RNA–Protein interactions for RNA: ENST00000557732.1

NRDE2-208, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 2

Gene NRDE2, Length 623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-208ENST00000557732 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
NRDE2-208ENST00000557732 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
NRDE2-208ENST00000557732 ABCC9O60706 1549 aa24.45■■□□□ 1.5
NRDE2-208ENST00000557732 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
NRDE2-208ENST00000557732 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
NRDE2-208ENST00000557732 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
NRDE2-208ENST00000557732 NACADO15069 1562 aa23.74■■□□□ 1.39
NRDE2-208ENST00000557732 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
NRDE2-208ENST00000557732 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
NRDE2-208ENST00000557732 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
NRDE2-208ENST00000557732 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
NRDE2-208ENST00000557732 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
NRDE2-208ENST00000557732 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
NRDE2-208ENST00000557732 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
NRDE2-208ENST00000557732 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
NRDE2-208ENST00000557732 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
NRDE2-208ENST00000557732 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
NRDE2-208ENST00000557732 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
NRDE2-208ENST00000557732 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
NRDE2-208ENST00000557732 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
NRDE2-208ENST00000557732 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
NRDE2-208ENST00000557732 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
NRDE2-208ENST00000557732 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
NRDE2-208ENST00000557732 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
NRDE2-208ENST00000557732 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
NRDE2-208ENST00000557732 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
NRDE2-208ENST00000557732 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
NRDE2-208ENST00000557732 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.07
NRDE2-208ENST00000557732 WIZO95785 1651 aa21.76■■□□□ 1.07
NRDE2-208ENST00000557732 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
NRDE2-208ENST00000557732 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.05
NRDE2-208ENST00000557732 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
NRDE2-208ENST00000557732 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
NRDE2-208ENST00000557732 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
NRDE2-208ENST00000557732 LAMC3Q9Y6N6 1575 aa21.27■□□□□ 0.99
NRDE2-208ENST00000557732 NESP48681 1621 aa21.23■□□□□ 0.99
NRDE2-208ENST00000557732 CFTRP13569 1480 aa21.22■□□□□ 0.99
NRDE2-208ENST00000557732 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
NRDE2-208ENST00000557732 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
NRDE2-208ENST00000557732 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
NRDE2-208ENST00000557732 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
NRDE2-208ENST00000557732 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
NRDE2-208ENST00000557732 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
NRDE2-208ENST00000557732 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
NRDE2-208ENST00000557732 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
NRDE2-208ENST00000557732 CUX2O14529 1486 aa20.85■□□□□ 0.93
NRDE2-208ENST00000557732 WDR62O43379 1518 aa20.79■□□□□ 0.92
NRDE2-208ENST00000557732 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
NRDE2-208ENST00000557732 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
NRDE2-208ENST00000557732 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
NRDE2-208ENST00000557732 DNMBPQ6XZF7 1577 aa20.7■□□□□ 0.9
NRDE2-208ENST00000557732 CUX1P39880 1505 aa20.64■□□□□ 0.9
NRDE2-208ENST00000557732 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
NRDE2-208ENST00000557732 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
NRDE2-208ENST00000557732 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
NRDE2-208ENST00000557732 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
NRDE2-208ENST00000557732 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
NRDE2-208ENST00000557732 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
NRDE2-208ENST00000557732 IFT140Q96RY7 1462 aa20.52■□□□□ 0.88
NRDE2-208ENST00000557732 SOGA1O94964 1423 aa20.49■□□□□ 0.87
NRDE2-208ENST00000557732 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
NRDE2-208ENST00000557732 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
NRDE2-208ENST00000557732 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
NRDE2-208ENST00000557732 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
NRDE2-208ENST00000557732 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
NRDE2-208ENST00000557732 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
NRDE2-208ENST00000557732 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
NRDE2-208ENST00000557732 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
NRDE2-208ENST00000557732 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
NRDE2-208ENST00000557732 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
NRDE2-208ENST00000557732 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
NRDE2-208ENST00000557732 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
NRDE2-208ENST00000557732 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
NRDE2-208ENST00000557732 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
NRDE2-208ENST00000557732 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
NRDE2-208ENST00000557732 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
NRDE2-208ENST00000557732 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
NRDE2-208ENST00000557732 PBRM1Q86U86 1689 aa20.11■□□□□ 0.81
NRDE2-208ENST00000557732 IGF1RP08069 1367 aa20.09■□□□□ 0.81
NRDE2-208ENST00000557732 RUSC2Q8N2Y8 1516 aa20.06■□□□□ 0.8
NRDE2-208ENST00000557732 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
NRDE2-208ENST00000557732 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
NRDE2-208ENST00000557732 EEA1Q15075 1411 aa20.02■□□□□ 0.8
NRDE2-208ENST00000557732 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
NRDE2-208ENST00000557732 ADAMTS12P58397 1594 aa20.01■□□□□ 0.79
NRDE2-208ENST00000557732 FBLN2P98095 1184 aa20■□□□□ 0.79
NRDE2-208ENST00000557732 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
NRDE2-208ENST00000557732 CUL7Q14999 1698 aa19.97■□□□□ 0.79
NRDE2-208ENST00000557732 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
NRDE2-208ENST00000557732 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
NRDE2-208ENST00000557732 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
NRDE2-208ENST00000557732 CHD1O14646 1710 aa19.93■□□□□ 0.78
NRDE2-208ENST00000557732 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
NRDE2-208ENST00000557732 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
NRDE2-208ENST00000557732 NUP160Q12769 1436 aa19.86■□□□□ 0.77
NRDE2-208ENST00000557732 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
NRDE2-208ENST00000557732 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
NRDE2-208ENST00000557732 CLASP1Q7Z460 1538 aa19.8■□□□□ 0.76
NRDE2-208ENST00000557732 KIAA0586Q9BVV6 1533 aa19.75■□□□□ 0.75
NRDE2-208ENST00000557732 KIF21BO75037 1637 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms