RNA–Protein interactions for RNA: ENST00000558462.5

ZNF839-204, Transcript of zinc finger protein 839, humanhuman

TSL 3

Gene ZNF839, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF839-204ENST00000558462 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
ZNF839-204ENST00000558462 CCDC180Q9P1Z9 1646 aa27.58■■■□□ 2.01
ZNF839-204ENST00000558462 ABCC9O60706 1549 aa27.34■■□□□ 1.97
ZNF839-204ENST00000558462 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
ZNF839-204ENST00000558462 NACADO15069 1562 aa26.02■■□□□ 1.76
ZNF839-204ENST00000558462 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
ZNF839-204ENST00000558462 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
ZNF839-204ENST00000558462 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
ZNF839-204ENST00000558462 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
ZNF839-204ENST00000558462 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
ZNF839-204ENST00000558462 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
ZNF839-204ENST00000558462 BICRAQ9NZM4 1560 aa25.51■■□□□ 1.67
ZNF839-204ENST00000558462 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
ZNF839-204ENST00000558462 SHROOM4Q9ULL8 1493 aa25.07■■□□□ 1.6
ZNF839-204ENST00000558462 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
ZNF839-204ENST00000558462 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
ZNF839-204ENST00000558462 CC2D2AQ9P2K1 1620 aa24.76■■□□□ 1.55
ZNF839-204ENST00000558462 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
ZNF839-204ENST00000558462 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
ZNF839-204ENST00000558462 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
ZNF839-204ENST00000558462 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
ZNF839-204ENST00000558462 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
ZNF839-204ENST00000558462 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
ZNF839-204ENST00000558462 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
ZNF839-204ENST00000558462 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
ZNF839-204ENST00000558462 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
ZNF839-204ENST00000558462 BAZ1BQ9UIG0 1483 aaKnown RBP23.67■■□□□ 1.38
ZNF839-204ENST00000558462 NESP48681 1621 aa23.6■■□□□ 1.37
ZNF839-204ENST00000558462 CUX2O14529 1486 aa23.52■■□□□ 1.36
ZNF839-204ENST00000558462 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
ZNF839-204ENST00000558462 WIZO95785 1651 aa23.47■■□□□ 1.35
ZNF839-204ENST00000558462 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
ZNF839-204ENST00000558462 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
ZNF839-204ENST00000558462 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
ZNF839-204ENST00000558462 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
ZNF839-204ENST00000558462 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
ZNF839-204ENST00000558462 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
ZNF839-204ENST00000558462 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
ZNF839-204ENST00000558462 TOP2AP11388 1531 aaKnown RBP23.16■■□□□ 1.3
ZNF839-204ENST00000558462 CFTRP13569 1480 aa23.1■■□□□ 1.29
ZNF839-204ENST00000558462 WDR62O43379 1518 aa23.06■■□□□ 1.28
ZNF839-204ENST00000558462 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
ZNF839-204ENST00000558462 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
ZNF839-204ENST00000558462 CEP164Q9UPV0 1460 aa22.96■■□□□ 1.27
ZNF839-204ENST00000558462 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
ZNF839-204ENST00000558462 PRDM2Q13029 1718 aa22.86■■□□□ 1.25
ZNF839-204ENST00000558462 URB2Q14146 1524 aaKnown RBP22.86■■□□□ 1.25
ZNF839-204ENST00000558462 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
ZNF839-204ENST00000558462 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
ZNF839-204ENST00000558462 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
ZNF839-204ENST00000558462 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
ZNF839-204ENST00000558462 ABCC8Q09428 1581 aa22.51■■□□□ 1.19
ZNF839-204ENST00000558462 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
ZNF839-204ENST00000558462 OSCARQ8IYS5 282 aa22.41■■□□□ 1.18
ZNF839-204ENST00000558462 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.17
ZNF839-204ENST00000558462 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
ZNF839-204ENST00000558462 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.16
ZNF839-204ENST00000558462 CUX1P39880 1505 aa22.31■■□□□ 1.16
ZNF839-204ENST00000558462 RAD54L2Q9Y4B4 1467 aa22.3■■□□□ 1.16
ZNF839-204ENST00000558462 SOGA1O94964 1423 aa22.24■■□□□ 1.15
ZNF839-204ENST00000558462 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
ZNF839-204ENST00000558462 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
ZNF839-204ENST00000558462 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
ZNF839-204ENST00000558462 RIMBP3CA6NJZ7 1639 aa22.19■■□□□ 1.14
ZNF839-204ENST00000558462 RIMBP3BA6NNM3 1639 aa22.19■■□□□ 1.14
ZNF839-204ENST00000558462 RIMBP3Q9UFD9 1639 aa22.19■■□□□ 1.14
ZNF839-204ENST00000558462 CHD1O14646 1710 aa22.19■■□□□ 1.14
ZNF839-204ENST00000558462 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
ZNF839-204ENST00000558462 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
ZNF839-204ENST00000558462 ARHGEF11O15085 1522 aa22.12■■□□□ 1.13
ZNF839-204ENST00000558462 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
ZNF839-204ENST00000558462 ABCA10Q8WWZ4 1543 aa22.04■■□□□ 1.12
ZNF839-204ENST00000558462 GRIN2BQ13224 1484 aa22.03■■□□□ 1.12
ZNF839-204ENST00000558462 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
ZNF839-204ENST00000558462 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.11
ZNF839-204ENST00000558462 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
ZNF839-204ENST00000558462 CLASP1Q7Z460 1538 aa22■■□□□ 1.11
ZNF839-204ENST00000558462 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
ZNF839-204ENST00000558462 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
ZNF839-204ENST00000558462 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
ZNF839-204ENST00000558462 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
ZNF839-204ENST00000558462 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
ZNF839-204ENST00000558462 FBLN2P98095 1184 aa21.95■■□□□ 1.1
ZNF839-204ENST00000558462 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
ZNF839-204ENST00000558462 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
ZNF839-204ENST00000558462 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
ZNF839-204ENST00000558462 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
ZNF839-204ENST00000558462 ADAMTS12P58397 1594 aa21.79■■□□□ 1.08
ZNF839-204ENST00000558462 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
ZNF839-204ENST00000558462 NUP160Q12769 1436 aa21.75■■□□□ 1.07
ZNF839-204ENST00000558462 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
ZNF839-204ENST00000558462 CEP170Q5SW79 1584 aa21.73■■□□□ 1.07
ZNF839-204ENST00000558462 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
ZNF839-204ENST00000558462 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
ZNF839-204ENST00000558462 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
ZNF839-204ENST00000558462 IGF1RP08069 1367 aa21.54■■□□□ 1.04
ZNF839-204ENST00000558462 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
ZNF839-204ENST00000558462 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
ZNF839-204ENST00000558462 TRHP20396 242 aaPredicted RBP21.45■■□□□ 1.02
ZNF839-204ENST00000558462 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms