RNA–Protein interactions for RNA: ENST00000559065.1

AC048382.4-201, humanhuman

TSL 4 BASIC

Gene AC048382.4, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048382.4-201ENST00000559065 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
AC048382.4-201ENST00000559065 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
AC048382.4-201ENST00000559065 ABCC9O60706 1549 aa27.32■■□□□ 1.96
AC048382.4-201ENST00000559065 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
AC048382.4-201ENST00000559065 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
AC048382.4-201ENST00000559065 NACADO15069 1562 aa26.16■■□□□ 1.78
AC048382.4-201ENST00000559065 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
AC048382.4-201ENST00000559065 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
AC048382.4-201ENST00000559065 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
AC048382.4-201ENST00000559065 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
AC048382.4-201ENST00000559065 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
AC048382.4-201ENST00000559065 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
AC048382.4-201ENST00000559065 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
AC048382.4-201ENST00000559065 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
AC048382.4-201ENST00000559065 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
AC048382.4-201ENST00000559065 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
AC048382.4-201ENST00000559065 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
AC048382.4-201ENST00000559065 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
AC048382.4-201ENST00000559065 SMARCA4P51532 1647 aa24.18■■□□□ 1.46
AC048382.4-201ENST00000559065 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
AC048382.4-201ENST00000559065 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
AC048382.4-201ENST00000559065 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
AC048382.4-201ENST00000559065 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
AC048382.4-201ENST00000559065 HMGXB3Q12766 1538 aa24■■□□□ 1.43
AC048382.4-201ENST00000559065 BAZ1BQ9UIG0 1483 aaKnown RBP23.95■■□□□ 1.42
AC048382.4-201ENST00000559065 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
AC048382.4-201ENST00000559065 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
AC048382.4-201ENST00000559065 WIZO95785 1651 aa23.67■■□□□ 1.38
AC048382.4-201ENST00000559065 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
AC048382.4-201ENST00000559065 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
AC048382.4-201ENST00000559065 NESP48681 1621 aa23.55■■□□□ 1.36
AC048382.4-201ENST00000559065 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
AC048382.4-201ENST00000559065 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
AC048382.4-201ENST00000559065 PDS5BQ9NTI5 1447 aa23.43■■□□□ 1.34
AC048382.4-201ENST00000559065 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
AC048382.4-201ENST00000559065 CUX2O14529 1486 aa23.43■■□□□ 1.34
AC048382.4-201ENST00000559065 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
AC048382.4-201ENST00000559065 THOC2Q8NI27 1593 aaKnown RBP23.24■■□□□ 1.31
AC048382.4-201ENST00000559065 CFTRP13569 1480 aa23.24■■□□□ 1.31
AC048382.4-201ENST00000559065 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
AC048382.4-201ENST00000559065 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
AC048382.4-201ENST00000559065 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
AC048382.4-201ENST00000559065 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
AC048382.4-201ENST00000559065 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
AC048382.4-201ENST00000559065 WDR62O43379 1518 aa23.06■■□□□ 1.28
AC048382.4-201ENST00000559065 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
AC048382.4-201ENST00000559065 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
AC048382.4-201ENST00000559065 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
AC048382.4-201ENST00000559065 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
AC048382.4-201ENST00000559065 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
AC048382.4-201ENST00000559065 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
AC048382.4-201ENST00000559065 IFT140Q96RY7 1462 aa22.7■■□□□ 1.22
AC048382.4-201ENST00000559065 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
AC048382.4-201ENST00000559065 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
AC048382.4-201ENST00000559065 CUX1P39880 1505 aa22.49■■□□□ 1.19
AC048382.4-201ENST00000559065 SOGA1O94964 1423 aa22.48■■□□□ 1.19
AC048382.4-201ENST00000559065 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
AC048382.4-201ENST00000559065 TARBP1Q13395 1621 aaKnown RBP22.47■■□□□ 1.19
AC048382.4-201ENST00000559065 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
AC048382.4-201ENST00000559065 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
AC048382.4-201ENST00000559065 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
AC048382.4-201ENST00000559065 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
AC048382.4-201ENST00000559065 WDR97A6NE52 1622 aa22.37■■□□□ 1.17
AC048382.4-201ENST00000559065 TDRD9Q8NDG6 1382 aaKnown RBP22.36■■□□□ 1.17
AC048382.4-201ENST00000559065 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
AC048382.4-201ENST00000559065 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
AC048382.4-201ENST00000559065 FBLN2P98095 1184 aa22.27■■□□□ 1.16
AC048382.4-201ENST00000559065 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
AC048382.4-201ENST00000559065 BIVM-ERCC5R4GMW8 1640 aa22.25■■□□□ 1.15
AC048382.4-201ENST00000559065 GRIN2BQ13224 1484 aa22.25■■□□□ 1.15
AC048382.4-201ENST00000559065 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
AC048382.4-201ENST00000559065 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
AC048382.4-201ENST00000559065 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
AC048382.4-201ENST00000559065 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
AC048382.4-201ENST00000559065 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
AC048382.4-201ENST00000559065 CHMP7Q8WUX9 453 aaPredicted RBP22.18■■□□□ 1.14
AC048382.4-201ENST00000559065 CHD1O14646 1710 aa22.17■■□□□ 1.14
AC048382.4-201ENST00000559065 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
AC048382.4-201ENST00000559065 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
AC048382.4-201ENST00000559065 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
AC048382.4-201ENST00000559065 RIMBP3CA6NJZ7 1639 aa22.05■■□□□ 1.12
AC048382.4-201ENST00000559065 RIMBP3BA6NNM3 1639 aa22.05■■□□□ 1.12
AC048382.4-201ENST00000559065 RIMBP3Q9UFD9 1639 aa22.05■■□□□ 1.12
AC048382.4-201ENST00000559065 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
AC048382.4-201ENST00000559065 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
AC048382.4-201ENST00000559065 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
AC048382.4-201ENST00000559065 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
AC048382.4-201ENST00000559065 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
AC048382.4-201ENST00000559065 GRIN2AQ12879 1464 aa21.95■■□□□ 1.1
AC048382.4-201ENST00000559065 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
AC048382.4-201ENST00000559065 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
AC048382.4-201ENST00000559065 NUP160Q12769 1436 aa21.84■■□□□ 1.09
AC048382.4-201ENST00000559065 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
AC048382.4-201ENST00000559065 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
AC048382.4-201ENST00000559065 IGF1RP08069 1367 aa21.79■■□□□ 1.08
AC048382.4-201ENST00000559065 CUL7Q14999 1698 aa21.77■■□□□ 1.08
AC048382.4-201ENST00000559065 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
AC048382.4-201ENST00000559065 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
AC048382.4-201ENST00000559065 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
AC048382.4-201ENST00000559065 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms