RNA–Protein interactions for RNA: ENST00000559430.1

PCSK6-209, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 3

Gene PCSK6, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-209ENST00000559430 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
PCSK6-209ENST00000559430 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
PCSK6-209ENST00000559430 ABCC9O60706 1549 aa28.21■■■□□ 2.11
PCSK6-209ENST00000559430 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
PCSK6-209ENST00000559430 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
PCSK6-209ENST00000559430 NACADO15069 1562 aa26.95■■□□□ 1.9
PCSK6-209ENST00000559430 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
PCSK6-209ENST00000559430 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
PCSK6-209ENST00000559430 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
PCSK6-209ENST00000559430 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
PCSK6-209ENST00000559430 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
PCSK6-209ENST00000559430 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
PCSK6-209ENST00000559430 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
PCSK6-209ENST00000559430 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
PCSK6-209ENST00000559430 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
PCSK6-209ENST00000559430 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
PCSK6-209ENST00000559430 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
PCSK6-209ENST00000559430 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
PCSK6-209ENST00000559430 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
PCSK6-209ENST00000559430 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
PCSK6-209ENST00000559430 SMARCA2P51531 1590 aa24.86■■□□□ 1.57
PCSK6-209ENST00000559430 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.57
PCSK6-209ENST00000559430 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
PCSK6-209ENST00000559430 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
PCSK6-209ENST00000559430 BAZ1BQ9UIG0 1483 aaKnown RBP24.72■■□□□ 1.55
PCSK6-209ENST00000559430 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
PCSK6-209ENST00000559430 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
PCSK6-209ENST00000559430 WIZO95785 1651 aa24.49■■□□□ 1.51
PCSK6-209ENST00000559430 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
PCSK6-209ENST00000559430 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
PCSK6-209ENST00000559430 NESP48681 1621 aa24.31■■□□□ 1.48
PCSK6-209ENST00000559430 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
PCSK6-209ENST00000559430 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
PCSK6-209ENST00000559430 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
PCSK6-209ENST00000559430 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
PCSK6-209ENST00000559430 CUX2O14529 1486 aa24.08■■□□□ 1.45
PCSK6-209ENST00000559430 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
PCSK6-209ENST00000559430 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
PCSK6-209ENST00000559430 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
PCSK6-209ENST00000559430 CFTRP13569 1480 aa23.93■■□□□ 1.42
PCSK6-209ENST00000559430 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
PCSK6-209ENST00000559430 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
PCSK6-209ENST00000559430 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
PCSK6-209ENST00000559430 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
PCSK6-209ENST00000559430 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
PCSK6-209ENST00000559430 WDR62O43379 1518 aa23.74■■□□□ 1.39
PCSK6-209ENST00000559430 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
PCSK6-209ENST00000559430 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
PCSK6-209ENST00000559430 DNAJC5Q9H3Z4 198 aa23.49■■□□□ 1.35
PCSK6-209ENST00000559430 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
PCSK6-209ENST00000559430 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
PCSK6-209ENST00000559430 IFT140Q96RY7 1462 aa23.39■■□□□ 1.34
PCSK6-209ENST00000559430 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
PCSK6-209ENST00000559430 ZNF608Q9ULD9 1512 aaPredicted RBP23.25■■□□□ 1.31
PCSK6-209ENST00000559430 CUX1P39880 1505 aa23.23■■□□□ 1.31
PCSK6-209ENST00000559430 SOGA1O94964 1423 aa23.22■■□□□ 1.31
PCSK6-209ENST00000559430 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
PCSK6-209ENST00000559430 RAD54L2Q9Y4B4 1467 aa23.18■■□□□ 1.3
PCSK6-209ENST00000559430 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
PCSK6-209ENST00000559430 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
PCSK6-209ENST00000559430 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.294e-7■□□□□ 9.4
PCSK6-209ENST00000559430 OSCARQ8IYS5 282 aa23.14■■□□□ 1.29
PCSK6-209ENST00000559430 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
PCSK6-209ENST00000559430 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
PCSK6-209ENST00000559430 FBLN2P98095 1184 aa23.07■■□□□ 1.28
PCSK6-209ENST00000559430 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
PCSK6-209ENST00000559430 TOP2BQ02880 1626 aa23■■□□□ 1.27
PCSK6-209ENST00000559430 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
PCSK6-209ENST00000559430 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
PCSK6-209ENST00000559430 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
PCSK6-209ENST00000559430 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
PCSK6-209ENST00000559430 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
PCSK6-209ENST00000559430 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
PCSK6-209ENST00000559430 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
PCSK6-209ENST00000559430 CHD1O14646 1710 aa22.92■■□□□ 1.26
PCSK6-209ENST00000559430 MAGI1Q96QZ7 1491 aaPredicted RBP22.89■■□□□ 1.25
PCSK6-209ENST00000559430 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
PCSK6-209ENST00000559430 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
PCSK6-209ENST00000559430 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
PCSK6-209ENST00000559430 SYNJ2O15056 1496 aa22.8■■□□□ 1.24
PCSK6-209ENST00000559430 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
PCSK6-209ENST00000559430 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
PCSK6-209ENST00000559430 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
PCSK6-209ENST00000559430 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
PCSK6-209ENST00000559430 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
PCSK6-209ENST00000559430 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
PCSK6-209ENST00000559430 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
PCSK6-209ENST00000559430 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
PCSK6-209ENST00000559430 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
PCSK6-209ENST00000559430 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
PCSK6-209ENST00000559430 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
PCSK6-209ENST00000559430 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
PCSK6-209ENST00000559430 IGF1RP08069 1367 aa22.49■■□□□ 1.19
PCSK6-209ENST00000559430 CUL7Q14999 1698 aa22.49■■□□□ 1.19
PCSK6-209ENST00000559430 NUP160Q12769 1436 aa22.48■■□□□ 1.19
PCSK6-209ENST00000559430 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
PCSK6-209ENST00000559430 CARMIL1Q5VZK9 1371 aa22.42■■□□□ 1.18
PCSK6-209ENST00000559430 JPH4Q96JJ6 628 aa22.35■■□□□ 1.17
PCSK6-209ENST00000559430 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
PCSK6-209ENST00000559430 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms