RNA–Protein interactions for RNA: ENST00000558466.5

SNX22-203, Transcript of sorting nexin 22, humanhuman

TSL 5

Gene SNX22, Length 1,353 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-203ENST00000558466 NISCHQ9Y2I1 1504 aa45.75■■■■■ 4.91
SNX22-203ENST00000558466 CCDC180Q9P1Z9 1646 aa40.44■■■■■ 4.07
SNX22-203ENST00000558466 ABCC9O60706 1549 aa39.27■■■■□ 3.88
SNX22-203ENST00000558466 ZCCHC6Q5VYS8 1495 aaKnown RBP38.18■■■■□ 3.7
SNX22-203ENST00000558466 NACADO15069 1562 aa38■■■■□ 3.67
SNX22-203ENST00000558466 DCAF8L2P0C7V8 631 aa37.99■■■■□ 3.67
SNX22-203ENST00000558466 MYO15BQ96JP2 1530 aa37.96■■■■□ 3.67
SNX22-203ENST00000558466 RB1CC1Q8TDY2 1594 aa37.91■■■■□ 3.66
SNX22-203ENST00000558466 DCAF1Q9Y4B6 1507 aa37.9■■■■□ 3.66
SNX22-203ENST00000558466 UNC13AQ9UPW8 1703 aa37.04■■■■□ 3.52
SNX22-203ENST00000558466 SCRIBQ14160 1630 aa36.9■■■■□ 3.5
SNX22-203ENST00000558466 BICRAQ9NZM4 1560 aa36.83■■■■□ 3.49
SNX22-203ENST00000558466 PABPN1Q86U42 306 aaKnown RBP eCLIP36.79■■■■□ 3.48
SNX22-203ENST00000558466 DNAJC5BQ9UF47 199 aa36.66■■■■□ 3.46
SNX22-203ENST00000558466 SHROOM4Q9ULL8 1493 aa36.45■■■■□ 3.43
SNX22-203ENST00000558466 EIF4G1Q04637 1599 aaKnown RBP35.79■■■■□ 3.32
SNX22-203ENST00000558466 CECR2Q9BXF3 1484 aa35.62■■■■□ 3.29
SNX22-203ENST00000558466 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
SNX22-203ENST00000558466 BAZ1AQ9NRL2 1556 aaPredicted RBP35.39■■■■□ 3.26
SNX22-203ENST00000558466 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
SNX22-203ENST00000558466 MROH2BQ7Z745 1585 aa35.26■■■■□ 3.23
SNX22-203ENST00000558466 ATAD2BQ9ULI0 1458 aa35.16■■■■□ 3.22
SNX22-203ENST00000558466 NCAPD3P42695 1498 aa35.12■■■■□ 3.21
SNX22-203ENST00000558466 PEG3Q9GZU2 1588 aa35.1■■■■□ 3.21
SNX22-203ENST00000558466 SMARCA2P51531 1590 aa35.08■■■■□ 3.21
SNX22-203ENST00000558466 RSF1Q96T23 1441 aaPredicted RBP35.01■■■■□ 3.2
SNX22-203ENST00000558466 HMGXB3Q12766 1538 aa34.92■■■■□ 3.18
SNX22-203ENST00000558466 WIZO95785 1651 aa34.84■■■■□ 3.17
SNX22-203ENST00000558466 BAZ1BQ9UIG0 1483 aaKnown RBP34.82■■■■□ 3.16
SNX22-203ENST00000558466 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.11
SNX22-203ENST00000558466 DNAJC5Q9H3Z4 198 aa34.36■■■■□ 3.09
SNX22-203ENST00000558466 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
SNX22-203ENST00000558466 CCDC88BA6NC98 1476 aa34.15■■■■□ 3.06
SNX22-203ENST00000558466 NESP48681 1621 aa34.11■■■■□ 3.05
SNX22-203ENST00000558466 CADPSQ9ULU8 1353 aa34.1■■■■□ 3.05
SNX22-203ENST00000558466 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
SNX22-203ENST00000558466 CFTRP13569 1480 aa33.97■■■■□ 3.03
SNX22-203ENST00000558466 PDS5BQ9NTI5 1447 aa33.83■■■■□ 3.01
SNX22-203ENST00000558466 ERCC6Q03468 1493 aa33.77■■■■□ 3
SNX22-203ENST00000558466 FANCD2Q9BXW9 1451 aa33.65■■■□□ 2.98
SNX22-203ENST00000558466 KIF21AQ7Z4S6 1674 aa33.65■■■□□ 2.98
SNX22-203ENST00000558466 PRDM2Q13029 1718 aa33.59■■■□□ 2.97
SNX22-203ENST00000558466 CEP164Q9UPV0 1460 aa33.54■■■□□ 2.96
SNX22-203ENST00000558466 THOC2Q8NI27 1593 aaKnown RBP33.5■■■□□ 2.95
SNX22-203ENST00000558466 MRC2Q9UBG0 1479 aa33.45■■■□□ 2.95
SNX22-203ENST00000558466 CUX2O14529 1486 aa33.37■■■□□ 2.93
SNX22-203ENST00000558466 WDR62O43379 1518 aa33.34■■■□□ 2.93
SNX22-203ENST00000558466 URB2Q14146 1524 aaKnown RBP33.32■■■□□ 2.92
SNX22-203ENST00000558466 ABCC8Q09428 1581 aa33.18■■■□□ 2.9
SNX22-203ENST00000558466 TOPBP1Q92547 1522 aa33.17■■■□□ 2.9
SNX22-203ENST00000558466 DNMBPQ6XZF7 1577 aa33.13■■■□□ 2.89
SNX22-203ENST00000558466 CUX1P39880 1505 aa33.05■■■□□ 2.88
SNX22-203ENST00000558466 WRNQ14191 1432 aaPredicted RBP eCLIP32.95■■■□□ 2.86
SNX22-203ENST00000558466 POLA1P09884 1462 aaPredicted RBP32.91■■■□□ 2.86
SNX22-203ENST00000558466 IFT140Q96RY7 1462 aa32.86■■■□□ 2.85
SNX22-203ENST00000558466 FGD5Q6ZNL6 1462 aa32.86■■■□□ 2.85
SNX22-203ENST00000558466 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
SNX22-203ENST00000558466 TOP2BQ02880 1626 aa32.83■■■□□ 2.85
SNX22-203ENST00000558466 BIVM-ERCC5R4GMW8 1640 aa32.81■■■□□ 2.84
SNX22-203ENST00000558466 SOGA1O94964 1423 aa32.78■■■□□ 2.84
SNX22-203ENST00000558466 TARBP1Q13395 1621 aaKnown RBP32.78■■■□□ 2.84
SNX22-203ENST00000558466 RAD54L2Q9Y4B4 1467 aa32.77■■■□□ 2.84
SNX22-203ENST00000558466 ZNF608Q9ULD9 1512 aaPredicted RBP32.71■■■□□ 2.83
SNX22-203ENST00000558466 ABCA10Q8WWZ4 1543 aa32.6■■■□□ 2.81
SNX22-203ENST00000558466 AQRO60306 1485 aaKnown RBP eCLIP32.57■■■□□ 2.8
SNX22-203ENST00000558466 TDRD9Q8NDG6 1382 aaKnown RBP32.56■■■□□ 2.8
SNX22-203ENST00000558466 WDR97A6NE52 1622 aa32.55■■■□□ 2.8
SNX22-203ENST00000558466 EIF4G3O43432 1585 aaKnown RBP32.52■■■□□ 2.8
SNX22-203ENST00000558466 GAPVD1Q14C86 1478 aa32.4■■■□□ 2.78
SNX22-203ENST00000558466 ABCA5Q8WWZ7 1642 aa32.39■■■□□ 2.78
SNX22-203ENST00000558466 TRIM41Q8WV44 630 aa32.38■■■□□ 2.77
SNX22-203ENST00000558466 GRIN2BQ13224 1484 aa32.34■■■□□ 2.77
SNX22-203ENST00000558466 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
SNX22-203ENST00000558466 SNAPC4Q5SXM2 1469 aa32.23■■■□□ 2.75
SNX22-203ENST00000558466 KIF27Q86VH2 1401 aa32.22■■■□□ 2.75
SNX22-203ENST00000558466 MAGI1Q96QZ7 1491 aaPredicted RBP32.22■■■□□ 2.75
SNX22-203ENST00000558466 PBRM1Q86U86 1689 aa32.21■■■□□ 2.75
SNX22-203ENST00000558466 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
SNX22-203ENST00000558466 IGF1RP08069 1367 aa32.14■■■□□ 2.74
SNX22-203ENST00000558466 SYNJ2O15056 1496 aa32.09■■■□□ 2.73
SNX22-203ENST00000558466 RUSC2Q8N2Y8 1516 aa32.08■■■□□ 2.73
SNX22-203ENST00000558466 OSCARQ8IYS5 282 aa32.07■■■□□ 2.73
SNX22-203ENST00000558466 FHAD1B1AJZ9 1412 aa32.05■■■□□ 2.72
SNX22-203ENST00000558466 CHMP7Q8WUX9 453 aaPredicted RBP32.05■■■□□ 2.72
SNX22-203ENST00000558466 ADAMTS12P58397 1594 aa32.04■■■□□ 2.72
SNX22-203ENST00000558466 FBLN2P98095 1184 aa32.04■■■□□ 2.72
SNX22-203ENST00000558466 CHD1O14646 1710 aa32.01■■■□□ 2.72
SNX22-203ENST00000558466 GRIN2AQ12879 1464 aa31.93■■■□□ 2.7
SNX22-203ENST00000558466 CARMIL1Q5VZK9 1371 aa31.91■■■□□ 2.7
SNX22-203ENST00000558466 CUL7Q14999 1698 aa31.9■■■□□ 2.7
SNX22-203ENST00000558466 EEA1Q15075 1411 aa31.84■■■□□ 2.69
SNX22-203ENST00000558466 NUP160Q12769 1436 aa31.83■■■□□ 2.69
SNX22-203ENST00000558466 CSRNP3Q8WYN3 585 aa31.79■■■□□ 2.68
SNX22-203ENST00000558466 CLASP1Q7Z460 1538 aa31.77■■■□□ 2.68
SNX22-203ENST00000558466 PRXQ9BXM0 1461 aa31.76■■■□□ 2.67
SNX22-203ENST00000558466 CEP170Q5SW79 1584 aa31.75■■■□□ 2.67
SNX22-203ENST00000558466 RAPGEF2Q9Y4G8 1499 aa31.73■■■□□ 2.67
SNX22-203ENST00000558466 FAM9AQ8IZU1 332 aaPredicted RBP31.66■■■□□ 2.66
SNX22-203ENST00000558466 KIAA0586Q9BVV6 1533 aa31.58■■■□□ 2.65
SNX22-203ENST00000558466 ARHGEF11O15085 1522 aa31.51■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms