RNA–Protein interactions for RNA: ENST00000559211.1

AC060809.1-201, humanhuman

TSL 4 BASIC

Gene AC060809.1, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC060809.1-201ENST00000559211 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
AC060809.1-201ENST00000559211 AEBP2Q6ZN18 517 aaPredicted RBP15.51■□□□□ 0.07
AC060809.1-201ENST00000559211 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
AC060809.1-201ENST00000559211 CHIC1Q5VXU3 224 aa14.46□□□□□ -0.09
AC060809.1-201ENST00000559211 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
AC060809.1-201ENST00000559211 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
AC060809.1-201ENST00000559211 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
AC060809.1-201ENST00000559211 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
AC060809.1-201ENST00000559211 ABCC9O60706 1549 aa13.99□□□□□ -0.17
AC060809.1-201ENST00000559211 SHROOM4Q9ULL8 1493 aa13.92□□□□□ -0.18
AC060809.1-201ENST00000559211 NACADO15069 1562 aa13.88□□□□□ -0.19
AC060809.1-201ENST00000559211 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
AC060809.1-201ENST00000559211 SCRIBQ14160 1630 aa13.68□□□□□ -0.22
AC060809.1-201ENST00000559211 SUPT5HO00267 1087 aaKnown RBP13.42□□□□□ -0.26
AC060809.1-201ENST00000559211 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
AC060809.1-201ENST00000559211 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
AC060809.1-201ENST00000559211 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
AC060809.1-201ENST00000559211 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
AC060809.1-201ENST00000559211 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
AC060809.1-201ENST00000559211 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
AC060809.1-201ENST00000559211 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
AC060809.1-201ENST00000559211 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC060809.1-201ENST00000559211 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
AC060809.1-201ENST00000559211 WIZO95785 1651 aa13.07□□□□□ -0.32
AC060809.1-201ENST00000559211 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
AC060809.1-201ENST00000559211 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.33
AC060809.1-201ENST00000559211 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
AC060809.1-201ENST00000559211 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
AC060809.1-201ENST00000559211 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
AC060809.1-201ENST00000559211 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
AC060809.1-201ENST00000559211 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
AC060809.1-201ENST00000559211 CCDC88BA6NC98 1476 aa12.83□□□□□ -0.36
AC060809.1-201ENST00000559211 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
AC060809.1-201ENST00000559211 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
AC060809.1-201ENST00000559211 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
AC060809.1-201ENST00000559211 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
AC060809.1-201ENST00000559211 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
AC060809.1-201ENST00000559211 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
AC060809.1-201ENST00000559211 CFTRP13569 1480 aa12.54□□□□□ -0.4
AC060809.1-201ENST00000559211 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
AC060809.1-201ENST00000559211 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.41
AC060809.1-201ENST00000559211 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
AC060809.1-201ENST00000559211 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
AC060809.1-201ENST00000559211 EEA1Q15075 1411 aa12.43□□□□□ -0.42
AC060809.1-201ENST00000559211 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
AC060809.1-201ENST00000559211 FOXD1Q16676 465 aa12.41□□□□□ -0.42
AC060809.1-201ENST00000559211 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
AC060809.1-201ENST00000559211 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
AC060809.1-201ENST00000559211 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
AC060809.1-201ENST00000559211 FAM9AQ8IZU1 332 aaPredicted RBP12.36□□□□□ -0.43
AC060809.1-201ENST00000559211 LOC105371045A0A1W2PR82 267 aa12.35□□□□□ -0.43
AC060809.1-201ENST00000559211 CUX1P39880 1505 aa12.35□□□□□ -0.43
AC060809.1-201ENST00000559211 SOGA1O94964 1423 aa12.35□□□□□ -0.43
AC060809.1-201ENST00000559211 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
AC060809.1-201ENST00000559211 NESP48681 1621 aa12.29□□□□□ -0.44
AC060809.1-201ENST00000559211 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.44
AC060809.1-201ENST00000559211 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
AC060809.1-201ENST00000559211 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
AC060809.1-201ENST00000559211 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
AC060809.1-201ENST00000559211 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
AC060809.1-201ENST00000559211 GOLGA3Q08378 1498 aa12.24□□□□□ -0.45
AC060809.1-201ENST00000559211 KIF21BO75037 1637 aa12.23□□□□□ -0.45
AC060809.1-201ENST00000559211 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.45
AC060809.1-201ENST00000559211 TOPBP1Q92547 1522 aa12.21□□□□□ -0.46
AC060809.1-201ENST00000559211 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
AC060809.1-201ENST00000559211 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
AC060809.1-201ENST00000559211 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
AC060809.1-201ENST00000559211 ERICH3Q5RHP9 1530 aa12.16□□□□□ -0.46
AC060809.1-201ENST00000559211 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
AC060809.1-201ENST00000559211 CUX2O14529 1486 aa12.14□□□□□ -0.47
AC060809.1-201ENST00000559211 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
AC060809.1-201ENST00000559211 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
AC060809.1-201ENST00000559211 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
AC060809.1-201ENST00000559211 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
AC060809.1-201ENST00000559211 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
AC060809.1-201ENST00000559211 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
AC060809.1-201ENST00000559211 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
AC060809.1-201ENST00000559211 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
AC060809.1-201ENST00000559211 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.48
AC060809.1-201ENST00000559211 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
AC060809.1-201ENST00000559211 IGF1RP08069 1367 aa12.05□□□□□ -0.48
AC060809.1-201ENST00000559211 WDR62O43379 1518 aa12.05□□□□□ -0.48
AC060809.1-201ENST00000559211 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.49
AC060809.1-201ENST00000559211 CLIP1P30622 1438 aa12.02□□□□□ -0.49
AC060809.1-201ENST00000559211 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
AC060809.1-201ENST00000559211 TARBP1Q13395 1621 aaKnown RBP12.01□□□□□ -0.49
AC060809.1-201ENST00000559211 CUL7Q14999 1698 aa12.01□□□□□ -0.49
AC060809.1-201ENST00000559211 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
AC060809.1-201ENST00000559211 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
AC060809.1-201ENST00000559211 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
AC060809.1-201ENST00000559211 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
AC060809.1-201ENST00000559211 GAPVD1Q14C86 1478 aa11.97□□□□□ -0.49
AC060809.1-201ENST00000559211 TDRD9Q8NDG6 1382 aaKnown RBP11.94□□□□□ -0.5
AC060809.1-201ENST00000559211 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
AC060809.1-201ENST00000559211 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
AC060809.1-201ENST00000559211 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
AC060809.1-201ENST00000559211 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
AC060809.1-201ENST00000559211 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
AC060809.1-201ENST00000559211 PCGF6Q9BYE7 350 aa11.88□□□□□ -0.51
AC060809.1-201ENST00000559211 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms