RNA–Protein interactions for RNA: ENST00000558421.1

AC013356.4-201, humanhuman

TSL 2 BASIC

Gene AC013356.4, Length 482 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013356.4-201ENST00000558421 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
AC013356.4-201ENST00000558421 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.91
AC013356.4-201ENST00000558421 ABCC9O60706 1549 aa26.44■■□□□ 1.82
AC013356.4-201ENST00000558421 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
AC013356.4-201ENST00000558421 NACADO15069 1562 aa25.39■■□□□ 1.66
AC013356.4-201ENST00000558421 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
AC013356.4-201ENST00000558421 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
AC013356.4-201ENST00000558421 ZCCHC6Q5VYS8 1495 aaKnown RBP25.22■■□□□ 1.63
AC013356.4-201ENST00000558421 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
AC013356.4-201ENST00000558421 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
AC013356.4-201ENST00000558421 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
AC013356.4-201ENST00000558421 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.54
AC013356.4-201ENST00000558421 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
AC013356.4-201ENST00000558421 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
AC013356.4-201ENST00000558421 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
AC013356.4-201ENST00000558421 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
AC013356.4-201ENST00000558421 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
AC013356.4-201ENST00000558421 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
AC013356.4-201ENST00000558421 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
AC013356.4-201ENST00000558421 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
AC013356.4-201ENST00000558421 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
AC013356.4-201ENST00000558421 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
AC013356.4-201ENST00000558421 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
AC013356.4-201ENST00000558421 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
AC013356.4-201ENST00000558421 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
AC013356.4-201ENST00000558421 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
AC013356.4-201ENST00000558421 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
AC013356.4-201ENST00000558421 WIZO95785 1651 aa23.08■■□□□ 1.29
AC013356.4-201ENST00000558421 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
AC013356.4-201ENST00000558421 NESP48681 1621 aa22.86■■□□□ 1.25
AC013356.4-201ENST00000558421 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
AC013356.4-201ENST00000558421 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
AC013356.4-201ENST00000558421 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
AC013356.4-201ENST00000558421 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
AC013356.4-201ENST00000558421 PDS5BQ9NTI5 1447 aa22.7■■□□□ 1.22
AC013356.4-201ENST00000558421 CUX2O14529 1486 aa22.62■■□□□ 1.21
AC013356.4-201ENST00000558421 CFTRP13569 1480 aa22.6■■□□□ 1.21
AC013356.4-201ENST00000558421 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
AC013356.4-201ENST00000558421 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
AC013356.4-201ENST00000558421 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
AC013356.4-201ENST00000558421 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
AC013356.4-201ENST00000558421 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
AC013356.4-201ENST00000558421 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
AC013356.4-201ENST00000558421 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
AC013356.4-201ENST00000558421 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
AC013356.4-201ENST00000558421 WDR62O43379 1518 aa22.36■■□□□ 1.17
AC013356.4-201ENST00000558421 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
AC013356.4-201ENST00000558421 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
AC013356.4-201ENST00000558421 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
AC013356.4-201ENST00000558421 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
AC013356.4-201ENST00000558421 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
AC013356.4-201ENST00000558421 IFT140Q96RY7 1462 aa22■■□□□ 1.11
AC013356.4-201ENST00000558421 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
AC013356.4-201ENST00000558421 CUX1P39880 1505 aa21.9■■□□□ 1.1
AC013356.4-201ENST00000558421 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
AC013356.4-201ENST00000558421 SOGA1O94964 1423 aa21.86■■□□□ 1.09
AC013356.4-201ENST00000558421 TARBP1Q13395 1621 aaKnown RBP21.85■■□□□ 1.09
AC013356.4-201ENST00000558421 FGD5Q6ZNL6 1462 aa21.84■■□□□ 1.09
AC013356.4-201ENST00000558421 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
AC013356.4-201ENST00000558421 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.07
AC013356.4-201ENST00000558421 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
AC013356.4-201ENST00000558421 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
AC013356.4-201ENST00000558421 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
AC013356.4-201ENST00000558421 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
AC013356.4-201ENST00000558421 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
AC013356.4-201ENST00000558421 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
AC013356.4-201ENST00000558421 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
AC013356.4-201ENST00000558421 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
AC013356.4-201ENST00000558421 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
AC013356.4-201ENST00000558421 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
AC013356.4-201ENST00000558421 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.05
AC013356.4-201ENST00000558421 SNAPC4Q5SXM2 1469 aa21.55■■□□□ 1.04
AC013356.4-201ENST00000558421 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
AC013356.4-201ENST00000558421 FBLN2P98095 1184 aa21.53■■□□□ 1.04
AC013356.4-201ENST00000558421 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
AC013356.4-201ENST00000558421 CHD1O14646 1710 aa21.5■■□□□ 1.03
AC013356.4-201ENST00000558421 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
AC013356.4-201ENST00000558421 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
AC013356.4-201ENST00000558421 SYNJ2O15056 1496 aa21.45■■□□□ 1.03
AC013356.4-201ENST00000558421 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
AC013356.4-201ENST00000558421 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
AC013356.4-201ENST00000558421 ADAMTS12P58397 1594 aa21.33■■□□□ 1.01
AC013356.4-201ENST00000558421 KIF27Q86VH2 1401 aa21.32■■□□□ 1
AC013356.4-201ENST00000558421 GRIN2AQ12879 1464 aa21.3■■□□□ 1
AC013356.4-201ENST00000558421 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
AC013356.4-201ENST00000558421 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
AC013356.4-201ENST00000558421 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
AC013356.4-201ENST00000558421 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
AC013356.4-201ENST00000558421 ARHGEF11O15085 1522 aa21.29■■□□□ 1
AC013356.4-201ENST00000558421 IGF1RP08069 1367 aa21.27■■□□□ 1
AC013356.4-201ENST00000558421 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
AC013356.4-201ENST00000558421 NUP160Q12769 1436 aa21.22■□□□□ 0.99
AC013356.4-201ENST00000558421 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
AC013356.4-201ENST00000558421 CUL7Q14999 1698 aa21.15■□□□□ 0.98
AC013356.4-201ENST00000558421 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
AC013356.4-201ENST00000558421 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
AC013356.4-201ENST00000558421 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
AC013356.4-201ENST00000558421 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
AC013356.4-201ENST00000558421 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
AC013356.4-201ENST00000558421 SHROOM2Q13796 1616 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms