RNA–Protein interactions for RNA: ENST00000559533.5

RNF31-216, Transcript of ring finger protein 31, humanhuman

TSL 4

Gene RNF31, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-216ENST00000559533 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
RNF31-216ENST00000559533 ABCC9O60706 1549 aa33.6■■■□□ 2.97
RNF31-216ENST00000559533 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
RNF31-216ENST00000559533 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
RNF31-216ENST00000559533 DNAJC5BQ9UF47 199 aa31.8■■■□□ 2.68
RNF31-216ENST00000559533 NACADO15069 1562 aa31.55■■■□□ 2.64
RNF31-216ENST00000559533 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
RNF31-216ENST00000559533 PABPN1Q86U42 306 aaKnown RBP eCLIP31.19■■■□□ 2.58
RNF31-216ENST00000559533 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
RNF31-216ENST00000559533 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.55
RNF31-216ENST00000559533 BICRAQ9NZM4 1560 aa30.92■■■□□ 2.54
RNF31-216ENST00000559533 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
RNF31-216ENST00000559533 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.48
RNF31-216ENST00000559533 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
RNF31-216ENST00000559533 CC2D2AQ9P2K1 1620 aa30.34■■■□□ 2.45
RNF31-216ENST00000559533 CECR2Q9BXF3 1484 aa30.32■■■□□ 2.44
RNF31-216ENST00000559533 SCRIBQ14160 1630 aa30.28■■■□□ 2.44
RNF31-216ENST00000559533 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.43
RNF31-216ENST00000559533 DNAJC5Q9H3Z4 198 aa29.49■■■□□ 2.31
RNF31-216ENST00000559533 CUX2O14529 1486 aa29.15■■■□□ 2.26
RNF31-216ENST00000559533 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
RNF31-216ENST00000559533 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
RNF31-216ENST00000559533 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
RNF31-216ENST00000559533 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
RNF31-216ENST00000559533 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
RNF31-216ENST00000559533 SMARCA4P51532 1647 aa28.86■■■□□ 2.21
RNF31-216ENST00000559533 NESP48681 1621 aa28.75■■■□□ 2.19
RNF31-216ENST00000559533 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
RNF31-216ENST00000559533 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
RNF31-216ENST00000559533 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
RNF31-216ENST00000559533 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
RNF31-216ENST00000559533 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
RNF31-216ENST00000559533 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
RNF31-216ENST00000559533 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
RNF31-216ENST00000559533 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
RNF31-216ENST00000559533 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
RNF31-216ENST00000559533 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
RNF31-216ENST00000559533 WDR62O43379 1518 aa28.11■■■□□ 2.09
RNF31-216ENST00000559533 WIZO95785 1651 aa28.03■■■□□ 2.08
RNF31-216ENST00000559533 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
RNF31-216ENST00000559533 CEP164Q9UPV0 1460 aa27.97■■■□□ 2.07
RNF31-216ENST00000559533 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
RNF31-216ENST00000559533 CFTRP13569 1480 aa27.82■■■□□ 2.04
RNF31-216ENST00000559533 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
RNF31-216ENST00000559533 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
RNF31-216ENST00000559533 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
RNF31-216ENST00000559533 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
RNF31-216ENST00000559533 PRDM2Q13029 1718 aa27.52■■■□□ 2
RNF31-216ENST00000559533 IFT140Q96RY7 1462 aa27.43■■□□□ 1.98
RNF31-216ENST00000559533 RIMBP3CA6NJZ7 1639 aa27.41■■□□□ 1.98
RNF31-216ENST00000559533 RIMBP3BA6NNM3 1639 aa27.41■■□□□ 1.98
RNF31-216ENST00000559533 RIMBP3Q9UFD9 1639 aa27.41■■□□□ 1.98
RNF31-216ENST00000559533 ZNF608Q9ULD9 1512 aaPredicted RBP27.4■■□□□ 1.98
RNF31-216ENST00000559533 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
RNF31-216ENST00000559533 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
RNF31-216ENST00000559533 ARHGEF11O15085 1522 aa27.3■■□□□ 1.96
RNF31-216ENST00000559533 ABCC8Q09428 1581 aa27.26■■□□□ 1.95
RNF31-216ENST00000559533 EIF4G3O43432 1585 aaKnown RBP27.25■■□□□ 1.95
RNF31-216ENST00000559533 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
RNF31-216ENST00000559533 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
RNF31-216ENST00000559533 TARBP1Q13395 1621 aaKnown RBP27.11■■□□□ 1.93
RNF31-216ENST00000559533 CHD1O14646 1710 aa27.1■■□□□ 1.93
RNF31-216ENST00000559533 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.934e-7■■■■■ 30.2
RNF31-216ENST00000559533 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
RNF31-216ENST00000559533 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
RNF31-216ENST00000559533 ARAP1Q96P48 1450 aa27■■□□□ 1.91
RNF31-216ENST00000559533 FBLN2P98095 1184 aa26.97■■□□□ 1.91
RNF31-216ENST00000559533 RAD54L2Q9Y4B4 1467 aa26.91■■□□□ 1.9
RNF31-216ENST00000559533 TRHP20396 242 aaPredicted RBP26.88■■□□□ 1.89
RNF31-216ENST00000559533 SOGA1O94964 1423 aa26.88■■□□□ 1.89
RNF31-216ENST00000559533 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
RNF31-216ENST00000559533 WDR97A6NE52 1622 aa26.84■■□□□ 1.89
RNF31-216ENST00000559533 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
RNF31-216ENST00000559533 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
RNF31-216ENST00000559533 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
RNF31-216ENST00000559533 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
RNF31-216ENST00000559533 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
RNF31-216ENST00000559533 CUX1P39880 1505 aa26.72■■□□□ 1.87
RNF31-216ENST00000559533 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
RNF31-216ENST00000559533 GRIN2BQ13224 1484 aa26.71■■□□□ 1.87
RNF31-216ENST00000559533 SYNJ2O15056 1496 aa26.67■■□□□ 1.86
RNF31-216ENST00000559533 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
RNF31-216ENST00000559533 GAPVD1Q14C86 1478 aa26.56■■□□□ 1.84
RNF31-216ENST00000559533 ABCA5Q8WWZ7 1642 aa26.49■■□□□ 1.83
RNF31-216ENST00000559533 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
RNF31-216ENST00000559533 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
RNF31-216ENST00000559533 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
RNF31-216ENST00000559533 ERCC6L2Q5T890 1561 aa26.33■■□□□ 1.8
RNF31-216ENST00000559533 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
RNF31-216ENST00000559533 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
RNF31-216ENST00000559533 NUP160Q12769 1436 aa26.3■■□□□ 1.8
RNF31-216ENST00000559533 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
RNF31-216ENST00000559533 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
RNF31-216ENST00000559533 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
RNF31-216ENST00000559533 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
RNF31-216ENST00000559533 TOP2BQ02880 1626 aa26.2■■□□□ 1.78
RNF31-216ENST00000559533 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
RNF31-216ENST00000559533 PRG4Q92954 1404 aaPredicted RBP26.05■■□□□ 1.76
RNF31-216ENST00000559533 KIF13AQ9H1H9 1805 aa26.05■■□□□ 1.76
RNF31-216ENST00000559533 JPH4Q96JJ6 628 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms