RNA–Protein interactions for RNA: ENST00000557717.1

AC060814.3-201, humanhuman

BASIC

Gene AC060814.3, Length 460 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC060814.3-201ENST00000557717 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
AC060814.3-201ENST00000557717 ABCC9O60706 1549 aa20.48■□□□□ 0.87
AC060814.3-201ENST00000557717 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.87
AC060814.3-201ENST00000557717 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
AC060814.3-201ENST00000557717 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
AC060814.3-201ENST00000557717 NACADO15069 1562 aa19.38■□□□□ 0.69
AC060814.3-201ENST00000557717 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
AC060814.3-201ENST00000557717 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
AC060814.3-201ENST00000557717 MYO15BQ96JP2 1530 aa19.13■□□□□ 0.65
AC060814.3-201ENST00000557717 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
AC060814.3-201ENST00000557717 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
AC060814.3-201ENST00000557717 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
AC060814.3-201ENST00000557717 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.61
AC060814.3-201ENST00000557717 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
AC060814.3-201ENST00000557717 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
AC060814.3-201ENST00000557717 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
AC060814.3-201ENST00000557717 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
AC060814.3-201ENST00000557717 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
AC060814.3-201ENST00000557717 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
AC060814.3-201ENST00000557717 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
AC060814.3-201ENST00000557717 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
AC060814.3-201ENST00000557717 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
AC060814.3-201ENST00000557717 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
AC060814.3-201ENST00000557717 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
AC060814.3-201ENST00000557717 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
AC060814.3-201ENST00000557717 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
AC060814.3-201ENST00000557717 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
AC060814.3-201ENST00000557717 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
AC060814.3-201ENST00000557717 NESP48681 1621 aa17.61■□□□□ 0.41
AC060814.3-201ENST00000557717 CUX2O14529 1486 aa17.55■□□□□ 0.4
AC060814.3-201ENST00000557717 DNAJC5Q9H3Z4 198 aa17.48■□□□□ 0.39
AC060814.3-201ENST00000557717 WIZO95785 1651 aa17.47■□□□□ 0.39
AC060814.3-201ENST00000557717 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
AC060814.3-201ENST00000557717 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
AC060814.3-201ENST00000557717 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
AC060814.3-201ENST00000557717 RSF1Q96T23 1441 aaPredicted RBP17.41■□□□□ 0.38
AC060814.3-201ENST00000557717 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
AC060814.3-201ENST00000557717 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
AC060814.3-201ENST00000557717 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
AC060814.3-201ENST00000557717 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
AC060814.3-201ENST00000557717 CFTRP13569 1480 aa17.21■□□□□ 0.35
AC060814.3-201ENST00000557717 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
AC060814.3-201ENST00000557717 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
AC060814.3-201ENST00000557717 WDR62O43379 1518 aa17.14■□□□□ 0.33
AC060814.3-201ENST00000557717 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
AC060814.3-201ENST00000557717 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
AC060814.3-201ENST00000557717 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
AC060814.3-201ENST00000557717 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
AC060814.3-201ENST00000557717 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
AC060814.3-201ENST00000557717 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
AC060814.3-201ENST00000557717 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
AC060814.3-201ENST00000557717 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
AC060814.3-201ENST00000557717 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
AC060814.3-201ENST00000557717 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
AC060814.3-201ENST00000557717 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
AC060814.3-201ENST00000557717 AQRO60306 1485 aaKnown RBP eCLIP16.71■□□□□ 0.27
AC060814.3-201ENST00000557717 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
AC060814.3-201ENST00000557717 SOGA1O94964 1423 aa16.69■□□□□ 0.26
AC060814.3-201ENST00000557717 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
AC060814.3-201ENST00000557717 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
AC060814.3-201ENST00000557717 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
AC060814.3-201ENST00000557717 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
AC060814.3-201ENST00000557717 FBLN2P98095 1184 aa16.64■□□□□ 0.25
AC060814.3-201ENST00000557717 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
AC060814.3-201ENST00000557717 CUX1P39880 1505 aa16.62■□□□□ 0.25
AC060814.3-201ENST00000557717 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.24
AC060814.3-201ENST00000557717 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
AC060814.3-201ENST00000557717 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
AC060814.3-201ENST00000557717 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
AC060814.3-201ENST00000557717 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
AC060814.3-201ENST00000557717 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
AC060814.3-201ENST00000557717 CHD1O14646 1710 aa16.49■□□□□ 0.23
AC060814.3-201ENST00000557717 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
AC060814.3-201ENST00000557717 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
AC060814.3-201ENST00000557717 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
AC060814.3-201ENST00000557717 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
AC060814.3-201ENST00000557717 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
AC060814.3-201ENST00000557717 ABCA10Q8WWZ4 1543 aa16.44■□□□□ 0.22
AC060814.3-201ENST00000557717 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
AC060814.3-201ENST00000557717 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
AC060814.3-201ENST00000557717 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
AC060814.3-201ENST00000557717 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
AC060814.3-201ENST00000557717 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
AC060814.3-201ENST00000557717 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
AC060814.3-201ENST00000557717 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
AC060814.3-201ENST00000557717 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
AC060814.3-201ENST00000557717 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
AC060814.3-201ENST00000557717 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
AC060814.3-201ENST00000557717 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
AC060814.3-201ENST00000557717 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
AC060814.3-201ENST00000557717 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
AC060814.3-201ENST00000557717 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
AC060814.3-201ENST00000557717 NUP160Q12769 1436 aa16.2■□□□□ 0.18
AC060814.3-201ENST00000557717 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
AC060814.3-201ENST00000557717 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
AC060814.3-201ENST00000557717 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
AC060814.3-201ENST00000557717 IGF1RP08069 1367 aa16.13■□□□□ 0.17
AC060814.3-201ENST00000557717 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
AC060814.3-201ENST00000557717 PRG4Q92954 1404 aaPredicted RBP16.08■□□□□ 0.16
AC060814.3-201ENST00000557717 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms