RNA–Protein interactions for RNA: ENST00000558186.1

AP3S2-205, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-205ENST00000558186 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
AP3S2-205ENST00000558186 ABCC9O60706 1549 aa18.24■□□□□ 0.51
AP3S2-205ENST00000558186 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
AP3S2-205ENST00000558186 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
AP3S2-205ENST00000558186 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
AP3S2-205ENST00000558186 NACADO15069 1562 aa17.22■□□□□ 0.35
AP3S2-205ENST00000558186 DCAF8L2P0C7V8 631 aa16.94■□□□□ 0.3
AP3S2-205ENST00000558186 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
AP3S2-205ENST00000558186 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
AP3S2-205ENST00000558186 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
AP3S2-205ENST00000558186 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
AP3S2-205ENST00000558186 SHROOM4Q9ULL8 1493 aa16.74■□□□□ 0.27
AP3S2-205ENST00000558186 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
AP3S2-205ENST00000558186 CECR2Q9BXF3 1484 aa16.53■□□□□ 0.24
AP3S2-205ENST00000558186 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
AP3S2-205ENST00000558186 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
AP3S2-205ENST00000558186 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
AP3S2-205ENST00000558186 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
AP3S2-205ENST00000558186 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
AP3S2-205ENST00000558186 CUX2O14529 1486 aa15.99■□□□□ 0.15
AP3S2-205ENST00000558186 ERCC6Q03468 1493 aa15.88■□□□□ 0.13
AP3S2-205ENST00000558186 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
AP3S2-205ENST00000558186 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
AP3S2-205ENST00000558186 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
AP3S2-205ENST00000558186 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.11
AP3S2-205ENST00000558186 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
AP3S2-205ENST00000558186 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
AP3S2-205ENST00000558186 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.09
AP3S2-205ENST00000558186 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
AP3S2-205ENST00000558186 NESP48681 1621 aa15.54■□□□□ 0.08
AP3S2-205ENST00000558186 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
AP3S2-205ENST00000558186 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
AP3S2-205ENST00000558186 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
AP3S2-205ENST00000558186 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
AP3S2-205ENST00000558186 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
AP3S2-205ENST00000558186 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
AP3S2-205ENST00000558186 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.05
AP3S2-205ENST00000558186 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
AP3S2-205ENST00000558186 WDR62O43379 1518 aa15.29■□□□□ 0.04
AP3S2-205ENST00000558186 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
AP3S2-205ENST00000558186 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
AP3S2-205ENST00000558186 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
AP3S2-205ENST00000558186 WIZO95785 1651 aa15.11■□□□□ 0.01
AP3S2-205ENST00000558186 CFTRP13569 1480 aa15.1■□□□□ 0.01
AP3S2-205ENST00000558186 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
AP3S2-205ENST00000558186 URB2Q14146 1524 aaKnown RBP14.98□□□□□ -0.01
AP3S2-205ENST00000558186 PRDM2Q13029 1718 aa14.97□□□□□ -0.01
AP3S2-205ENST00000558186 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
AP3S2-205ENST00000558186 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
AP3S2-205ENST00000558186 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
AP3S2-205ENST00000558186 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
AP3S2-205ENST00000558186 ABCC8Q09428 1581 aa14.93□□□□□ -0.02
AP3S2-205ENST00000558186 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
AP3S2-205ENST00000558186 ARHGEF11O15085 1522 aa14.88□□□□□ -0.03
AP3S2-205ENST00000558186 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
AP3S2-205ENST00000558186 ZNF608Q9ULD9 1512 aaPredicted RBP14.82□□□□□ -0.04
AP3S2-205ENST00000558186 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
AP3S2-205ENST00000558186 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
AP3S2-205ENST00000558186 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.04
AP3S2-205ENST00000558186 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
AP3S2-205ENST00000558186 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
AP3S2-205ENST00000558186 CHD1O14646 1710 aa14.72□□□□□ -0.05
AP3S2-205ENST00000558186 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
AP3S2-205ENST00000558186 FBLN2P98095 1184 aa14.69□□□□□ -0.06
AP3S2-205ENST00000558186 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
AP3S2-205ENST00000558186 AQRO60306 1485 aaKnown RBP eCLIP14.67□□□□□ -0.06
AP3S2-205ENST00000558186 ARAP1Q96P48 1450 aa14.67□□□□□ -0.06
AP3S2-205ENST00000558186 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
AP3S2-205ENST00000558186 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
AP3S2-205ENST00000558186 SOGA1O94964 1423 aa14.61□□□□□ -0.07
AP3S2-205ENST00000558186 AEBP2Q6ZN18 517 aaPredicted RBP14.61□□□□□ -0.07
AP3S2-205ENST00000558186 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
AP3S2-205ENST00000558186 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
AP3S2-205ENST00000558186 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
AP3S2-205ENST00000558186 TDRD9Q8NDG6 1382 aaKnown RBP14.55□□□□□ -0.08
AP3S2-205ENST00000558186 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
AP3S2-205ENST00000558186 SNAPC4Q5SXM2 1469 aa14.54□□□□□ -0.08
AP3S2-205ENST00000558186 SYNJ2O15056 1496 aa14.52□□□□□ -0.08
AP3S2-205ENST00000558186 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
AP3S2-205ENST00000558186 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
AP3S2-205ENST00000558186 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
AP3S2-205ENST00000558186 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
AP3S2-205ENST00000558186 CUX1P39880 1505 aa14.41□□□□□ -0.1
AP3S2-205ENST00000558186 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
AP3S2-205ENST00000558186 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
AP3S2-205ENST00000558186 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
AP3S2-205ENST00000558186 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
AP3S2-205ENST00000558186 NUP160Q12769 1436 aa14.28□□□□□ -0.12
AP3S2-205ENST00000558186 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
AP3S2-205ENST00000558186 FHAD1B1AJZ9 1412 aa14.26□□□□□ -0.13
AP3S2-205ENST00000558186 ADAMTS12P58397 1594 aa14.26□□□□□ -0.13
AP3S2-205ENST00000558186 SHROOM2Q13796 1616 aa14.25□□□□□ -0.13
AP3S2-205ENST00000558186 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
AP3S2-205ENST00000558186 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
AP3S2-205ENST00000558186 ERCC6L2Q5T890 1561 aa14.19□□□□□ -0.14
AP3S2-205ENST00000558186 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
AP3S2-205ENST00000558186 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
AP3S2-205ENST00000558186 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
AP3S2-205ENST00000558186 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
AP3S2-205ENST00000558186 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 500.2 ms