RNA–Protein interactions for RNA: ENST00000557609.5

LGMN-217, Transcript of legumain, humanhuman

TSL 5

Gene LGMN, Length 1,832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-217ENST00000557609 NISCHQ9Y2I1 1504 aa38.04■■■■□ 3.68
LGMN-217ENST00000557609 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
LGMN-217ENST00000557609 ZCCHC6Q5VYS8 1495 aaKnown RBP31.96■■■□□ 2.71
LGMN-217ENST00000557609 DCAF8L2P0C7V8 631 aa31.49■■■□□ 2.63
LGMN-217ENST00000557609 DCAF1Q9Y4B6 1507 aa31.42■■■□□ 2.62
LGMN-217ENST00000557609 ABCC9O60706 1549 aa31.33■■■□□ 2.61
LGMN-217ENST00000557609 SHROOM4Q9ULL8 1493 aa31.15■■■□□ 2.58
LGMN-217ENST00000557609 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
LGMN-217ENST00000557609 NACADO15069 1562 aa30.83■■■□□ 2.53
LGMN-217ENST00000557609 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.48
LGMN-217ENST00000557609 SCRIBQ14160 1630 aa30.5■■■□□ 2.47
LGMN-217ENST00000557609 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
LGMN-217ENST00000557609 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
LGMN-217ENST00000557609 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
LGMN-217ENST00000557609 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
LGMN-217ENST00000557609 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
LGMN-217ENST00000557609 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
LGMN-217ENST00000557609 MROH2BQ7Z745 1585 aa29.41■■■□□ 2.3
LGMN-217ENST00000557609 BAZ1AQ9NRL2 1556 aaPredicted RBP29.36■■■□□ 2.29
LGMN-217ENST00000557609 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
LGMN-217ENST00000557609 WIZO95785 1651 aa29.16■■■□□ 2.26
LGMN-217ENST00000557609 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
LGMN-217ENST00000557609 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
LGMN-217ENST00000557609 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
LGMN-217ENST00000557609 ATAD2BQ9ULI0 1458 aa28.75■■■□□ 2.19
LGMN-217ENST00000557609 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
LGMN-217ENST00000557609 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
LGMN-217ENST00000557609 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
LGMN-217ENST00000557609 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
LGMN-217ENST00000557609 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
LGMN-217ENST00000557609 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
LGMN-217ENST00000557609 CC2D2AQ9P2K1 1620 aa28.32■■■□□ 2.12
LGMN-217ENST00000557609 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
LGMN-217ENST00000557609 ABCC8Q09428 1581 aa28.01■■■□□ 2.07
LGMN-217ENST00000557609 CFTRP13569 1480 aa27.86■■■□□ 2.05
LGMN-217ENST00000557609 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
LGMN-217ENST00000557609 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
LGMN-217ENST00000557609 FAM9AQ8IZU1 332 aaPredicted RBP27.71■■■□□ 2.03
LGMN-217ENST00000557609 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
LGMN-217ENST00000557609 PRDM2Q13029 1718 aa27.66■■■□□ 2.02
LGMN-217ENST00000557609 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
LGMN-217ENST00000557609 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
LGMN-217ENST00000557609 TOP2BQ02880 1626 aa27.56■■■□□ 2
LGMN-217ENST00000557609 NESP48681 1621 aa27.52■■■□□ 2
LGMN-217ENST00000557609 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
LGMN-217ENST00000557609 SOGA1O94964 1423 aa27.5■■□□□ 1.99
LGMN-217ENST00000557609 CUX1P39880 1505 aa27.49■■□□□ 1.99
LGMN-217ENST00000557609 LAMC3Q9Y6N6 1575 aa27.49■■□□□ 1.99
LGMN-217ENST00000557609 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
LGMN-217ENST00000557609 EEA1Q15075 1411 aa27.43■■□□□ 1.98
LGMN-217ENST00000557609 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
LGMN-217ENST00000557609 EHMT2Q96KQ7 1210 aa27.34■■□□□ 1.97
LGMN-217ENST00000557609 CSRNP3Q8WYN3 585 aa27.32■■□□□ 1.96
LGMN-217ENST00000557609 PDS5BQ9NTI5 1447 aa27.3■■□□□ 1.96
LGMN-217ENST00000557609 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
LGMN-217ENST00000557609 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
LGMN-217ENST00000557609 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
LGMN-217ENST00000557609 TOPBP1Q92547 1522 aa27.17■■□□□ 1.94
LGMN-217ENST00000557609 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
LGMN-217ENST00000557609 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
LGMN-217ENST00000557609 KIF27Q86VH2 1401 aa27.11■■□□□ 1.93
LGMN-217ENST00000557609 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
LGMN-217ENST00000557609 KIF21BO75037 1637 aa27.06■■□□□ 1.92
LGMN-217ENST00000557609 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
LGMN-217ENST00000557609 CUX2O14529 1486 aa27.04■■□□□ 1.92
LGMN-217ENST00000557609 TNIKQ9UKE5 1360 aa27■■□□□ 1.91
LGMN-217ENST00000557609 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
LGMN-217ENST00000557609 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
LGMN-217ENST00000557609 MRC2Q9UBG0 1479 aa26.95■■□□□ 1.9
LGMN-217ENST00000557609 RAPGEF2Q9Y4G8 1499 aa26.93■■□□□ 1.9
LGMN-217ENST00000557609 ABCA10Q8WWZ4 1543 aa26.93■■□□□ 1.9
LGMN-217ENST00000557609 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
LGMN-217ENST00000557609 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
LGMN-217ENST00000557609 CEP162Q5TB80 1403 aa26.87■■□□□ 1.89
LGMN-217ENST00000557609 IGF1RP08069 1367 aa26.87■■□□□ 1.89
LGMN-217ENST00000557609 ERCC6Q03468 1493 aa26.86■■□□□ 1.89
LGMN-217ENST00000557609 WDR97A6NE52 1622 aa26.8■■□□□ 1.88
LGMN-217ENST00000557609 WDR62O43379 1518 aa26.78■■□□□ 1.88
LGMN-217ENST00000557609 CARMIL1Q5VZK9 1371 aa26.74■■□□□ 1.87
LGMN-217ENST00000557609 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
LGMN-217ENST00000557609 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
LGMN-217ENST00000557609 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
LGMN-217ENST00000557609 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
LGMN-217ENST00000557609 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
LGMN-217ENST00000557609 CLIP1P30622 1438 aa26.65■■□□□ 1.86
LGMN-217ENST00000557609 IFT140Q96RY7 1462 aa26.63■■□□□ 1.85
LGMN-217ENST00000557609 CUL7Q14999 1698 aa26.62■■□□□ 1.85
LGMN-217ENST00000557609 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.84
LGMN-217ENST00000557609 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.84
LGMN-217ENST00000557609 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
LGMN-217ENST00000557609 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
LGMN-217ENST00000557609 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
LGMN-217ENST00000557609 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
LGMN-217ENST00000557609 VPS8Q8N3P4 1428 aa26.42■■□□□ 1.82
LGMN-217ENST00000557609 TRIM26Q12899 539 aaPredicted RBP26.41■■□□□ 1.82
LGMN-217ENST00000557609 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
LGMN-217ENST00000557609 EIF4G3O43432 1585 aaKnown RBP26.38■■□□□ 1.81
LGMN-217ENST00000557609 PPARGC1BQ86YN6 1023 aaKnown RBP26.37■■□□□ 1.81
LGMN-217ENST00000557609 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
LGMN-217ENST00000557609 ARHGAP35Q9NRY4 1499 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms