RNA–Protein interactions for RNA: ENST00000559195.5

TNFAIP2-203, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-203ENST00000559195 NISCHQ9Y2I1 1504 aa47.46■■■■■ 5.19
TNFAIP2-203ENST00000559195 ABCC9O60706 1549 aa42.64■■■■■ 4.42
TNFAIP2-203ENST00000559195 CCDC180Q9P1Z9 1646 aa42.62■■■■■ 4.41
TNFAIP2-203ENST00000559195 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.09
TNFAIP2-203ENST00000559195 NACADO15069 1562 aa40.29■■■■■ 4.04
TNFAIP2-203ENST00000559195 DNAJC5BQ9UF47 199 aa40.06■■■■■ 4
TNFAIP2-203ENST00000559195 DCAF8L2P0C7V8 631 aa40.03■■■■■ 4
TNFAIP2-203ENST00000559195 MYO15BQ96JP2 1530 aa39.72■■■■□ 3.95
TNFAIP2-203ENST00000559195 UNC13AQ9UPW8 1703 aa39.72■■■■□ 3.95
TNFAIP2-203ENST00000559195 PABPN1Q86U42 306 aaKnown RBP eCLIP39.68■■■■□ 3.94
TNFAIP2-203ENST00000559195 BICRAQ9NZM4 1560 aa39.43■■■■□ 3.9
TNFAIP2-203ENST00000559195 ZCCHC6Q5VYS8 1495 aaKnown RBP39.33■■■■□ 3.89
TNFAIP2-203ENST00000559195 DCAF1Q9Y4B6 1507 aa39.2■■■■□ 3.87
TNFAIP2-203ENST00000559195 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
TNFAIP2-203ENST00000559195 SCRIBQ14160 1630 aa38.82■■■■□ 3.81
TNFAIP2-203ENST00000559195 CC2D2AQ9P2K1 1620 aa38.54■■■■□ 3.76
TNFAIP2-203ENST00000559195 EIF4G1Q04637 1599 aaKnown RBP38.44■■■■□ 3.74
TNFAIP2-203ENST00000559195 CECR2Q9BXF3 1484 aa38.41■■■■□ 3.74
TNFAIP2-203ENST00000559195 NCAPD3P42695 1498 aa37.2■■■■□ 3.54
TNFAIP2-203ENST00000559195 ATAD2BQ9ULI0 1458 aa37.08■■■■□ 3.53
TNFAIP2-203ENST00000559195 SMARCA4P51532 1647 aa37.04■■■■□ 3.52
TNFAIP2-203ENST00000559195 SMARCA2P51531 1590 aa36.96■■■■□ 3.51
TNFAIP2-203ENST00000559195 HMGXB3Q12766 1538 aa36.92■■■■□ 3.5
TNFAIP2-203ENST00000559195 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
TNFAIP2-203ENST00000559195 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
TNFAIP2-203ENST00000559195 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
TNFAIP2-203ENST00000559195 CUX2O14529 1486 aa36.77■■■■□ 3.48
TNFAIP2-203ENST00000559195 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
TNFAIP2-203ENST00000559195 PEG3Q9GZU2 1588 aa36.69■■■■□ 3.46
TNFAIP2-203ENST00000559195 NESP48681 1621 aa36.63■■■■□ 3.45
TNFAIP2-203ENST00000559195 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.45
TNFAIP2-203ENST00000559195 LAMC3Q9Y6N6 1575 aa36.37■■■■□ 3.41
TNFAIP2-203ENST00000559195 THOC2Q8NI27 1593 aaKnown RBP36.29■■■■□ 3.4
TNFAIP2-203ENST00000559195 KIF21AQ7Z4S6 1674 aa36.19■■■■□ 3.38
TNFAIP2-203ENST00000559195 WIZO95785 1651 aa36.16■■■■□ 3.38
TNFAIP2-203ENST00000559195 PDS5BQ9NTI5 1447 aa36.14■■■■□ 3.38
TNFAIP2-203ENST00000559195 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
TNFAIP2-203ENST00000559195 MRC2Q9UBG0 1479 aa35.84■■■■□ 3.33
TNFAIP2-203ENST00000559195 RSF1Q96T23 1441 aaPredicted RBP35.79■■■■□ 3.32
TNFAIP2-203ENST00000559195 WDR62O43379 1518 aa35.77■■■■□ 3.32
TNFAIP2-203ENST00000559195 CEP164Q9UPV0 1460 aa35.68■■■■□ 3.3
TNFAIP2-203ENST00000559195 TOP2AP11388 1531 aaKnown RBP35.67■■■■□ 3.3
TNFAIP2-203ENST00000559195 FANCD2Q9BXW9 1451 aa35.65■■■■□ 3.3
TNFAIP2-203ENST00000559195 CFTRP13569 1480 aa35.64■■■■□ 3.3
TNFAIP2-203ENST00000559195 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
TNFAIP2-203ENST00000559195 PRDM2Q13029 1718 aa35.33■■■■□ 3.25
TNFAIP2-203ENST00000559195 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
TNFAIP2-203ENST00000559195 TRIM41Q8WV44 630 aa35.14■■■■□ 3.22
TNFAIP2-203ENST00000559195 OSCARQ8IYS5 282 aa35.06■■■■□ 3.2
TNFAIP2-203ENST00000559195 TOPBP1Q92547 1522 aa34.98■■■■□ 3.19
TNFAIP2-203ENST00000559195 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
TNFAIP2-203ENST00000559195 ZNF608Q9ULD9 1512 aaPredicted RBP34.94■■■■□ 3.18
TNFAIP2-203ENST00000559195 ABCC8Q09428 1581 aa34.88■■■■□ 3.17
TNFAIP2-203ENST00000559195 DNMBPQ6XZF7 1577 aa34.85■■■■□ 3.17
TNFAIP2-203ENST00000559195 EIF4G3O43432 1585 aaKnown RBP34.75■■■■□ 3.15
TNFAIP2-203ENST00000559195 TARBP1Q13395 1621 aaKnown RBP34.69■■■■□ 3.14
TNFAIP2-203ENST00000559195 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
TNFAIP2-203ENST00000559195 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
TNFAIP2-203ENST00000559195 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
TNFAIP2-203ENST00000559195 AQRO60306 1485 aaKnown RBP eCLIP34.61■■■■□ 3.132e-8■■□□□ 14.3
TNFAIP2-203ENST00000559195 POLA1P09884 1462 aaPredicted RBP34.61■■■■□ 3.13
TNFAIP2-203ENST00000559195 ARHGEF11O15085 1522 aa34.53■■■■□ 3.12
TNFAIP2-203ENST00000559195 CHD1O14646 1710 aa34.52■■■■□ 3.12
TNFAIP2-203ENST00000559195 RAD54L2Q9Y4B4 1467 aa34.49■■■■□ 3.11
TNFAIP2-203ENST00000559195 SOGA1O94964 1423 aa34.45■■■■□ 3.11
TNFAIP2-203ENST00000559195 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
TNFAIP2-203ENST00000559195 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
TNFAIP2-203ENST00000559195 CUX1P39880 1505 aa34.37■■■■□ 3.09
TNFAIP2-203ENST00000559195 FBLN2P98095 1184 aa34.35■■■■□ 3.09
TNFAIP2-203ENST00000559195 WDR97A6NE52 1622 aa34.32■■■■□ 3.08
TNFAIP2-203ENST00000559195 SNAPC4Q5SXM2 1469 aa34.26■■■■□ 3.07
TNFAIP2-203ENST00000559195 CYB5RLQ6IPT4 315 aa34.25■■■■□ 3.07
TNFAIP2-203ENST00000559195 ARAP1Q96P48 1450 aa34.2■■■■□ 3.06
TNFAIP2-203ENST00000559195 MAGI1Q96QZ7 1491 aaPredicted RBP34.16■■■■□ 3.06
TNFAIP2-203ENST00000559195 GRIN2BQ13224 1484 aa34.15■■■■□ 3.06
TNFAIP2-203ENST00000559195 SUPT5HO00267 1087 aaKnown RBP34.14■■■■□ 3.06
TNFAIP2-203ENST00000559195 CLASP1Q7Z460 1538 aa34.11■■■■□ 3.05
TNFAIP2-203ENST00000559195 CHMP7Q8WUX9 453 aaPredicted RBP34.1■■■■□ 3.05
TNFAIP2-203ENST00000559195 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
TNFAIP2-203ENST00000559195 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
TNFAIP2-203ENST00000559195 SYNJ2O15056 1496 aa34.05■■■■□ 3.04
TNFAIP2-203ENST00000559195 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
TNFAIP2-203ENST00000559195 ABCA10Q8WWZ4 1543 aa34■■■■□ 3.03
TNFAIP2-203ENST00000559195 ABCA5Q8WWZ7 1642 aa33.97■■■■□ 3.03
TNFAIP2-203ENST00000559195 TRHP20396 242 aaPredicted RBP33.86■■■■□ 3.01
TNFAIP2-203ENST00000559195 WRNQ14191 1432 aaPredicted RBP eCLIP33.83■■■■□ 3.01
TNFAIP2-203ENST00000559195 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3.01
TNFAIP2-203ENST00000559195 TOP2BQ02880 1626 aa33.8■■■■□ 3
TNFAIP2-203ENST00000559195 GRIN2AQ12879 1464 aa33.72■■■□□ 2.99
TNFAIP2-203ENST00000559195 ADAMTS12P58397 1594 aa33.71■■■□□ 2.99
TNFAIP2-203ENST00000559195 CEP170Q5SW79 1584 aa33.62■■■□□ 2.97
TNFAIP2-203ENST00000559195 NUP160Q12769 1436 aa33.62■■■□□ 2.97
TNFAIP2-203ENST00000559195 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
TNFAIP2-203ENST00000559195 ERCC6L2Q5T890 1561 aa33.59■■■□□ 2.97
TNFAIP2-203ENST00000559195 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
TNFAIP2-203ENST00000559195 SHROOM2Q13796 1616 aa33.5■■■□□ 2.95
TNFAIP2-203ENST00000559195 PRG4Q92954 1404 aaPredicted RBP33.28■■■□□ 2.92
TNFAIP2-203ENST00000559195 JPH4Q96JJ6 628 aa33.25■■■□□ 2.91
TNFAIP2-203ENST00000559195 RUSC2Q8N2Y8 1516 aa33.24■■■□□ 2.91
TNFAIP2-203ENST00000559195 IGF1RP08069 1367 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms