BASIC

Gene CERNA1, Length 908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-201ENST00000559779 NISCHQ9Y2I1 1504 aa40.07■■■■■ 4.01
CERNA1-201ENST00000559779 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
CERNA1-201ENST00000559779 ABCC9O60706 1549 aa35.54■■■■□ 3.28
CERNA1-201ENST00000559779 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.03
CERNA1-201ENST00000559779 DCAF8L2P0C7V8 631 aa33.84■■■■□ 3.01
CERNA1-201ENST00000559779 NACADO15069 1562 aa33.77■■■■□ 3
CERNA1-201ENST00000559779 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
CERNA1-201ENST00000559779 ZCCHC6Q5VYS8 1495 aaKnown RBP33.27■■■□□ 2.92
CERNA1-201ENST00000559779 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
CERNA1-201ENST00000559779 UNC13AQ9UPW8 1703 aa33.16■■■□□ 2.9
CERNA1-201ENST00000559779 DCAF1Q9Y4B6 1507 aa33.08■■■□□ 2.89
CERNA1-201ENST00000559779 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
CERNA1-201ENST00000559779 BICRAQ9NZM4 1560 aa32.9■■■□□ 2.86
CERNA1-201ENST00000559779 SCRIBQ14160 1630 aa32.7■■■□□ 2.83
CERNA1-201ENST00000559779 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
CERNA1-201ENST00000559779 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
CERNA1-201ENST00000559779 CC2D2AQ9P2K1 1620 aa32.09■■■□□ 2.73
CERNA1-201ENST00000559779 CECR2Q9BXF3 1484 aa31.97■■■□□ 2.71
CERNA1-201ENST00000559779 SMARCA4P51532 1647 aa31.2■■■□□ 2.58
CERNA1-201ENST00000559779 NCAPD3P42695 1498 aa31.17■■■□□ 2.58
CERNA1-201ENST00000559779 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.57
CERNA1-201ENST00000559779 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
CERNA1-201ENST00000559779 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
CERNA1-201ENST00000559779 HMGXB3Q12766 1538 aa30.96■■■□□ 2.55
CERNA1-201ENST00000559779 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.54
CERNA1-201ENST00000559779 MROH2BQ7Z745 1585 aa30.89■■■□□ 2.54
CERNA1-201ENST00000559779 PEG3Q9GZU2 1588 aa30.84■■■□□ 2.53
CERNA1-201ENST00000559779 ERCC6Q03468 1493 aa30.69■■■□□ 2.5
CERNA1-201ENST00000559779 NESP48681 1621 aa30.61■■■□□ 2.49
CERNA1-201ENST00000559779 WIZO95785 1651 aa30.55■■■□□ 2.48
CERNA1-201ENST00000559779 CUX2O14529 1486 aa30.44■■■□□ 2.46
CERNA1-201ENST00000559779 LAMC3Q9Y6N6 1575 aa30.42■■■□□ 2.46
CERNA1-201ENST00000559779 RSF1Q96T23 1441 aaPredicted RBP30.38■■■□□ 2.45
CERNA1-201ENST00000559779 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
CERNA1-201ENST00000559779 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
CERNA1-201ENST00000559779 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
CERNA1-201ENST00000559779 THOC2Q8NI27 1593 aaKnown RBP30.19■■■□□ 2.42
CERNA1-201ENST00000559779 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
CERNA1-201ENST00000559779 DNAJC5Q9H3Z4 198 aa30.06■■■□□ 2.4
CERNA1-201ENST00000559779 MRC2Q9UBG0 1479 aa29.98■■■□□ 2.39
CERNA1-201ENST00000559779 CFTRP13569 1480 aa29.97■■■□□ 2.39
CERNA1-201ENST00000559779 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
CERNA1-201ENST00000559779 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
CERNA1-201ENST00000559779 WDR62O43379 1518 aa29.87■■■□□ 2.37
CERNA1-201ENST00000559779 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
CERNA1-201ENST00000559779 PRDM2Q13029 1718 aa29.7■■■□□ 2.34
CERNA1-201ENST00000559779 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
CERNA1-201ENST00000559779 SUPT5HO00267 1087 aaKnown RBP29.4■■■□□ 2.3
CERNA1-201ENST00000559779 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
CERNA1-201ENST00000559779 ABCC8Q09428 1581 aa29.36■■■□□ 2.29
CERNA1-201ENST00000559779 DNMBPQ6XZF7 1577 aa29.31■■■□□ 2.28
CERNA1-201ENST00000559779 IFT140Q96RY7 1462 aa29.31■■■□□ 2.28
CERNA1-201ENST00000559779 ZNF608Q9ULD9 1512 aaPredicted RBP29.24■■■□□ 2.27
CERNA1-201ENST00000559779 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
CERNA1-201ENST00000559779 POLA1P09884 1462 aaPredicted RBP29.11■■■□□ 2.25
CERNA1-201ENST00000559779 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
CERNA1-201ENST00000559779 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
CERNA1-201ENST00000559779 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.24
CERNA1-201ENST00000559779 RAD54L2Q9Y4B4 1467 aa29.03■■■□□ 2.24
CERNA1-201ENST00000559779 SOGA1O94964 1423 aa29.02■■■□□ 2.24
CERNA1-201ENST00000559779 CUX1P39880 1505 aa29■■■□□ 2.23
CERNA1-201ENST00000559779 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
CERNA1-201ENST00000559779 TRIM41Q8WV44 630 aa28.98■■■□□ 2.23
CERNA1-201ENST00000559779 TDRD9Q8NDG6 1382 aaKnown RBP28.92■■■□□ 2.22
CERNA1-201ENST00000559779 FBLN2P98095 1184 aa28.86■■■□□ 2.21
CERNA1-201ENST00000559779 CHD1O14646 1710 aa28.82■■■□□ 2.2
CERNA1-201ENST00000559779 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
CERNA1-201ENST00000559779 SNAPC4Q5SXM2 1469 aa28.74■■■□□ 2.19
CERNA1-201ENST00000559779 RIMBP3CA6NJZ7 1639 aa28.71■■■□□ 2.19
CERNA1-201ENST00000559779 RIMBP3BA6NNM3 1639 aa28.71■■■□□ 2.19
CERNA1-201ENST00000559779 RIMBP3Q9UFD9 1639 aa28.71■■■□□ 2.19
CERNA1-201ENST00000559779 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
CERNA1-201ENST00000559779 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.18
CERNA1-201ENST00000559779 ARHGEF11O15085 1522 aa28.66■■■□□ 2.18
CERNA1-201ENST00000559779 ABCA10Q8WWZ4 1543 aa28.66■■■□□ 2.18
CERNA1-201ENST00000559779 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
CERNA1-201ENST00000559779 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
CERNA1-201ENST00000559779 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
CERNA1-201ENST00000559779 TOP2BQ02880 1626 aa28.63■■■□□ 2.17
CERNA1-201ENST00000559779 BIVM-ERCC5R4GMW8 1640 aa28.62■■■□□ 2.17
CERNA1-201ENST00000559779 PBRM1Q86U86 1689 aa28.62■■■□□ 2.17
CERNA1-201ENST00000559779 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
CERNA1-201ENST00000559779 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
CERNA1-201ENST00000559779 SYNJ2O15056 1496 aa28.57■■■□□ 2.16
CERNA1-201ENST00000559779 CYB5RLQ6IPT4 315 aa28.49■■■□□ 2.15
CERNA1-201ENST00000559779 CLASP1Q7Z460 1538 aa28.46■■■□□ 2.15
CERNA1-201ENST00000559779 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
CERNA1-201ENST00000559779 ADAMTS12P58397 1594 aa28.35■■■□□ 2.13
CERNA1-201ENST00000559779 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
CERNA1-201ENST00000559779 ERICH3Q5RHP9 1530 aa28.31■■■□□ 2.12
CERNA1-201ENST00000559779 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
CERNA1-201ENST00000559779 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
CERNA1-201ENST00000559779 NUP160Q12769 1436 aa28.19■■■□□ 2.1
CERNA1-201ENST00000559779 KIF27Q86VH2 1401 aa28.12■■■□□ 2.09
CERNA1-201ENST00000559779 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
CERNA1-201ENST00000559779 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
CERNA1-201ENST00000559779 IGF1RP08069 1367 aa28.04■■■□□ 2.08
CERNA1-201ENST00000559779 SHROOM2Q13796 1616 aa28.03■■■□□ 2.08
CERNA1-201ENST00000559779 CUL7Q14999 1698 aa27.98■■■□□ 2.07
CERNA1-201ENST00000559779 JPH4Q96JJ6 628 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms