RNA–Protein interactions for RNA: ENST00000558537.5

GATM-208, Transcript of glycine amidinotransferase, humanhuman

TSL 4

Gene GATM, Length 493 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-208ENST00000558537 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
GATM-208ENST00000558537 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.95
GATM-208ENST00000558537 ABCC9O60706 1549 aa26.25■■□□□ 1.79
GATM-208ENST00000558537 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
GATM-208ENST00000558537 NACADO15069 1562 aa25.44■■□□□ 1.66
GATM-208ENST00000558537 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
GATM-208ENST00000558537 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
GATM-208ENST00000558537 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
GATM-208ENST00000558537 MYO15BQ96JP2 1530 aa25.37■■□□□ 1.65
GATM-208ENST00000558537 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
GATM-208ENST00000558537 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
GATM-208ENST00000558537 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
GATM-208ENST00000558537 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
GATM-208ENST00000558537 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
GATM-208ENST00000558537 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
GATM-208ENST00000558537 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
GATM-208ENST00000558537 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
GATM-208ENST00000558537 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
GATM-208ENST00000558537 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
GATM-208ENST00000558537 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
GATM-208ENST00000558537 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
GATM-208ENST00000558537 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
GATM-208ENST00000558537 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
GATM-208ENST00000558537 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
GATM-208ENST00000558537 WIZO95785 1651 aa23.44■■□□□ 1.34
GATM-208ENST00000558537 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
GATM-208ENST00000558537 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
GATM-208ENST00000558537 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
GATM-208ENST00000558537 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.33
GATM-208ENST00000558537 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
GATM-208ENST00000558537 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
GATM-208ENST00000558537 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
GATM-208ENST00000558537 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
GATM-208ENST00000558537 NESP48681 1621 aa22.82■■□□□ 1.24
GATM-208ENST00000558537 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
GATM-208ENST00000558537 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
GATM-208ENST00000558537 CFTRP13569 1480 aa22.7■■□□□ 1.22
GATM-208ENST00000558537 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
GATM-208ENST00000558537 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
GATM-208ENST00000558537 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
GATM-208ENST00000558537 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
GATM-208ENST00000558537 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
GATM-208ENST00000558537 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
GATM-208ENST00000558537 MRC2Q9UBG0 1479 aa22.38■■□□□ 1.17
GATM-208ENST00000558537 WDR62O43379 1518 aa22.33■■□□□ 1.17
GATM-208ENST00000558537 URB2Q14146 1524 aaKnown RBP22.3■■□□□ 1.16
GATM-208ENST00000558537 CUX2O14529 1486 aa22.28■■□□□ 1.16
GATM-208ENST00000558537 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
GATM-208ENST00000558537 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
GATM-208ENST00000558537 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
GATM-208ENST00000558537 CUX1P39880 1505 aa22.16■■□□□ 1.14
GATM-208ENST00000558537 BIVM-ERCC5R4GMW8 1640 aa22.09■■□□□ 1.13
GATM-208ENST00000558537 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
GATM-208ENST00000558537 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
GATM-208ENST00000558537 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
GATM-208ENST00000558537 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
GATM-208ENST00000558537 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
GATM-208ENST00000558537 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
GATM-208ENST00000558537 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
GATM-208ENST00000558537 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
GATM-208ENST00000558537 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
GATM-208ENST00000558537 SOGA1O94964 1423 aa21.9■■□□□ 1.1
GATM-208ENST00000558537 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
GATM-208ENST00000558537 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
GATM-208ENST00000558537 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
GATM-208ENST00000558537 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
GATM-208ENST00000558537 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.078e-6■■■■□ 23.2
GATM-208ENST00000558537 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
GATM-208ENST00000558537 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
GATM-208ENST00000558537 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
GATM-208ENST00000558537 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
GATM-208ENST00000558537 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
GATM-208ENST00000558537 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
GATM-208ENST00000558537 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
GATM-208ENST00000558537 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
GATM-208ENST00000558537 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
GATM-208ENST00000558537 CHD1O14646 1710 aa21.58■■□□□ 1.04
GATM-208ENST00000558537 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
GATM-208ENST00000558537 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
GATM-208ENST00000558537 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
GATM-208ENST00000558537 CUL7Q14999 1698 aa21.48■■□□□ 1.03
GATM-208ENST00000558537 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
GATM-208ENST00000558537 IGF1RP08069 1367 aa21.44■■□□□ 1.02
GATM-208ENST00000558537 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
GATM-208ENST00000558537 FBLN2P98095 1184 aa21.39■■□□□ 1.01
GATM-208ENST00000558537 GRIN2AQ12879 1464 aa21.39■■□□□ 1.01
GATM-208ENST00000558537 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
GATM-208ENST00000558537 EEA1Q15075 1411 aa21.36■■□□□ 1.01
GATM-208ENST00000558537 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
GATM-208ENST00000558537 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1
GATM-208ENST00000558537 CEP170Q5SW79 1584 aa21.3■■□□□ 1
GATM-208ENST00000558537 CLASP1Q7Z460 1538 aa21.28■■□□□ 1
GATM-208ENST00000558537 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
GATM-208ENST00000558537 NUP160Q12769 1436 aa21.26■□□□□ 0.99
GATM-208ENST00000558537 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
GATM-208ENST00000558537 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
GATM-208ENST00000558537 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
GATM-208ENST00000558537 KIF21BO75037 1637 aa21.19■□□□□ 0.98
GATM-208ENST00000558537 DNAJC5Q9H3Z4 198 aa21.19■□□□□ 0.98
GATM-208ENST00000558537 CTTNBP2Q8WZ74 1663 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms