RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-219ENST00000559328 NISCHQ9Y2I1 1504 aa49.04■■■■■ 5.44
MARK3-219ENST00000559328 CCDC180Q9P1Z9 1646 aa43.44■■■■■ 4.55
MARK3-219ENST00000559328 ABCC9O60706 1549 aa42■■■■■ 4.31
MARK3-219ENST00000559328 ZCCHC6Q5VYS8 1495 aaKnown RBP40.96■■■■■ 4.15
MARK3-219ENST00000559328 DCAF8L2P0C7V8 631 aa40.77■■■■■ 4.12
MARK3-219ENST00000559328 NACADO15069 1562 aa40.69■■■■■ 4.11
MARK3-219ENST00000559328 RB1CC1Q8TDY2 1594 aa40.63■■■■■ 4.09
MARK3-219ENST00000559328 DCAF1Q9Y4B6 1507 aa40.59■■■■■ 4.09
MARK3-219ENST00000559328 MYO15BQ96JP2 1530 aa40.57■■■■■ 4.09
MARK3-219ENST00000559328 UNC13AQ9UPW8 1703 aa39.83■■■■□ 3.97
MARK3-219ENST00000559328 SCRIBQ14160 1630 aa39.67■■■■□ 3.94
MARK3-219ENST00000559328 BICRAQ9NZM4 1560 aa39.4■■■■□ 3.9
MARK3-219ENST00000559328 PABPN1Q86U42 306 aaKnown RBP eCLIP39.31■■■■□ 3.88
MARK3-219ENST00000559328 SHROOM4Q9ULL8 1493 aa39.04■■■■□ 3.84
MARK3-219ENST00000559328 EIF4G1Q04637 1599 aaKnown RBP38.31■■■■□ 3.72
MARK3-219ENST00000559328 CECR2Q9BXF3 1484 aa38.15■■■■□ 3.7
MARK3-219ENST00000559328 DNAJC5BQ9UF47 199 aa38.09■■■■□ 3.69
MARK3-219ENST00000559328 CC2D2AQ9P2K1 1620 aa38.05■■■■□ 3.68
MARK3-219ENST00000559328 SMARCA4P51532 1647 aa37.99■■■■□ 3.67
MARK3-219ENST00000559328 BAZ1AQ9NRL2 1556 aaPredicted RBP37.99■■■■□ 3.67
MARK3-219ENST00000559328 MROH2BQ7Z745 1585 aa37.82■■■■□ 3.65
MARK3-219ENST00000559328 ATAD2BQ9ULI0 1458 aa37.62■■■■□ 3.61
MARK3-219ENST00000559328 SMARCA2P51531 1590 aa37.61■■■■□ 3.61
MARK3-219ENST00000559328 PEG3Q9GZU2 1588 aa37.58■■■■□ 3.61
MARK3-219ENST00000559328 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
MARK3-219ENST00000559328 NCAPD3P42695 1498 aa37.51■■■■□ 3.59
MARK3-219ENST00000559328 WIZO95785 1651 aa37.49■■■■□ 3.59
MARK3-219ENST00000559328 HMGXB3Q12766 1538 aa37.4■■■■□ 3.58
MARK3-219ENST00000559328 BAZ1BQ9UIG0 1483 aaKnown RBP37.34■■■■□ 3.57
MARK3-219ENST00000559328 TOP2AP11388 1531 aaKnown RBP37.07■■■■□ 3.53
MARK3-219ENST00000559328 SUPT5HO00267 1087 aaKnown RBP36.95■■■■□ 3.51
MARK3-219ENST00000559328 CCDC88BA6NC98 1476 aa36.62■■■■□ 3.45
MARK3-219ENST00000559328 NESP48681 1621 aa36.5■■■■□ 3.43
MARK3-219ENST00000559328 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
MARK3-219ENST00000559328 CADPSQ9ULU8 1353 aa36.44■■■■□ 3.42
MARK3-219ENST00000559328 CFTRP13569 1480 aa36.33■■■■□ 3.41
MARK3-219ENST00000559328 PRDM2Q13029 1718 aa36.24■■■■□ 3.39
MARK3-219ENST00000559328 PDS5BQ9NTI5 1447 aa36.18■■■■□ 3.38
MARK3-219ENST00000559328 ERCC6Q03468 1493 aa36.16■■■■□ 3.38
MARK3-219ENST00000559328 KIF21AQ7Z4S6 1674 aa36.16■■■■□ 3.38
MARK3-219ENST00000559328 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
MARK3-219ENST00000559328 CEP164Q9UPV0 1460 aa35.96■■■■□ 3.35
MARK3-219ENST00000559328 THOC2Q8NI27 1593 aaKnown RBP35.87■■■■□ 3.33
MARK3-219ENST00000559328 MRC2Q9UBG0 1479 aa35.8■■■■□ 3.32
MARK3-219ENST00000559328 WDR62O43379 1518 aa35.68■■■■□ 3.3
MARK3-219ENST00000559328 URB2Q14146 1524 aaKnown RBP35.67■■■■□ 3.3
MARK3-219ENST00000559328 CUX2O14529 1486 aa35.6■■■■□ 3.29
MARK3-219ENST00000559328 DNMBPQ6XZF7 1577 aa35.55■■■■□ 3.28
MARK3-219ENST00000559328 ABCC8Q09428 1581 aa35.55■■■■□ 3.28
MARK3-219ENST00000559328 TOPBP1Q92547 1522 aa35.53■■■■□ 3.28
MARK3-219ENST00000559328 CUX1P39880 1505 aa35.45■■■■□ 3.27
MARK3-219ENST00000559328 WRNQ14191 1432 aaPredicted RBP eCLIP35.38■■■■□ 3.25
MARK3-219ENST00000559328 SYNJ1O43426 1573 aa35.31■■■■□ 3.24
MARK3-219ENST00000559328 BIVM-ERCC5R4GMW8 1640 aa35.31■■■■□ 3.24
MARK3-219ENST00000559328 TOP2BQ02880 1626 aa35.29■■■■□ 3.24
MARK3-219ENST00000559328 POLA1P09884 1462 aaPredicted RBP35.26■■■■□ 3.23
MARK3-219ENST00000559328 FGD5Q6ZNL6 1462 aa35.25■■■■□ 3.23
MARK3-219ENST00000559328 IFT140Q96RY7 1462 aa35.17■■■■□ 3.22
MARK3-219ENST00000559328 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
MARK3-219ENST00000559328 SOGA1O94964 1423 aa35.11■■■■□ 3.21
MARK3-219ENST00000559328 RAD54L2Q9Y4B4 1467 aa35.1■■■■□ 3.21
MARK3-219ENST00000559328 WDR97A6NE52 1622 aa35■■■■□ 3.19
MARK3-219ENST00000559328 ZNF608Q9ULD9 1512 aaPredicted RBP34.99■■■■□ 3.19
MARK3-219ENST00000559328 ABCA10Q8WWZ4 1543 aa34.92■■■■□ 3.18
MARK3-219ENST00000559328 EIF4G3O43432 1585 aaKnown RBP34.91■■■■□ 3.18
MARK3-219ENST00000559328 TRIM41Q8WV44 630 aa34.86■■■■□ 3.17
MARK3-219ENST00000559328 TDRD9Q8NDG6 1382 aaKnown RBP34.85■■■■□ 3.17
MARK3-219ENST00000559328 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.177e-9■■■■□ 20.6
MARK3-219ENST00000559328 ABCA5Q8WWZ7 1642 aa34.78■■■■□ 3.16
MARK3-219ENST00000559328 CHIC1Q5VXU3 224 aa34.76■■■■□ 3.16
MARK3-219ENST00000559328 GAPVD1Q14C86 1478 aa34.72■■■■□ 3.15
MARK3-219ENST00000559328 PBRM1Q86U86 1689 aa34.71■■■■□ 3.15
MARK3-219ENST00000559328 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
MARK3-219ENST00000559328 KIF27Q86VH2 1401 aa34.6■■■■□ 3.13
MARK3-219ENST00000559328 SNAPC4Q5SXM2 1469 aa34.55■■■■□ 3.12
MARK3-219ENST00000559328 ERICH3Q5RHP9 1530 aa34.52■■■■□ 3.12
MARK3-219ENST00000559328 MAGI1Q96QZ7 1491 aaPredicted RBP34.51■■■■□ 3.11
MARK3-219ENST00000559328 RUSC2Q8N2Y8 1516 aa34.46■■■■□ 3.11
MARK3-219ENST00000559328 CHD1O14646 1710 aa34.43■■■■□ 3.1
MARK3-219ENST00000559328 ADAMTS12P58397 1594 aa34.4■■■■□ 3.1
MARK3-219ENST00000559328 IGF1RP08069 1367 aa34.38■■■■□ 3.09
MARK3-219ENST00000559328 SYNJ2O15056 1496 aa34.36■■■■□ 3.09
MARK3-219ENST00000559328 CUL7Q14999 1698 aa34.34■■■■□ 3.09
MARK3-219ENST00000559328 FHAD1B1AJZ9 1412 aa34.33■■■■□ 3.09
MARK3-219ENST00000559328 FBLN2P98095 1184 aa34.33■■■■□ 3.09
MARK3-219ENST00000559328 CHMP7Q8WUX9 453 aaPredicted RBP34.3■■■■□ 3.08
MARK3-219ENST00000559328 EEA1Q15075 1411 aa34.25■■■■□ 3.07
MARK3-219ENST00000559328 GRIN2AQ12879 1464 aa34.21■■■■□ 3.07
MARK3-219ENST00000559328 CARMIL1Q5VZK9 1371 aa34.21■■■■□ 3.07
MARK3-219ENST00000559328 OSCARQ8IYS5 282 aa34.19■■■■□ 3.06
MARK3-219ENST00000559328 FAM9AQ8IZU1 332 aaPredicted RBP34.15■■■■□ 3.06
MARK3-219ENST00000559328 CSRNP3Q8WYN3 585 aa34.13■■■■□ 3.05
MARK3-219ENST00000559328 RAPGEF2Q9Y4G8 1499 aa34.07■■■■□ 3.04
MARK3-219ENST00000559328 PRXQ9BXM0 1461 aa34.05■■■■□ 3.04
MARK3-219ENST00000559328 CEP170Q5SW79 1584 aa34.05■■■■□ 3.04
MARK3-219ENST00000559328 NUP160Q12769 1436 aa34.03■■■■□ 3.04
MARK3-219ENST00000559328 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
MARK3-219ENST00000559328 KIF21BO75037 1637 aa33.91■■■■□ 3.02
MARK3-219ENST00000559328 DNAJC5Q9H3Z4 198 aa33.91■■■■□ 3.02
MARK3-219ENST00000559328 CTTNBP2Q8WZ74 1663 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms