RNA–Protein interactions for RNA: ENST00000559495.1

AC027088.3-201, humanhuman

TSL 3 BASIC

Gene AC027088.3, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.3-201ENST00000559495 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
AC027088.3-201ENST00000559495 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
AC027088.3-201ENST00000559495 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
AC027088.3-201ENST00000559495 POTEDQ86YR6 584 aa21.27■■□□□ 1
AC027088.3-201ENST00000559495 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
AC027088.3-201ENST00000559495 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
AC027088.3-201ENST00000559495 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
AC027088.3-201ENST00000559495 ABCC9O60706 1549 aa20.17■□□□□ 0.82
AC027088.3-201ENST00000559495 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
AC027088.3-201ENST00000559495 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
AC027088.3-201ENST00000559495 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
AC027088.3-201ENST00000559495 NACADO15069 1562 aa19.7■□□□□ 0.74
AC027088.3-201ENST00000559495 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
AC027088.3-201ENST00000559495 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
AC027088.3-201ENST00000559495 FOXD1Q16676 465 aa19.55■□□□□ 0.72
AC027088.3-201ENST00000559495 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
AC027088.3-201ENST00000559495 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
AC027088.3-201ENST00000559495 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
AC027088.3-201ENST00000559495 MSH5O43196 834 aa18.94■□□□□ 0.62
AC027088.3-201ENST00000559495 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
AC027088.3-201ENST00000559495 BICRAQ9NZM4 1560 aa18.83■□□□□ 0.6
AC027088.3-201ENST00000559495 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
AC027088.3-201ENST00000559495 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
AC027088.3-201ENST00000559495 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
AC027088.3-201ENST00000559495 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
AC027088.3-201ENST00000559495 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
AC027088.3-201ENST00000559495 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
AC027088.3-201ENST00000559495 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
AC027088.3-201ENST00000559495 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
AC027088.3-201ENST00000559495 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
AC027088.3-201ENST00000559495 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
AC027088.3-201ENST00000559495 WIZO95785 1651 aa18.17■□□□□ 0.5
AC027088.3-201ENST00000559495 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
AC027088.3-201ENST00000559495 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
AC027088.3-201ENST00000559495 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
AC027088.3-201ENST00000559495 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
AC027088.3-201ENST00000559495 TOP2AP11388 1531 aaKnown RBP18.06■□□□□ 0.48
AC027088.3-201ENST00000559495 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
AC027088.3-201ENST00000559495 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
AC027088.3-201ENST00000559495 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
AC027088.3-201ENST00000559495 CADPSQ9ULU8 1353 aa17.65■□□□□ 0.42
AC027088.3-201ENST00000559495 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
AC027088.3-201ENST00000559495 CFTRP13569 1480 aa17.59■□□□□ 0.41
AC027088.3-201ENST00000559495 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
AC027088.3-201ENST00000559495 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
AC027088.3-201ENST00000559495 NESP48681 1621 aa17.5■□□□□ 0.39
AC027088.3-201ENST00000559495 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
AC027088.3-201ENST00000559495 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
AC027088.3-201ENST00000559495 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
AC027088.3-201ENST00000559495 KIF21AQ7Z4S6 1674 aa17.35■□□□□ 0.37
AC027088.3-201ENST00000559495 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
AC027088.3-201ENST00000559495 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
AC027088.3-201ENST00000559495 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
AC027088.3-201ENST00000559495 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
AC027088.3-201ENST00000559495 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
AC027088.3-201ENST00000559495 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
AC027088.3-201ENST00000559495 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
AC027088.3-201ENST00000559495 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
AC027088.3-201ENST00000559495 CUX1P39880 1505 aa17.18■□□□□ 0.34
AC027088.3-201ENST00000559495 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
AC027088.3-201ENST00000559495 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
AC027088.3-201ENST00000559495 WDR62O43379 1518 aa17.16■□□□□ 0.34
AC027088.3-201ENST00000559495 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
AC027088.3-201ENST00000559495 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
AC027088.3-201ENST00000559495 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
AC027088.3-201ENST00000559495 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
AC027088.3-201ENST00000559495 SOGA1O94964 1423 aa17.07■□□□□ 0.32
AC027088.3-201ENST00000559495 CUX2O14529 1486 aa17.05■□□□□ 0.32
AC027088.3-201ENST00000559495 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
AC027088.3-201ENST00000559495 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
AC027088.3-201ENST00000559495 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
AC027088.3-201ENST00000559495 EEA1Q15075 1411 aa16.98■□□□□ 0.31
AC027088.3-201ENST00000559495 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
AC027088.3-201ENST00000559495 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
AC027088.3-201ENST00000559495 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
AC027088.3-201ENST00000559495 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
AC027088.3-201ENST00000559495 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
AC027088.3-201ENST00000559495 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
AC027088.3-201ENST00000559495 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
AC027088.3-201ENST00000559495 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
AC027088.3-201ENST00000559495 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
AC027088.3-201ENST00000559495 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
AC027088.3-201ENST00000559495 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
AC027088.3-201ENST00000559495 ADRA2BP18089 450 aa16.82■□□□□ 0.28
AC027088.3-201ENST00000559495 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
AC027088.3-201ENST00000559495 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
AC027088.3-201ENST00000559495 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
AC027088.3-201ENST00000559495 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
AC027088.3-201ENST00000559495 CUL7Q14999 1698 aa16.77■□□□□ 0.28
AC027088.3-201ENST00000559495 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
AC027088.3-201ENST00000559495 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
AC027088.3-201ENST00000559495 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
AC027088.3-201ENST00000559495 IGF1RP08069 1367 aa16.73■□□□□ 0.27
AC027088.3-201ENST00000559495 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
AC027088.3-201ENST00000559495 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
AC027088.3-201ENST00000559495 FBLN2P98095 1184 aa16.71■□□□□ 0.27
AC027088.3-201ENST00000559495 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
AC027088.3-201ENST00000559495 RAPGEF2Q9Y4G8 1499 aa16.69■□□□□ 0.26
AC027088.3-201ENST00000559495 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
AC027088.3-201ENST00000559495 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms