RNA–Protein interactions for RNA: ENST00000559524.5

MEIS3-206, Transcript of Meis homeobox 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MEIS3, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-206ENST00000559524 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
MEIS3-206ENST00000559524 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.8
MEIS3-206ENST00000559524 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
MEIS3-206ENST00000559524 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
MEIS3-206ENST00000559524 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
MEIS3-206ENST00000559524 ABCC9O60706 1549 aa30.75■■■□□ 2.51
MEIS3-206ENST00000559524 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
MEIS3-206ENST00000559524 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
MEIS3-206ENST00000559524 NACADO15069 1562 aa30.29■■■□□ 2.44
MEIS3-206ENST00000559524 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.4
MEIS3-206ENST00000559524 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
MEIS3-206ENST00000559524 SUPT5HO00267 1087 aaKnown RBP29.5■■■□□ 2.31
MEIS3-206ENST00000559524 UNC13AQ9UPW8 1703 aa29.39■■■□□ 2.29
MEIS3-206ENST00000559524 BICRAQ9NZM4 1560 aa29.11■■■□□ 2.25
MEIS3-206ENST00000559524 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
MEIS3-206ENST00000559524 RSF1Q96T23 1441 aaPredicted RBP29.04■■■□□ 2.24
MEIS3-206ENST00000559524 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.24
MEIS3-206ENST00000559524 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
MEIS3-206ENST00000559524 BAZ1AQ9NRL2 1556 aaPredicted RBP28.85■■■□□ 2.21
MEIS3-206ENST00000559524 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
MEIS3-206ENST00000559524 WIZO95785 1651 aa28.65■■■□□ 2.18
MEIS3-206ENST00000559524 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
MEIS3-206ENST00000559524 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
MEIS3-206ENST00000559524 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
MEIS3-206ENST00000559524 EIF4G1Q04637 1599 aaKnown RBP28.23■■■□□ 2.11
MEIS3-206ENST00000559524 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
MEIS3-206ENST00000559524 SMARCA2P51531 1590 aa28.2■■■□□ 2.11
MEIS3-206ENST00000559524 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
MEIS3-206ENST00000559524 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
MEIS3-206ENST00000559524 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
MEIS3-206ENST00000559524 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
MEIS3-206ENST00000559524 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
MEIS3-206ENST00000559524 TRIM41Q8WV44 630 aa27.71■■■□□ 2.03
MEIS3-206ENST00000559524 ABCC8Q09428 1581 aa27.53■■■□□ 2
MEIS3-206ENST00000559524 CFTRP13569 1480 aa27.37■■□□□ 1.97
MEIS3-206ENST00000559524 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
MEIS3-206ENST00000559524 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
MEIS3-206ENST00000559524 FAM9AQ8IZU1 332 aaPredicted RBP27.23■■□□□ 1.95
MEIS3-206ENST00000559524 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
MEIS3-206ENST00000559524 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
MEIS3-206ENST00000559524 PRDM2Q13029 1718 aa27.18■■□□□ 1.94
MEIS3-206ENST00000559524 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
MEIS3-206ENST00000559524 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
MEIS3-206ENST00000559524 SOGA1O94964 1423 aa27.04■■□□□ 1.92
MEIS3-206ENST00000559524 BIVM-ERCC5R4GMW8 1640 aa27.04■■□□□ 1.92
MEIS3-206ENST00000559524 NESP48681 1621 aa27.02■■□□□ 1.92
MEIS3-206ENST00000559524 CUX1P39880 1505 aa27.01■■□□□ 1.91
MEIS3-206ENST00000559524 LAMC3Q9Y6N6 1575 aa26.99■■□□□ 1.91
MEIS3-206ENST00000559524 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
MEIS3-206ENST00000559524 EEA1Q15075 1411 aa26.97■■□□□ 1.91
MEIS3-206ENST00000559524 RUSC2Q8N2Y8 1516 aa26.93■■□□□ 1.9
MEIS3-206ENST00000559524 EHMT2Q96KQ7 1210 aa26.87■■□□□ 1.89
MEIS3-206ENST00000559524 CSRNP3Q8WYN3 585 aa26.84■■□□□ 1.89
MEIS3-206ENST00000559524 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
MEIS3-206ENST00000559524 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
MEIS3-206ENST00000559524 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
MEIS3-206ENST00000559524 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
MEIS3-206ENST00000559524 TOPBP1Q92547 1522 aa26.69■■□□□ 1.86
MEIS3-206ENST00000559524 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
MEIS3-206ENST00000559524 KIF27Q86VH2 1401 aa26.64■■□□□ 1.85
MEIS3-206ENST00000559524 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.85
MEIS3-206ENST00000559524 GOLGA3Q08378 1498 aa26.61■■□□□ 1.85
MEIS3-206ENST00000559524 KIF21BO75037 1637 aa26.61■■□□□ 1.85
MEIS3-206ENST00000559524 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
MEIS3-206ENST00000559524 CUX2O14529 1486 aa26.56■■□□□ 1.84
MEIS3-206ENST00000559524 TNIKQ9UKE5 1360 aa26.55■■□□□ 1.84
MEIS3-206ENST00000559524 UBTFP17480 764 aaKnown RBP26.52■■□□□ 1.84
MEIS3-206ENST00000559524 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
MEIS3-206ENST00000559524 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
MEIS3-206ENST00000559524 PRXQ9BXM0 1461 aa26.48■■□□□ 1.83
MEIS3-206ENST00000559524 ABCA10Q8WWZ4 1543 aa26.47■■□□□ 1.83
MEIS3-206ENST00000559524 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
MEIS3-206ENST00000559524 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
MEIS3-206ENST00000559524 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
MEIS3-206ENST00000559524 IGF1RP08069 1367 aa26.4■■□□□ 1.82
MEIS3-206ENST00000559524 ERCC6Q03468 1493 aa26.35■■□□□ 1.81
MEIS3-206ENST00000559524 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
MEIS3-206ENST00000559524 WDR62O43379 1518 aa26.3■■□□□ 1.8
MEIS3-206ENST00000559524 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
MEIS3-206ENST00000559524 TARBP1Q13395 1621 aaKnown RBP26.26■■□□□ 1.79
MEIS3-206ENST00000559524 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
MEIS3-206ENST00000559524 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
MEIS3-206ENST00000559524 CLIP1P30622 1438 aa26.21■■□□□ 1.79
MEIS3-206ENST00000559524 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
MEIS3-206ENST00000559524 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
MEIS3-206ENST00000559524 CUL7Q14999 1698 aa26.15■■□□□ 1.78
MEIS3-206ENST00000559524 IFT140Q96RY7 1462 aa26.14■■□□□ 1.78
MEIS3-206ENST00000559524 RANGAP1P46060 587 aaPredicted RBP26.1■■□□□ 1.77
MEIS3-206ENST00000559524 AQRO60306 1485 aaKnown RBP eCLIP26.05■■□□□ 1.76
MEIS3-206ENST00000559524 PCGF6Q9BYE7 350 aa26.03■■□□□ 1.76
MEIS3-206ENST00000559524 ZNF608Q9ULD9 1512 aaPredicted RBP26.02■■□□□ 1.76
MEIS3-206ENST00000559524 PBRM1Q86U86 1689 aa26■■□□□ 1.75
MEIS3-206ENST00000559524 TRIM26Q12899 539 aaPredicted RBP25.99■■□□□ 1.75
MEIS3-206ENST00000559524 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
MEIS3-206ENST00000559524 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
MEIS3-206ENST00000559524 PPARGC1BQ86YN6 1023 aaKnown RBP25.93■■□□□ 1.74
MEIS3-206ENST00000559524 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
MEIS3-206ENST00000559524 ARHGAP35Q9NRY4 1499 aa25.91■■□□□ 1.74
MEIS3-206ENST00000559524 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
MEIS3-206ENST00000559524 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms