RNA–Protein interactions for RNA: ENST00000558860.2

AC024337.1-201, humanhuman

TSL 4 BASIC

Gene AC024337.1, Length 1,562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC024337.1-201ENST00000558860 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
AC024337.1-201ENST00000558860 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.71
AC024337.1-201ENST00000558860 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
AC024337.1-201ENST00000558860 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
AC024337.1-201ENST00000558860 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
AC024337.1-201ENST00000558860 FOXD1Q16676 465 aa15.84■□□□□ 0.13
AC024337.1-201ENST00000558860 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
AC024337.1-201ENST00000558860 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.02
AC024337.1-201ENST00000558860 ADRA2BP18089 450 aa15.16■□□□□ 0.02
AC024337.1-201ENST00000558860 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
AC024337.1-201ENST00000558860 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
AC024337.1-201ENST00000558860 SHROOM4Q9ULL8 1493 aa15.05■□□□□ 0
AC024337.1-201ENST00000558860 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
AC024337.1-201ENST00000558860 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
AC024337.1-201ENST00000558860 DCAF1Q9Y4B6 1507 aa14.69□□□□□ -0.06
AC024337.1-201ENST00000558860 MSH5O43196 834 aa14.65□□□□□ -0.06
AC024337.1-201ENST00000558860 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
AC024337.1-201ENST00000558860 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
AC024337.1-201ENST00000558860 ABCC9O60706 1549 aa14.22□□□□□ -0.13
AC024337.1-201ENST00000558860 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
AC024337.1-201ENST00000558860 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
AC024337.1-201ENST00000558860 NACADO15069 1562 aa14.06□□□□□ -0.16
AC024337.1-201ENST00000558860 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
AC024337.1-201ENST00000558860 HRCP23327 699 aa13.94□□□□□ -0.18
AC024337.1-201ENST00000558860 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
AC024337.1-201ENST00000558860 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
AC024337.1-201ENST00000558860 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
AC024337.1-201ENST00000558860 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
AC024337.1-201ENST00000558860 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
AC024337.1-201ENST00000558860 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
AC024337.1-201ENST00000558860 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
AC024337.1-201ENST00000558860 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
AC024337.1-201ENST00000558860 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.22
AC024337.1-201ENST00000558860 WIZO95785 1651 aa13.7□□□□□ -0.22
AC024337.1-201ENST00000558860 BAZ1AQ9NRL2 1556 aaPredicted RBP13.7□□□□□ -0.22
AC024337.1-201ENST00000558860 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
AC024337.1-201ENST00000558860 DMRT2Q9Y5R5 561 aa13.6□□□□□ -0.23
AC024337.1-201ENST00000558860 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.23
AC024337.1-201ENST00000558860 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
AC024337.1-201ENST00000558860 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
AC024337.1-201ENST00000558860 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
AC024337.1-201ENST00000558860 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
AC024337.1-201ENST00000558860 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
AC024337.1-201ENST00000558860 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
AC024337.1-201ENST00000558860 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
AC024337.1-201ENST00000558860 KCNA4P22459 653 aa13.49□□□□□ -0.25
AC024337.1-201ENST00000558860 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
AC024337.1-201ENST00000558860 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
AC024337.1-201ENST00000558860 SMARCA2P51531 1590 aa13.47□□□□□ -0.25
AC024337.1-201ENST00000558860 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
AC024337.1-201ENST00000558860 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
AC024337.1-201ENST00000558860 ABCC8Q09428 1581 aa13.38□□□□□ -0.27
AC024337.1-201ENST00000558860 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
AC024337.1-201ENST00000558860 EEA1Q15075 1411 aa13.33□□□□□ -0.27
AC024337.1-201ENST00000558860 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
AC024337.1-201ENST00000558860 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
AC024337.1-201ENST00000558860 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
AC024337.1-201ENST00000558860 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.29
AC024337.1-201ENST00000558860 TNIKQ9UKE5 1360 aa13.26□□□□□ -0.29
AC024337.1-201ENST00000558860 SOGA1O94964 1423 aa13.26□□□□□ -0.29
AC024337.1-201ENST00000558860 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
AC024337.1-201ENST00000558860 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
AC024337.1-201ENST00000558860 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
AC024337.1-201ENST00000558860 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
AC024337.1-201ENST00000558860 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
AC024337.1-201ENST00000558860 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
AC024337.1-201ENST00000558860 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
AC024337.1-201ENST00000558860 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
AC024337.1-201ENST00000558860 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
AC024337.1-201ENST00000558860 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
AC024337.1-201ENST00000558860 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
AC024337.1-201ENST00000558860 KIF21BO75037 1637 aa13.11□□□□□ -0.31
AC024337.1-201ENST00000558860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
AC024337.1-201ENST00000558860 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
AC024337.1-201ENST00000558860 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
AC024337.1-201ENST00000558860 CLIP1P30622 1438 aa13.02□□□□□ -0.33
AC024337.1-201ENST00000558860 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
AC024337.1-201ENST00000558860 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
AC024337.1-201ENST00000558860 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
AC024337.1-201ENST00000558860 BIVM-ERCC5R4GMW8 1640 aa12.98□□□□□ -0.33
AC024337.1-201ENST00000558860 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
AC024337.1-201ENST00000558860 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.33
AC024337.1-201ENST00000558860 APLP2Q06481 763 aa12.92□□□□□ -0.34
AC024337.1-201ENST00000558860 DNAJC5BQ9UF47 199 aa12.92□□□□□ -0.34
AC024337.1-201ENST00000558860 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
AC024337.1-201ENST00000558860 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
AC024337.1-201ENST00000558860 CUX1P39880 1505 aa12.87□□□□□ -0.35
AC024337.1-201ENST00000558860 CFTRP13569 1480 aa12.86□□□□□ -0.35
AC024337.1-201ENST00000558860 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
AC024337.1-201ENST00000558860 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
AC024337.1-201ENST00000558860 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
AC024337.1-201ENST00000558860 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
AC024337.1-201ENST00000558860 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
AC024337.1-201ENST00000558860 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
AC024337.1-201ENST00000558860 ZNF316A6NFI3 1004 aaPredicted RBP12.77□□□□□ -0.36
AC024337.1-201ENST00000558860 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
AC024337.1-201ENST00000558860 CADPSQ9ULU8 1353 aa12.72□□□□□ -0.37
AC024337.1-201ENST00000558860 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
AC024337.1-201ENST00000558860 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
AC024337.1-201ENST00000558860 CUX2O14529 1486 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms