RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 NISCHQ9Y2I1 1504 aa41.74■■■■■ 4.27
PSEN1-224ENST00000559361 ABCC9O60706 1549 aa38.03■■■■□ 3.68
PSEN1-224ENST00000559361 CCDC180Q9P1Z9 1646 aa37.64■■■■□ 3.62
PSEN1-224ENST00000559361 DNAJC5BQ9UF47 199 aa36.2■■■■□ 3.39
PSEN1-224ENST00000559361 RB1CC1Q8TDY2 1594 aa36.03■■■■□ 3.36
PSEN1-224ENST00000559361 NACADO15069 1562 aa35.72■■■■□ 3.31
PSEN1-224ENST00000559361 PABPN1Q86U42 306 aaKnown RBP eCLIP35.36■■■■□ 3.25
PSEN1-224ENST00000559361 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
PSEN1-224ENST00000559361 UNC13AQ9UPW8 1703 aa35.26■■■■□ 3.23
PSEN1-224ENST00000559361 MYO15BQ96JP2 1530 aa35.13■■■■□ 3.21
PSEN1-224ENST00000559361 BICRAQ9NZM4 1560 aa35.07■■■■□ 3.2
PSEN1-224ENST00000559361 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
PSEN1-224ENST00000559361 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
PSEN1-224ENST00000559361 ZCCHC6Q5VYS8 1495 aaKnown RBP34.48■■■■□ 3.11
PSEN1-224ENST00000559361 CC2D2AQ9P2K1 1620 aa34.37■■■■□ 3.09
PSEN1-224ENST00000559361 CECR2Q9BXF3 1484 aa34.34■■■■□ 3.09
PSEN1-224ENST00000559361 EIF4G1Q04637 1599 aaKnown RBP34.19■■■■□ 3.06
PSEN1-224ENST00000559361 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
PSEN1-224ENST00000559361 DNAJC5Q9H3Z4 198 aa33.58■■■□□ 2.97
PSEN1-224ENST00000559361 CUX2O14529 1486 aa33.03■■■□□ 2.88
PSEN1-224ENST00000559361 NCAPD3P42695 1498 aa33.01■■■□□ 2.88
PSEN1-224ENST00000559361 ERCC6Q03468 1493 aa32.85■■■□□ 2.85
PSEN1-224ENST00000559361 ATAD2BQ9ULI0 1458 aa32.81■■■□□ 2.84
PSEN1-224ENST00000559361 HMGXB3Q12766 1538 aa32.68■■■□□ 2.82
PSEN1-224ENST00000559361 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
PSEN1-224ENST00000559361 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
PSEN1-224ENST00000559361 NESP48681 1621 aa32.58■■■□□ 2.81
PSEN1-224ENST00000559361 BAZ1BQ9UIG0 1483 aaKnown RBP32.41■■■□□ 2.78
PSEN1-224ENST00000559361 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
PSEN1-224ENST00000559361 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
PSEN1-224ENST00000559361 THOC2Q8NI27 1593 aaKnown RBP32.35■■■□□ 2.77
PSEN1-224ENST00000559361 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
PSEN1-224ENST00000559361 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
PSEN1-224ENST00000559361 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
PSEN1-224ENST00000559361 PDS5BQ9NTI5 1447 aa32.11■■■□□ 2.73
PSEN1-224ENST00000559361 CADPSQ9ULU8 1353 aa31.96■■■□□ 2.71
PSEN1-224ENST00000559361 MRC2Q9UBG0 1479 aa31.85■■■□□ 2.69
PSEN1-224ENST00000559361 WDR62O43379 1518 aa31.81■■■□□ 2.68
PSEN1-224ENST00000559361 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
PSEN1-224ENST00000559361 WIZO95785 1651 aa31.72■■■□□ 2.67
PSEN1-224ENST00000559361 CEP164Q9UPV0 1460 aa31.61■■■□□ 2.65
PSEN1-224ENST00000559361 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
PSEN1-224ENST00000559361 CFTRP13569 1480 aa31.51■■■□□ 2.63
PSEN1-224ENST00000559361 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
PSEN1-224ENST00000559361 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
PSEN1-224ENST00000559361 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
PSEN1-224ENST00000559361 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
PSEN1-224ENST00000559361 PRDM2Q13029 1718 aa31.11■■■□□ 2.57
PSEN1-224ENST00000559361 RIMBP3CA6NJZ7 1639 aa31.06■■■□□ 2.56
PSEN1-224ENST00000559361 RIMBP3BA6NNM3 1639 aa31.06■■■□□ 2.56
PSEN1-224ENST00000559361 RIMBP3Q9UFD9 1639 aa31.06■■■□□ 2.56
PSEN1-224ENST00000559361 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
PSEN1-224ENST00000559361 IFT140Q96RY7 1462 aa31.02■■■□□ 2.56
PSEN1-224ENST00000559361 CCDC88BA6NC98 1476 aa30.96■■■□□ 2.55
PSEN1-224ENST00000559361 ARHGEF11O15085 1522 aa30.92■■■□□ 2.54
PSEN1-224ENST00000559361 TOPBP1Q92547 1522 aa30.92■■■□□ 2.54
PSEN1-224ENST00000559361 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
PSEN1-224ENST00000559361 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
PSEN1-224ENST00000559361 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
PSEN1-224ENST00000559361 CYB5RLQ6IPT4 315 aa30.71■■■□□ 2.51
PSEN1-224ENST00000559361 TARBP1Q13395 1621 aaKnown RBP30.7■■■□□ 2.51
PSEN1-224ENST00000559361 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.5
PSEN1-224ENST00000559361 CHD1O14646 1710 aa30.67■■■□□ 2.5
PSEN1-224ENST00000559361 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
PSEN1-224ENST00000559361 POLA1P09884 1462 aaPredicted RBP30.57■■■□□ 2.48
PSEN1-224ENST00000559361 FBLN2P98095 1184 aa30.5■■■□□ 2.47
PSEN1-224ENST00000559361 RAD54L2Q9Y4B4 1467 aa30.46■■■□□ 2.47
PSEN1-224ENST00000559361 TRHP20396 242 aaPredicted RBP30.46■■■□□ 2.47
PSEN1-224ENST00000559361 SOGA1O94964 1423 aa30.42■■■□□ 2.46
PSEN1-224ENST00000559361 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
PSEN1-224ENST00000559361 WDR97A6NE52 1622 aa30.36■■■□□ 2.45
PSEN1-224ENST00000559361 CLASP1Q7Z460 1538 aa30.34■■■□□ 2.45
PSEN1-224ENST00000559361 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
PSEN1-224ENST00000559361 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
PSEN1-224ENST00000559361 MAGI1Q96QZ7 1491 aaPredicted RBP30.26■■■□□ 2.44
PSEN1-224ENST00000559361 CHMP7Q8WUX9 453 aaPredicted RBP30.25■■■□□ 2.43
PSEN1-224ENST00000559361 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
PSEN1-224ENST00000559361 CUX1P39880 1505 aa30.22■■■□□ 2.43
PSEN1-224ENST00000559361 GRIN2BQ13224 1484 aa30.21■■■□□ 2.43
PSEN1-224ENST00000559361 SYNJ2O15056 1496 aa30.17■■■□□ 2.42
PSEN1-224ENST00000559361 GAPVD1Q14C86 1478 aa30.05■■■□□ 2.4
PSEN1-224ENST00000559361 PBRM1Q86U86 1689 aa30.03■■■□□ 2.4
PSEN1-224ENST00000559361 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
PSEN1-224ENST00000559361 ABCA5Q8WWZ7 1642 aa29.94■■■□□ 2.38
PSEN1-224ENST00000559361 AEBP2Q6ZN18 517 aaPredicted RBP29.89■■■□□ 2.38
PSEN1-224ENST00000559361 ERCC6L2Q5T890 1561 aa29.82■■■□□ 2.36
PSEN1-224ENST00000559361 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
PSEN1-224ENST00000559361 NUP160Q12769 1436 aa29.78■■■□□ 2.36
PSEN1-224ENST00000559361 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
PSEN1-224ENST00000559361 CEP170Q5SW79 1584 aa29.74■■■□□ 2.35
PSEN1-224ENST00000559361 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
PSEN1-224ENST00000559361 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
PSEN1-224ENST00000559361 SHROOM2Q13796 1616 aa29.7■■■□□ 2.34
PSEN1-224ENST00000559361 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
PSEN1-224ENST00000559361 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
PSEN1-224ENST00000559361 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
PSEN1-224ENST00000559361 ERICH3Q5RHP9 1530 aa29.57■■■□□ 2.32
PSEN1-224ENST00000559361 KIF13AQ9H1H9 1805 aa29.55■■■□□ 2.32
PSEN1-224ENST00000559361 PRG4Q92954 1404 aaPredicted RBP29.48■■■□□ 2.31
PSEN1-224ENST00000559361 JPH4Q96JJ6 628 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms