RNA–Protein interactions for RNA: ENST00000558515.1

AC019254.1-202, humanhuman

TSL 3 BASIC

Gene AC019254.1, Length 645 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC019254.1-202ENST00000558515 NISCHQ9Y2I1 1504 aa29.99■■■□□ 2.39
AC019254.1-202ENST00000558515 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
AC019254.1-202ENST00000558515 ABCC9O60706 1549 aa25.68■■□□□ 1.7
AC019254.1-202ENST00000558515 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
AC019254.1-202ENST00000558515 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
AC019254.1-202ENST00000558515 NACADO15069 1562 aa24.83■■□□□ 1.57
AC019254.1-202ENST00000558515 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
AC019254.1-202ENST00000558515 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
AC019254.1-202ENST00000558515 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
AC019254.1-202ENST00000558515 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
AC019254.1-202ENST00000558515 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
AC019254.1-202ENST00000558515 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
AC019254.1-202ENST00000558515 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
AC019254.1-202ENST00000558515 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
AC019254.1-202ENST00000558515 EIF4G1Q04637 1599 aaKnown RBP23.37■■□□□ 1.33
AC019254.1-202ENST00000558515 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
AC019254.1-202ENST00000558515 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
AC019254.1-202ENST00000558515 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
AC019254.1-202ENST00000558515 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
AC019254.1-202ENST00000558515 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
AC019254.1-202ENST00000558515 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
AC019254.1-202ENST00000558515 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
AC019254.1-202ENST00000558515 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
AC019254.1-202ENST00000558515 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
AC019254.1-202ENST00000558515 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
AC019254.1-202ENST00000558515 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
AC019254.1-202ENST00000558515 WIZO95785 1651 aa22.89■■□□□ 1.25
AC019254.1-202ENST00000558515 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
AC019254.1-202ENST00000558515 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
AC019254.1-202ENST00000558515 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
AC019254.1-202ENST00000558515 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
AC019254.1-202ENST00000558515 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
AC019254.1-202ENST00000558515 NESP48681 1621 aa22.31■■□□□ 1.16
AC019254.1-202ENST00000558515 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
AC019254.1-202ENST00000558515 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
AC019254.1-202ENST00000558515 CFTRP13569 1480 aa22.22■■□□□ 1.15
AC019254.1-202ENST00000558515 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
AC019254.1-202ENST00000558515 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
AC019254.1-202ENST00000558515 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
AC019254.1-202ENST00000558515 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
AC019254.1-202ENST00000558515 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
AC019254.1-202ENST00000558515 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
AC019254.1-202ENST00000558515 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
AC019254.1-202ENST00000558515 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
AC019254.1-202ENST00000558515 URB2Q14146 1524 aaKnown RBP21.79■■□□□ 1.08
AC019254.1-202ENST00000558515 WDR62O43379 1518 aa21.76■■□□□ 1.07
AC019254.1-202ENST00000558515 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
AC019254.1-202ENST00000558515 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
AC019254.1-202ENST00000558515 DNMBPQ6XZF7 1577 aa21.7■■□□□ 1.06
AC019254.1-202ENST00000558515 CUX2O14529 1486 aa21.7■■□□□ 1.06
AC019254.1-202ENST00000558515 CUX1P39880 1505 aa21.67■■□□□ 1.06
AC019254.1-202ENST00000558515 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
AC019254.1-202ENST00000558515 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
AC019254.1-202ENST00000558515 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
AC019254.1-202ENST00000558515 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
AC019254.1-202ENST00000558515 POLA1P09884 1462 aaPredicted RBP21.55■■□□□ 1.04
AC019254.1-202ENST00000558515 BIVM-ERCC5R4GMW8 1640 aa21.53■■□□□ 1.04
AC019254.1-202ENST00000558515 SOGA1O94964 1423 aa21.5■■□□□ 1.03
AC019254.1-202ENST00000558515 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
AC019254.1-202ENST00000558515 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
AC019254.1-202ENST00000558515 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
AC019254.1-202ENST00000558515 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
AC019254.1-202ENST00000558515 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
AC019254.1-202ENST00000558515 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
AC019254.1-202ENST00000558515 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
AC019254.1-202ENST00000558515 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
AC019254.1-202ENST00000558515 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
AC019254.1-202ENST00000558515 WDR97A6NE52 1622 aa21.3■■□□□ 1
AC019254.1-202ENST00000558515 EIF4G3O43432 1585 aaKnown RBP21.28■■□□□ 1
AC019254.1-202ENST00000558515 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
AC019254.1-202ENST00000558515 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
AC019254.1-202ENST00000558515 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
AC019254.1-202ENST00000558515 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
AC019254.1-202ENST00000558515 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
AC019254.1-202ENST00000558515 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
AC019254.1-202ENST00000558515 SNAPC4Q5SXM2 1469 aa21.12■□□□□ 0.97
AC019254.1-202ENST00000558515 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
AC019254.1-202ENST00000558515 IGF1RP08069 1367 aa21.08■□□□□ 0.96
AC019254.1-202ENST00000558515 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
AC019254.1-202ENST00000558515 FBLN2P98095 1184 aa21.05■□□□□ 0.96
AC019254.1-202ENST00000558515 FAM9AQ8IZU1 332 aaPredicted RBP21.02■□□□□ 0.96
AC019254.1-202ENST00000558515 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
AC019254.1-202ENST00000558515 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
AC019254.1-202ENST00000558515 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
AC019254.1-202ENST00000558515 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
AC019254.1-202ENST00000558515 EEA1Q15075 1411 aa20.98■□□□□ 0.95
AC019254.1-202ENST00000558515 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
AC019254.1-202ENST00000558515 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
AC019254.1-202ENST00000558515 CUL7Q14999 1698 aa20.94■□□□□ 0.94
AC019254.1-202ENST00000558515 CHD1O14646 1710 aa20.94■□□□□ 0.94
AC019254.1-202ENST00000558515 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
AC019254.1-202ENST00000558515 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
AC019254.1-202ENST00000558515 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
AC019254.1-202ENST00000558515 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
AC019254.1-202ENST00000558515 NUP160Q12769 1436 aa20.79■□□□□ 0.92
AC019254.1-202ENST00000558515 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
AC019254.1-202ENST00000558515 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
AC019254.1-202ENST00000558515 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
AC019254.1-202ENST00000558515 KIF21BO75037 1637 aa20.72■□□□□ 0.91
AC019254.1-202ENST00000558515 DNAJC5Q9H3Z4 198 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms