RNA–Protein interactions for RNA: ENST00000558112.1

PSME1-204, Transcript of proteasome activator subunit 1, humanhuman

TSL 5

Gene PSME1, Length 651 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-204ENST00000558112 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
PSME1-204ENST00000558112 ABCC9O60706 1549 aa20.9■□□□□ 0.94
PSME1-204ENST00000558112 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
PSME1-204ENST00000558112 DCAF8L2P0C7V8 631 aa19.81■□□□□ 0.76
PSME1-204ENST00000558112 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
PSME1-204ENST00000558112 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
PSME1-204ENST00000558112 NACADO15069 1562 aa19.53■□□□□ 0.72
PSME1-204ENST00000558112 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.714e-6■□□□□ 11
PSME1-204ENST00000558112 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
PSME1-204ENST00000558112 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
PSME1-204ENST00000558112 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
PSME1-204ENST00000558112 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
PSME1-204ENST00000558112 SCRIBQ14160 1630 aa18.87■□□□□ 0.61
PSME1-204ENST00000558112 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
PSME1-204ENST00000558112 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
PSME1-204ENST00000558112 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
PSME1-204ENST00000558112 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
PSME1-204ENST00000558112 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
PSME1-204ENST00000558112 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
PSME1-204ENST00000558112 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PSME1-204ENST00000558112 NCAPD3P42695 1498 aa18■□□□□ 0.47
PSME1-204ENST00000558112 CUX2O14529 1486 aa17.99■□□□□ 0.47
PSME1-204ENST00000558112 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
PSME1-204ENST00000558112 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
PSME1-204ENST00000558112 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
PSME1-204ENST00000558112 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
PSME1-204ENST00000558112 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
PSME1-204ENST00000558112 NESP48681 1621 aa17.83■□□□□ 0.44
PSME1-204ENST00000558112 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
PSME1-204ENST00000558112 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
PSME1-204ENST00000558112 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
PSME1-204ENST00000558112 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
PSME1-204ENST00000558112 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
PSME1-204ENST00000558112 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
PSME1-204ENST00000558112 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
PSME1-204ENST00000558112 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
PSME1-204ENST00000558112 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
PSME1-204ENST00000558112 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
PSME1-204ENST00000558112 WIZO95785 1651 aa17.42■□□□□ 0.38
PSME1-204ENST00000558112 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
PSME1-204ENST00000558112 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
PSME1-204ENST00000558112 WDR62O43379 1518 aa17.34■□□□□ 0.37
PSME1-204ENST00000558112 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
PSME1-204ENST00000558112 CFTRP13569 1480 aa17.23■□□□□ 0.35
PSME1-204ENST00000558112 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
PSME1-204ENST00000558112 TOP2AP11388 1531 aaKnown RBP17.2■□□□□ 0.34
PSME1-204ENST00000558112 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
PSME1-204ENST00000558112 FBLN2P98095 1184 aa17.05■□□□□ 0.32
PSME1-204ENST00000558112 IFT140Q96RY7 1462 aa17.04■□□□□ 0.32
PSME1-204ENST00000558112 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
PSME1-204ENST00000558112 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
PSME1-204ENST00000558112 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
PSME1-204ENST00000558112 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
PSME1-204ENST00000558112 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.31
PSME1-204ENST00000558112 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
PSME1-204ENST00000558112 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
PSME1-204ENST00000558112 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
PSME1-204ENST00000558112 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
PSME1-204ENST00000558112 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
PSME1-204ENST00000558112 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
PSME1-204ENST00000558112 DNMBPQ6XZF7 1577 aa16.88■□□□□ 0.29
PSME1-204ENST00000558112 AQRO60306 1485 aaKnown RBP eCLIP16.87■□□□□ 0.291e-7■■■□□ 16.3
PSME1-204ENST00000558112 EIF4G3O43432 1585 aaKnown RBP16.87■□□□□ 0.29
PSME1-204ENST00000558112 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
PSME1-204ENST00000558112 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
PSME1-204ENST00000558112 SOGA1O94964 1423 aa16.79■□□□□ 0.28
PSME1-204ENST00000558112 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
PSME1-204ENST00000558112 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
PSME1-204ENST00000558112 CHD1O14646 1710 aa16.76■□□□□ 0.27
PSME1-204ENST00000558112 TARBP1Q13395 1621 aaKnown RBP16.72■□□□□ 0.27
PSME1-204ENST00000558112 SNAPC4Q5SXM2 1469 aa16.7■□□□□ 0.26
PSME1-204ENST00000558112 FGD5Q6ZNL6 1462 aa16.68■□□□□ 0.26
PSME1-204ENST00000558112 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
PSME1-204ENST00000558112 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
PSME1-204ENST00000558112 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
PSME1-204ENST00000558112 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
PSME1-204ENST00000558112 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
PSME1-204ENST00000558112 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
PSME1-204ENST00000558112 CUX1P39880 1505 aa16.58■□□□□ 0.24
PSME1-204ENST00000558112 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
PSME1-204ENST00000558112 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
PSME1-204ENST00000558112 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
PSME1-204ENST00000558112 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
PSME1-204ENST00000558112 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
PSME1-204ENST00000558112 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
PSME1-204ENST00000558112 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
PSME1-204ENST00000558112 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
PSME1-204ENST00000558112 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
PSME1-204ENST00000558112 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
PSME1-204ENST00000558112 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
PSME1-204ENST00000558112 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
PSME1-204ENST00000558112 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
PSME1-204ENST00000558112 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
PSME1-204ENST00000558112 NUP160Q12769 1436 aa16.27■□□□□ 0.19
PSME1-204ENST00000558112 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
PSME1-204ENST00000558112 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
PSME1-204ENST00000558112 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
PSME1-204ENST00000558112 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
PSME1-204ENST00000558112 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
PSME1-204ENST00000558112 FAM69CQ0P6D2 419 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms