RNA–Protein interactions for RNA: ENST00000559706.1

GTF2A2-210, Transcript of general transcription factor IIA subunit 2, humanhuman

TSL 2

Gene GTF2A2, Length 382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-210ENST00000559706 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
GTF2A2-210ENST00000559706 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
GTF2A2-210ENST00000559706 ABCC9O60706 1549 aa30.17■■■□□ 2.42
GTF2A2-210ENST00000559706 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
GTF2A2-210ENST00000559706 NACADO15069 1562 aa28.94■■■□□ 2.22
GTF2A2-210ENST00000559706 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
GTF2A2-210ENST00000559706 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
GTF2A2-210ENST00000559706 MYO15BQ96JP2 1530 aa28.76■■■□□ 2.19
GTF2A2-210ENST00000559706 DCAF1Q9Y4B6 1507 aa28.63■■■□□ 2.17
GTF2A2-210ENST00000559706 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
GTF2A2-210ENST00000559706 BICRAQ9NZM4 1560 aa28.18■■■□□ 2.1
GTF2A2-210ENST00000559706 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
GTF2A2-210ENST00000559706 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
GTF2A2-210ENST00000559706 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
GTF2A2-210ENST00000559706 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
GTF2A2-210ENST00000559706 EIF4G1Q04637 1599 aaKnown RBP27.41■■□□□ 1.98
GTF2A2-210ENST00000559706 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
GTF2A2-210ENST00000559706 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
GTF2A2-210ENST00000559706 SMARCA4P51532 1647 aa26.88■■□□□ 1.89
GTF2A2-210ENST00000559706 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
GTF2A2-210ENST00000559706 ATAD2BQ9ULI0 1458 aa26.73■■□□□ 1.87
GTF2A2-210ENST00000559706 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
GTF2A2-210ENST00000559706 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
GTF2A2-210ENST00000559706 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
GTF2A2-210ENST00000559706 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
GTF2A2-210ENST00000559706 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
GTF2A2-210ENST00000559706 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
GTF2A2-210ENST00000559706 WIZO95785 1651 aa26.38■■□□□ 1.81
GTF2A2-210ENST00000559706 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
GTF2A2-210ENST00000559706 NESP48681 1621 aa26.12■■□□□ 1.77
GTF2A2-210ENST00000559706 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
GTF2A2-210ENST00000559706 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
GTF2A2-210ENST00000559706 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
GTF2A2-210ENST00000559706 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
GTF2A2-210ENST00000559706 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
GTF2A2-210ENST00000559706 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
GTF2A2-210ENST00000559706 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
GTF2A2-210ENST00000559706 CFTRP13569 1480 aa25.77■■□□□ 1.72
GTF2A2-210ENST00000559706 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
GTF2A2-210ENST00000559706 CUX2O14529 1486 aa25.74■■□□□ 1.71
GTF2A2-210ENST00000559706 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
GTF2A2-210ENST00000559706 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
GTF2A2-210ENST00000559706 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
GTF2A2-210ENST00000559706 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
GTF2A2-210ENST00000559706 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
GTF2A2-210ENST00000559706 WDR62O43379 1518 aa25.53■■□□□ 1.68
GTF2A2-210ENST00000559706 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
GTF2A2-210ENST00000559706 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
GTF2A2-210ENST00000559706 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
GTF2A2-210ENST00000559706 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
GTF2A2-210ENST00000559706 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
GTF2A2-210ENST00000559706 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
GTF2A2-210ENST00000559706 CUX1P39880 1505 aa25.04■■□□□ 1.6
GTF2A2-210ENST00000559706 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
GTF2A2-210ENST00000559706 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
GTF2A2-210ENST00000559706 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
GTF2A2-210ENST00000559706 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
GTF2A2-210ENST00000559706 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
GTF2A2-210ENST00000559706 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
GTF2A2-210ENST00000559706 SOGA1O94964 1423 aa24.86■■□□□ 1.57
GTF2A2-210ENST00000559706 SYNJ1O43426 1573 aa24.81■■□□□ 1.56
GTF2A2-210ENST00000559706 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
GTF2A2-210ENST00000559706 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
GTF2A2-210ENST00000559706 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.562e-8■□□□□ 8.7
GTF2A2-210ENST00000559706 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
GTF2A2-210ENST00000559706 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
GTF2A2-210ENST00000559706 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
GTF2A2-210ENST00000559706 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
GTF2A2-210ENST00000559706 ABCA10Q8WWZ4 1543 aa24.7■■□□□ 1.54
GTF2A2-210ENST00000559706 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
GTF2A2-210ENST00000559706 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
GTF2A2-210ENST00000559706 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
GTF2A2-210ENST00000559706 CHD1O14646 1710 aa24.6■■□□□ 1.53
GTF2A2-210ENST00000559706 GAPVD1Q14C86 1478 aa24.59■■□□□ 1.53
GTF2A2-210ENST00000559706 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
GTF2A2-210ENST00000559706 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
GTF2A2-210ENST00000559706 FBLN2P98095 1184 aa24.52■■□□□ 1.52
GTF2A2-210ENST00000559706 SYNJ2O15056 1496 aa24.45■■□□□ 1.51
GTF2A2-210ENST00000559706 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
GTF2A2-210ENST00000559706 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
GTF2A2-210ENST00000559706 ERICH3Q5RHP9 1530 aa24.39■■□□□ 1.49
GTF2A2-210ENST00000559706 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
GTF2A2-210ENST00000559706 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
GTF2A2-210ENST00000559706 RIMBP3CA6NJZ7 1639 aa24.31■■□□□ 1.48
GTF2A2-210ENST00000559706 RIMBP3BA6NNM3 1639 aa24.31■■□□□ 1.48
GTF2A2-210ENST00000559706 RIMBP3Q9UFD9 1639 aa24.31■■□□□ 1.48
GTF2A2-210ENST00000559706 ARHGEF11O15085 1522 aa24.3■■□□□ 1.48
GTF2A2-210ENST00000559706 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
GTF2A2-210ENST00000559706 GRIN2AQ12879 1464 aa24.3■■□□□ 1.48
GTF2A2-210ENST00000559706 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
GTF2A2-210ENST00000559706 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
GTF2A2-210ENST00000559706 NUP160Q12769 1436 aa24.21■■□□□ 1.47
GTF2A2-210ENST00000559706 IGF1RP08069 1367 aa24.19■■□□□ 1.46
GTF2A2-210ENST00000559706 CUL7Q14999 1698 aa24.17■■□□□ 1.46
GTF2A2-210ENST00000559706 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
GTF2A2-210ENST00000559706 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
GTF2A2-210ENST00000559706 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
GTF2A2-210ENST00000559706 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
GTF2A2-210ENST00000559706 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
GTF2A2-210ENST00000559706 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms