RNA–Protein interactions for RNA: ENST00000559160.1

RNF111-205, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-205ENST00000559160 NISCHQ9Y2I1 1504 aa54.98■■■■■ 6.39
RNF111-205ENST00000559160 CCDC180Q9P1Z9 1646 aa48.61■■■■■ 5.37
RNF111-205ENST00000559160 ABCC9O60706 1549 aa47.33■■■■■ 5.17
RNF111-205ENST00000559160 DCAF8L2P0C7V8 631 aa45.87■■■■■ 4.93
RNF111-205ENST00000559160 ZCCHC6Q5VYS8 1495 aaKnown RBP45.85■■■■■ 4.93
RNF111-205ENST00000559160 NACADO15069 1562 aa45.67■■■■■ 4.9
RNF111-205ENST00000559160 RB1CC1Q8TDY2 1594 aa45.62■■■■■ 4.89
RNF111-205ENST00000559160 MYO15BQ96JP2 1530 aa45.53■■■■■ 4.88
RNF111-205ENST00000559160 DCAF1Q9Y4B6 1507 aa45.48■■■■■ 4.87
RNF111-205ENST00000559160 UNC13AQ9UPW8 1703 aa44.54■■■■■ 4.72
RNF111-205ENST00000559160 SCRIBQ14160 1630 aa44.43■■■■■ 4.7
RNF111-205ENST00000559160 PABPN1Q86U42 306 aaKnown RBP eCLIP44.36■■■■■ 4.69
RNF111-205ENST00000559160 BICRAQ9NZM4 1560 aa44.27■■■■■ 4.68
RNF111-205ENST00000559160 SHROOM4Q9ULL8 1493 aa43.78■■■■■ 4.6
RNF111-205ENST00000559160 DNAJC5BQ9UF47 199 aa43.22■■■■■ 4.51
RNF111-205ENST00000559160 EIF4G1Q04637 1599 aaKnown RBP43.05■■■■■ 4.48
RNF111-205ENST00000559160 CECR2Q9BXF3 1484 aa42.83■■■■■ 4.45
RNF111-205ENST00000559160 CC2D2AQ9P2K1 1620 aa42.79■■■■■ 4.44
RNF111-205ENST00000559160 BAZ1AQ9NRL2 1556 aaPredicted RBP42.55■■■■■ 4.4
RNF111-205ENST00000559160 SMARCA4P51532 1647 aa42.53■■■■■ 4.4
RNF111-205ENST00000559160 MROH2BQ7Z745 1585 aa42.39■■■■■ 4.38
RNF111-205ENST00000559160 ATAD2BQ9ULI0 1458 aa42.28■■■■■ 4.36
RNF111-205ENST00000559160 NCAPD3P42695 1498 aa42.2■■■■■ 4.35
RNF111-205ENST00000559160 SMARCA2P51531 1590 aa42.18■■■■■ 4.34
RNF111-205ENST00000559160 PEG3Q9GZU2 1588 aa42.12■■■■■ 4.33
RNF111-205ENST00000559160 RSF1Q96T23 1441 aaPredicted RBP42.07■■■■■ 4.33
RNF111-205ENST00000559160 HMGXB3Q12766 1538 aa41.95■■■■■ 4.31
RNF111-205ENST00000559160 WIZO95785 1651 aa41.91■■■■■ 4.3
RNF111-205ENST00000559160 BAZ1BQ9UIG0 1483 aaKnown RBP41.91■■■■■ 4.3
RNF111-205ENST00000559160 TOP2AP11388 1531 aaKnown RBP41.49■■■■■ 4.23
RNF111-205ENST00000559160 SUPT5HO00267 1087 aaKnown RBP41.32■■■■■ 4.21
RNF111-205ENST00000559160 NESP48681 1621 aa41.07■■■■■ 4.17
RNF111-205ENST00000559160 CCDC88BA6NC98 1476 aa41.06■■■■■ 4.16
RNF111-205ENST00000559160 CADPSQ9ULU8 1353 aa41■■■■■ 4.15
RNF111-205ENST00000559160 LAMC3Q9Y6N6 1575 aa40.95■■■■■ 4.15
RNF111-205ENST00000559160 CFTRP13569 1480 aa40.82■■■■■ 4.12
RNF111-205ENST00000559160 ERCC6Q03468 1493 aa40.72■■■■■ 4.11
RNF111-205ENST00000559160 PDS5BQ9NTI5 1447 aa40.72■■■■■ 4.11
RNF111-205ENST00000559160 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
RNF111-205ENST00000559160 KIF21AQ7Z4S6 1674 aa40.5■■■■■ 4.07
RNF111-205ENST00000559160 CEP164Q9UPV0 1460 aa40.39■■■■■ 4.06
RNF111-205ENST00000559160 PRDM2Q13029 1718 aa40.37■■■■■ 4.05
RNF111-205ENST00000559160 THOC2Q8NI27 1593 aaKnown RBP40.29■■■■■ 4.04
RNF111-205ENST00000559160 MRC2Q9UBG0 1479 aa40.26■■■■■ 4.03
RNF111-205ENST00000559160 CUX2O14529 1486 aa40.15■■■■■ 4.02
RNF111-205ENST00000559160 WDR62O43379 1518 aa40.1■■■■■ 4.01
RNF111-205ENST00000559160 URB2Q14146 1524 aaKnown RBP40.09■■■■■ 4.01
RNF111-205ENST00000559160 ABCC8Q09428 1581 aa39.89■■■■□ 3.98
RNF111-205ENST00000559160 TOPBP1Q92547 1522 aa39.89■■■■□ 3.98
RNF111-205ENST00000559160 DNMBPQ6XZF7 1577 aa39.84■■■■□ 3.97
RNF111-205ENST00000559160 CUX1P39880 1505 aa39.74■■■■□ 3.95
RNF111-205ENST00000559160 WRNQ14191 1432 aaPredicted RBP eCLIP39.62■■■■□ 3.93
RNF111-205ENST00000559160 POLA1P09884 1462 aaPredicted RBP39.57■■■■□ 3.93
RNF111-205ENST00000559160 IFT140Q96RY7 1462 aa39.55■■■■□ 3.92
RNF111-205ENST00000559160 FGD5Q6ZNL6 1462 aa39.54■■■■□ 3.92
RNF111-205ENST00000559160 SYNJ1O43426 1573 aa39.48■■■■□ 3.91
RNF111-205ENST00000559160 SOGA1O94964 1423 aa39.46■■■■□ 3.91
RNF111-205ENST00000559160 TOP2BQ02880 1626 aa39.45■■■■□ 3.91
RNF111-205ENST00000559160 RAD54L2Q9Y4B4 1467 aa39.44■■■■□ 3.9
RNF111-205ENST00000559160 BIVM-ERCC5R4GMW8 1640 aa39.42■■■■□ 3.9
RNF111-205ENST00000559160 TARBP1Q13395 1621 aaKnown RBP39.4■■■■□ 3.9
RNF111-205ENST00000559160 ZNF608Q9ULD9 1512 aaPredicted RBP39.37■■■■□ 3.89
RNF111-205ENST00000559160 TDRD9Q8NDG6 1382 aaKnown RBP39.21■■■■□ 3.87
RNF111-205ENST00000559160 AQRO60306 1485 aaKnown RBP eCLIP39.21■■■■□ 3.87
RNF111-205ENST00000559160 ABCA10Q8WWZ4 1543 aa39.17■■■■□ 3.86
RNF111-205ENST00000559160 EIF4G3O43432 1585 aaKnown RBP39.14■■■■□ 3.86
RNF111-205ENST00000559160 WDR97A6NE52 1622 aa39.11■■■■□ 3.85
RNF111-205ENST00000559160 TRIM41Q8WV44 630 aa38.99■■■■□ 3.83
RNF111-205ENST00000559160 GAPVD1Q14C86 1478 aa38.98■■■■□ 3.83
RNF111-205ENST00000559160 ABCA5Q8WWZ7 1642 aa38.93■■■■□ 3.82
RNF111-205ENST00000559160 GRIN2BQ13224 1484 aa38.92■■■■□ 3.82
RNF111-205ENST00000559160 SNAPC4Q5SXM2 1469 aa38.81■■■■□ 3.8
RNF111-205ENST00000559160 CHIC1Q5VXU3 224 aa38.8■■■■□ 3.8
RNF111-205ENST00000559160 KIF27Q86VH2 1401 aa38.77■■■■□ 3.8
RNF111-205ENST00000559160 PBRM1Q86U86 1689 aa38.77■■■■□ 3.8
RNF111-205ENST00000559160 MAGI1Q96QZ7 1491 aaPredicted RBP38.75■■■■□ 3.79
RNF111-205ENST00000559160 ERICH3Q5RHP9 1530 aa38.68■■■■□ 3.78
RNF111-205ENST00000559160 FBLN2P98095 1184 aa38.68■■■■□ 3.78
RNF111-205ENST00000559160 OSCARQ8IYS5 282 aa38.65■■■■□ 3.78
RNF111-205ENST00000559160 IGF1RP08069 1367 aa38.63■■■■□ 3.77
RNF111-205ENST00000559160 CHMP7Q8WUX9 453 aaPredicted RBP38.63■■■■□ 3.77
RNF111-205ENST00000559160 SYNJ2O15056 1496 aa38.61■■■■□ 3.77
RNF111-205ENST00000559160 DNAJC5Q9H3Z4 198 aa38.6■■■■□ 3.77
RNF111-205ENST00000559160 RUSC2Q8N2Y8 1516 aa38.58■■■■□ 3.77
RNF111-205ENST00000559160 FHAD1B1AJZ9 1412 aa38.55■■■■□ 3.76
RNF111-205ENST00000559160 CHD1O14646 1710 aa38.55■■■■□ 3.76
RNF111-205ENST00000559160 ADAMTS12P58397 1594 aa38.53■■■■□ 3.76
RNF111-205ENST00000559160 GRIN2AQ12879 1464 aa38.41■■■■□ 3.74
RNF111-205ENST00000559160 CARMIL1Q5VZK9 1371 aa38.38■■■■□ 3.73
RNF111-205ENST00000559160 CUL7Q14999 1698 aa38.35■■■■□ 3.73
RNF111-205ENST00000559160 NUP160Q12769 1436 aa38.25■■■■□ 3.71
RNF111-205ENST00000559160 EEA1Q15075 1411 aa38.25■■■■□ 3.71
RNF111-205ENST00000559160 CSRNP3Q8WYN3 585 aa38.24■■■■□ 3.71
RNF111-205ENST00000559160 CLASP1Q7Z460 1538 aa38.2■■■■□ 3.71
RNF111-205ENST00000559160 FAM9AQ8IZU1 332 aaPredicted RBP38.19■■■■□ 3.7
RNF111-205ENST00000559160 CEP170Q5SW79 1584 aa38.19■■■■□ 3.7
RNF111-205ENST00000559160 RAPGEF2Q9Y4G8 1499 aa38.16■■■■□ 3.7
RNF111-205ENST00000559160 PRXQ9BXM0 1461 aa38.13■■■■□ 3.69
RNF111-205ENST00000559160 KIAA0586Q9BVV6 1533 aa37.97■■■■□ 3.67
RNF111-205ENST00000559160 ARHGEF11O15085 1522 aa37.95■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms