RNA–Protein interactions for RNA: ENST00000559205.1

IDH3A-213, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4 BASIC

Gene IDH3A, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-213ENST00000559205 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
IDH3A-213ENST00000559205 ABCC9O60706 1549 aa28.74■■■□□ 2.19
IDH3A-213ENST00000559205 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
IDH3A-213ENST00000559205 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
IDH3A-213ENST00000559205 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
IDH3A-213ENST00000559205 NACADO15069 1562 aa26.78■■□□□ 1.88
IDH3A-213ENST00000559205 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
IDH3A-213ENST00000559205 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
IDH3A-213ENST00000559205 UNC13AQ9UPW8 1703 aa26.66■■□□□ 1.86
IDH3A-213ENST00000559205 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
IDH3A-213ENST00000559205 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
IDH3A-213ENST00000559205 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
IDH3A-213ENST00000559205 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
IDH3A-213ENST00000559205 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
IDH3A-213ENST00000559205 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
IDH3A-213ENST00000559205 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.73
IDH3A-213ENST00000559205 EIF4G1Q04637 1599 aaKnown RBP25.74■■□□□ 1.71
IDH3A-213ENST00000559205 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
IDH3A-213ENST00000559205 DNAJC5Q9H3Z4 198 aa25.21■■□□□ 1.63
IDH3A-213ENST00000559205 NCAPD3P42695 1498 aa24.78■■□□□ 1.56
IDH3A-213ENST00000559205 CUX2O14529 1486 aa24.72■■□□□ 1.55
IDH3A-213ENST00000559205 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.55
IDH3A-213ENST00000559205 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
IDH3A-213ENST00000559205 NESP48681 1621 aa24.66■■□□□ 1.54
IDH3A-213ENST00000559205 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
IDH3A-213ENST00000559205 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
IDH3A-213ENST00000559205 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
IDH3A-213ENST00000559205 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
IDH3A-213ENST00000559205 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
IDH3A-213ENST00000559205 BAZ1AQ9NRL2 1556 aaPredicted RBP24.34■■□□□ 1.49
IDH3A-213ENST00000559205 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
IDH3A-213ENST00000559205 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
IDH3A-213ENST00000559205 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
IDH3A-213ENST00000559205 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
IDH3A-213ENST00000559205 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
IDH3A-213ENST00000559205 WIZO95785 1651 aa24.02■■□□□ 1.44
IDH3A-213ENST00000559205 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
IDH3A-213ENST00000559205 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
IDH3A-213ENST00000559205 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
IDH3A-213ENST00000559205 WDR62O43379 1518 aa23.9■■□□□ 1.42
IDH3A-213ENST00000559205 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
IDH3A-213ENST00000559205 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
IDH3A-213ENST00000559205 CFTRP13569 1480 aa23.68■■□□□ 1.38
IDH3A-213ENST00000559205 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
IDH3A-213ENST00000559205 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
IDH3A-213ENST00000559205 OSCARQ8IYS5 282 aa23.6■■□□□ 1.37
IDH3A-213ENST00000559205 TOP2AP11388 1531 aaKnown RBP23.55■■□□□ 1.36
IDH3A-213ENST00000559205 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
IDH3A-213ENST00000559205 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
IDH3A-213ENST00000559205 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
IDH3A-213ENST00000559205 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
IDH3A-213ENST00000559205 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
IDH3A-213ENST00000559205 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
IDH3A-213ENST00000559205 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
IDH3A-213ENST00000559205 IFT140Q96RY7 1462 aa23.29■■□□□ 1.32
IDH3A-213ENST00000559205 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
IDH3A-213ENST00000559205 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
IDH3A-213ENST00000559205 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.32e-6■■■■■ 26.9
IDH3A-213ENST00000559205 CHD1O14646 1710 aa23.17■■□□□ 1.3
IDH3A-213ENST00000559205 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
IDH3A-213ENST00000559205 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
IDH3A-213ENST00000559205 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
IDH3A-213ENST00000559205 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
IDH3A-213ENST00000559205 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
IDH3A-213ENST00000559205 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
IDH3A-213ENST00000559205 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
IDH3A-213ENST00000559205 FBLN2P98095 1184 aa23.03■■□□□ 1.28
IDH3A-213ENST00000559205 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
IDH3A-213ENST00000559205 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
IDH3A-213ENST00000559205 SOGA1O94964 1423 aa22.91■■□□□ 1.26
IDH3A-213ENST00000559205 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
IDH3A-213ENST00000559205 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
IDH3A-213ENST00000559205 CUX1P39880 1505 aa22.83■■□□□ 1.25
IDH3A-213ENST00000559205 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.25
IDH3A-213ENST00000559205 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
IDH3A-213ENST00000559205 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
IDH3A-213ENST00000559205 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
IDH3A-213ENST00000559205 MAGI1Q96QZ7 1491 aaPredicted RBP22.7■■□□□ 1.22
IDH3A-213ENST00000559205 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
IDH3A-213ENST00000559205 PBRM1Q86U86 1689 aa22.67■■□□□ 1.22
IDH3A-213ENST00000559205 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
IDH3A-213ENST00000559205 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
IDH3A-213ENST00000559205 ERCC6L2Q5T890 1561 aa22.61■■□□□ 1.21
IDH3A-213ENST00000559205 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
IDH3A-213ENST00000559205 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
IDH3A-213ENST00000559205 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
IDH3A-213ENST00000559205 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
IDH3A-213ENST00000559205 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
IDH3A-213ENST00000559205 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
IDH3A-213ENST00000559205 ADAMTS12P58397 1594 aa22.39■■□□□ 1.18
IDH3A-213ENST00000559205 NUP160Q12769 1436 aa22.39■■□□□ 1.17
IDH3A-213ENST00000559205 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
IDH3A-213ENST00000559205 WRNQ14191 1432 aaPredicted RBP eCLIP22.33■■□□□ 1.17
IDH3A-213ENST00000559205 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
IDH3A-213ENST00000559205 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
IDH3A-213ENST00000559205 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
IDH3A-213ENST00000559205 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
IDH3A-213ENST00000559205 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
IDH3A-213ENST00000559205 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
IDH3A-213ENST00000559205 JPH4Q96JJ6 628 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 248.4 ms