RNA–Protein interactions for RNA: ENST00000557748.5

PGF-208, Transcript of placental growth factor, humanhuman

TSL 2

Gene PGF, Length 875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-208ENST00000557748 NISCHQ9Y2I1 1504 aa32.63■■■□□ 2.81
PGF-208ENST00000557748 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
PGF-208ENST00000557748 ABCC9O60706 1549 aa27.77■■■□□ 2.04
PGF-208ENST00000557748 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
PGF-208ENST00000557748 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
PGF-208ENST00000557748 MYO15BQ96JP2 1530 aa27.05■■□□□ 1.92
PGF-208ENST00000557748 NACADO15069 1562 aa27.03■■□□□ 1.92
PGF-208ENST00000557748 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.9
PGF-208ENST00000557748 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
PGF-208ENST00000557748 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
PGF-208ENST00000557748 SCRIBQ14160 1630 aa26.33■■□□□ 1.81
PGF-208ENST00000557748 BICRAQ9NZM4 1560 aa26.15■■□□□ 1.78
PGF-208ENST00000557748 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.74
PGF-208ENST00000557748 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
PGF-208ENST00000557748 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
PGF-208ENST00000557748 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
PGF-208ENST00000557748 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
PGF-208ENST00000557748 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
PGF-208ENST00000557748 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
PGF-208ENST00000557748 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.62
PGF-208ENST00000557748 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
PGF-208ENST00000557748 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
PGF-208ENST00000557748 SMARCA2P51531 1590 aa25■■□□□ 1.59
PGF-208ENST00000557748 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
PGF-208ENST00000557748 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
PGF-208ENST00000557748 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
PGF-208ENST00000557748 WIZO95785 1651 aa24.9■■□□□ 1.58
PGF-208ENST00000557748 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
PGF-208ENST00000557748 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
PGF-208ENST00000557748 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
PGF-208ENST00000557748 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
PGF-208ENST00000557748 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
PGF-208ENST00000557748 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
PGF-208ENST00000557748 CADPSQ9ULU8 1353 aa24.17■■□□□ 1.46
PGF-208ENST00000557748 NESP48681 1621 aa24.17■■□□□ 1.46
PGF-208ENST00000557748 CFTRP13569 1480 aa24.16■■□□□ 1.46
PGF-208ENST00000557748 PRDM2Q13029 1718 aa24.08■■□□□ 1.45
PGF-208ENST00000557748 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
PGF-208ENST00000557748 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
PGF-208ENST00000557748 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
PGF-208ENST00000557748 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
PGF-208ENST00000557748 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
PGF-208ENST00000557748 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
PGF-208ENST00000557748 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
PGF-208ENST00000557748 WDR62O43379 1518 aa23.69■■□□□ 1.38
PGF-208ENST00000557748 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
PGF-208ENST00000557748 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
PGF-208ENST00000557748 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
PGF-208ENST00000557748 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
PGF-208ENST00000557748 CUX1P39880 1505 aa23.58■■□□□ 1.36
PGF-208ENST00000557748 CUX2O14529 1486 aa23.56■■□□□ 1.36
PGF-208ENST00000557748 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
PGF-208ENST00000557748 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
PGF-208ENST00000557748 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
PGF-208ENST00000557748 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
PGF-208ENST00000557748 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
PGF-208ENST00000557748 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
PGF-208ENST00000557748 IFT140Q96RY7 1462 aa23.35■■□□□ 1.33
PGF-208ENST00000557748 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
PGF-208ENST00000557748 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
PGF-208ENST00000557748 SOGA1O94964 1423 aa23.28■■□□□ 1.32
PGF-208ENST00000557748 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
PGF-208ENST00000557748 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
PGF-208ENST00000557748 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
PGF-208ENST00000557748 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
PGF-208ENST00000557748 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
PGF-208ENST00000557748 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
PGF-208ENST00000557748 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
PGF-208ENST00000557748 TDRD9Q8NDG6 1382 aaKnown RBP23.08■■□□□ 1.29
PGF-208ENST00000557748 AQRO60306 1485 aaKnown RBP eCLIP23.08■■□□□ 1.298e-7■■■■□ 23.5
PGF-208ENST00000557748 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
PGF-208ENST00000557748 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
PGF-208ENST00000557748 KIF27Q86VH2 1401 aa23.01■■□□□ 1.27
PGF-208ENST00000557748 GRIN2BQ13224 1484 aa23■■□□□ 1.27
PGF-208ENST00000557748 ERICH3Q5RHP9 1530 aa22.97■■□□□ 1.27
PGF-208ENST00000557748 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
PGF-208ENST00000557748 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
PGF-208ENST00000557748 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
PGF-208ENST00000557748 ADAMTS12P58397 1594 aa22.89■■□□□ 1.25
PGF-208ENST00000557748 EEA1Q15075 1411 aa22.87■■□□□ 1.25
PGF-208ENST00000557748 CUL7Q14999 1698 aa22.86■■□□□ 1.25
PGF-208ENST00000557748 IGF1RP08069 1367 aa22.85■■□□□ 1.25
PGF-208ENST00000557748 SYNJ2O15056 1496 aa22.81■■□□□ 1.24
PGF-208ENST00000557748 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
PGF-208ENST00000557748 CHD1O14646 1710 aa22.79■■□□□ 1.24
PGF-208ENST00000557748 CARMIL1Q5VZK9 1371 aa22.72■■□□□ 1.23
PGF-208ENST00000557748 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
PGF-208ENST00000557748 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
PGF-208ENST00000557748 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
PGF-208ENST00000557748 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
PGF-208ENST00000557748 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
PGF-208ENST00000557748 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
PGF-208ENST00000557748 KIF21BO75037 1637 aa22.64■■□□□ 1.21
PGF-208ENST00000557748 FBLN2P98095 1184 aa22.63■■□□□ 1.21
PGF-208ENST00000557748 NUP160Q12769 1436 aa22.61■■□□□ 1.21
PGF-208ENST00000557748 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
PGF-208ENST00000557748 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
PGF-208ENST00000557748 OSCARQ8IYS5 282 aa22.54■■□□□ 1.2
PGF-208ENST00000557748 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
PGF-208ENST00000557748 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms