RNA–Protein interactions for RNA: ENST00000558499.2

AC087477.2-202, humanhuman

TSL 4 BASIC

Gene AC087477.2, Length 4,856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.2-202ENST00000558499 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
AC087477.2-202ENST00000558499 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
AC087477.2-202ENST00000558499 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
AC087477.2-202ENST00000558499 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
AC087477.2-202ENST00000558499 PCGF6Q9BYE7 350 aa12.44□□□□□ -0.42
AC087477.2-202ENST00000558499 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
AC087477.2-202ENST00000558499 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
AC087477.2-202ENST00000558499 LOC105371045A0A1W2PR82 267 aa12.29□□□□□ -0.44
AC087477.2-202ENST00000558499 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
AC087477.2-202ENST00000558499 HRCP23327 699 aa12.18□□□□□ -0.46
AC087477.2-202ENST00000558499 CHIC1Q5VXU3 224 aa12.07□□□□□ -0.48
AC087477.2-202ENST00000558499 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
AC087477.2-202ENST00000558499 TTBK1Q5TCY1 1321 aaPredicted RBP11.91□□□□□ -0.5
AC087477.2-202ENST00000558499 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
AC087477.2-202ENST00000558499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
AC087477.2-202ENST00000558499 NEUROD1Q13562 356 aa11.55□□□□□ -0.56
AC087477.2-202ENST00000558499 YTHDC1Q96MU7 727 aaKnown RBP11.49□□□□□ -0.57
AC087477.2-202ENST00000558499 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
AC087477.2-202ENST00000558499 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
AC087477.2-202ENST00000558499 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
AC087477.2-202ENST00000558499 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
AC087477.2-202ENST00000558499 CCER1Q8TC90 406 aaPredicted RBP11.26□□□□□ -0.61
AC087477.2-202ENST00000558499 ZCCHC6Q5VYS8 1495 aaKnown RBP11.26□□□□□ -0.61
AC087477.2-202ENST00000558499 ACIN1Q9UKV3 1341 aaKnown RBP11.21□□□□□ -0.61
AC087477.2-202ENST00000558499 DCAF1Q9Y4B6 1507 aa11.2□□□□□ -0.62
AC087477.2-202ENST00000558499 DIEXFQ68CQ4 756 aaKnown RBP11.17□□□□□ -0.62
AC087477.2-202ENST00000558499 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
AC087477.2-202ENST00000558499 MIER1Q8N108 512 aa11.11□□□□□ -0.63
AC087477.2-202ENST00000558499 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
AC087477.2-202ENST00000558499 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
AC087477.2-202ENST00000558499 CCDC180Q9P1Z9 1646 aa11□□□□□ -0.65
AC087477.2-202ENST00000558499 BCANQ96GW7 911 aa10.99□□□□□ -0.65
AC087477.2-202ENST00000558499 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
AC087477.2-202ENST00000558499 CECR2Q9BXF3 1484 aa10.97□□□□□ -0.65
AC087477.2-202ENST00000558499 HIRIP3Q9BW71 556 aaPredicted RBP10.93□□□□□ -0.66
AC087477.2-202ENST00000558499 SCRIBQ14160 1630 aa10.92□□□□□ -0.66
AC087477.2-202ENST00000558499 RUSC2Q8N2Y8 1516 aa10.9□□□□□ -0.66
AC087477.2-202ENST00000558499 ZEB1P37275 1124 aaPredicted RBP10.88□□□□□ -0.67
AC087477.2-202ENST00000558499 UBTFP17480 764 aaKnown RBP10.88□□□□□ -0.67
AC087477.2-202ENST00000558499 SENP3-EIF4A1A0A087X0R7 540 aa10.86□□□□□ -0.67
AC087477.2-202ENST00000558499 ITGAEP38570 1179 aa10.86□□□□□ -0.67
AC087477.2-202ENST00000558499 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
AC087477.2-202ENST00000558499 SOGA1O94964 1423 aa10.84□□□□□ -0.67
AC087477.2-202ENST00000558499 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
AC087477.2-202ENST00000558499 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
AC087477.2-202ENST00000558499 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
AC087477.2-202ENST00000558499 CENPBP07199 599 aaPredicted RBP10.78□□□□□ -0.68
AC087477.2-202ENST00000558499 MROH2BQ7Z745 1585 aa10.74□□□□□ -0.69
AC087477.2-202ENST00000558499 ABCC9O60706 1549 aa10.73□□□□□ -0.69
AC087477.2-202ENST00000558499 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
AC087477.2-202ENST00000558499 IRX6P78412 446 aaPredicted RBP10.72□□□□□ -0.69
AC087477.2-202ENST00000558499 SUPT16HQ9Y5B9 1047 aaKnown RBP10.72□□□□□ -0.69
AC087477.2-202ENST00000558499 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
AC087477.2-202ENST00000558499 WIZO95785 1651 aa10.7□□□□□ -0.7
AC087477.2-202ENST00000558499 CNGB1Q14028 1251 aaPredicted RBP10.69□□□□□ -0.7
AC087477.2-202ENST00000558499 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
AC087477.2-202ENST00000558499 TRIM52Q96A61 297 aa10.67□□□□□ -0.7
AC087477.2-202ENST00000558499 CEP162Q5TB80 1403 aa10.67□□□□□ -0.7
AC087477.2-202ENST00000558499 KANK4Q5T7N3 995 aaPredicted RBP10.64□□□□□ -0.71
AC087477.2-202ENST00000558499 SIN3AQ96ST3 1273 aa10.58□□□□□ -0.72
AC087477.2-202ENST00000558499 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
AC087477.2-202ENST00000558499 DDX10Q13206 875 aaKnown RBP10.57□□□□□ -0.72
AC087477.2-202ENST00000558499 FKBP8Q14318 412 aa10.56□□□□□ -0.72
AC087477.2-202ENST00000558499 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.72
AC087477.2-202ENST00000558499 MSH5O43196 834 aa10.52□□□□□ -0.73
AC087477.2-202ENST00000558499 P3H3Q8IVL6 736 aa10.51□□□□□ -0.73
AC087477.2-202ENST00000558499 ATP1B4Q9UN42 357 aaPredicted RBP10.47□□□□□ -0.73
AC087477.2-202ENST00000558499 CCDC184Q52MB2 194 aa10.43□□□□□ -0.74
AC087477.2-202ENST00000558499 RBM19Q9Y4C8 960 aaKnown RBP10.41□□□□□ -0.74
AC087477.2-202ENST00000558499 ANP32EQ9BTT0 268 aa10.41□□□□□ -0.74
AC087477.2-202ENST00000558499 RAPGEF2Q9Y4G8 1499 aa10.4□□□□□ -0.74
AC087477.2-202ENST00000558499 DHX57Q6P158 1386 aaKnown RBP10.39□□□□□ -0.75
AC087477.2-202ENST00000558499 CLIP1P30622 1438 aa10.39□□□□□ -0.75
AC087477.2-202ENST00000558499 ARID3CA6NKF2 412 aa10.38□□□□□ -0.75
AC087477.2-202ENST00000558499 APLP2Q06481 763 aa10.35□□□□□ -0.75
AC087477.2-202ENST00000558499 TNIKQ9UKE5 1360 aa10.34□□□□□ -0.75
AC087477.2-202ENST00000558499 SKAP1Q86WV1 359 aa10.34□□□□□ -0.75
AC087477.2-202ENST00000558499 FAM50AQ14320 339 aaKnown RBP10.32□□□□□ -0.76
AC087477.2-202ENST00000558499 NBR1Q14596 966 aa10.31□□□□□ -0.76
AC087477.2-202ENST00000558499 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
AC087477.2-202ENST00000558499 CCDC136Q96JN2 1154 aa10.3□□□□□ -0.76
AC087477.2-202ENST00000558499 FOXD1Q16676 465 aa10.3□□□□□ -0.76
AC087477.2-202ENST00000558499 WRNQ14191 1432 aaPredicted RBP eCLIP10.3□□□□□ -0.76
AC087477.2-202ENST00000558499 B4GALNT3Q6L9W6 998 aa10.29□□□□□ -0.76
AC087477.2-202ENST00000558499 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.76
AC087477.2-202ENST00000558499 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
AC087477.2-202ENST00000558499 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
AC087477.2-202ENST00000558499 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
AC087477.2-202ENST00000558499 SYNJ1O43426 1573 aa10.24□□□□□ -0.77
AC087477.2-202ENST00000558499 HNRNPUQ00839 825 aaKnown RBP eCLIP10.23□□□□□ -0.77
AC087477.2-202ENST00000558499 NACADO15069 1562 aa10.23□□□□□ -0.77
AC087477.2-202ENST00000558499 SALL2Q9Y467 1007 aaPredicted RBP10.22□□□□□ -0.77
AC087477.2-202ENST00000558499 WDR97A6NE52 1622 aa10.22□□□□□ -0.77
AC087477.2-202ENST00000558499 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
AC087477.2-202ENST00000558499 ARAP1Q96P48 1450 aa10.21□□□□□ -0.77
AC087477.2-202ENST00000558499 RAB3GAP2Q9H2M9 1393 aa10.21□□□□□ -0.77
AC087477.2-202ENST00000558499 POLR3GLQ9BT43 218 aa10.21□□□□□ -0.78
AC087477.2-202ENST00000558499 C11orf95C9JLR9 678 aaPredicted RBP10.2□□□□□ -0.78
AC087477.2-202ENST00000558499 CHIC2Q9UKJ5 165 aa10.2□□□□□ -0.78
AC087477.2-202ENST00000558499 FAM9BQ8IZU0 186 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms