RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
APEX1-220ENST00000557592 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
APEX1-220ENST00000557592 ABCC9O60706 1549 aa23.27■■□□□ 1.32
APEX1-220ENST00000557592 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
APEX1-220ENST00000557592 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
APEX1-220ENST00000557592 NACADO15069 1562 aa22.49■■□□□ 1.19
APEX1-220ENST00000557592 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
APEX1-220ENST00000557592 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
APEX1-220ENST00000557592 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
APEX1-220ENST00000557592 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
APEX1-220ENST00000557592 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
APEX1-220ENST00000557592 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
APEX1-220ENST00000557592 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
APEX1-220ENST00000557592 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
APEX1-220ENST00000557592 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
APEX1-220ENST00000557592 DNAJC5BQ9UF47 199 aa21.11■□□□□ 0.97
APEX1-220ENST00000557592 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
APEX1-220ENST00000557592 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
APEX1-220ENST00000557592 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
APEX1-220ENST00000557592 SMARCA4P51532 1647 aa21■□□□□ 0.95
APEX1-220ENST00000557592 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
APEX1-220ENST00000557592 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
APEX1-220ENST00000557592 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
APEX1-220ENST00000557592 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
APEX1-220ENST00000557592 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
APEX1-220ENST00000557592 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
APEX1-220ENST00000557592 WIZO95785 1651 aa20.7■□□□□ 0.91
APEX1-220ENST00000557592 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
APEX1-220ENST00000557592 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
APEX1-220ENST00000557592 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
APEX1-220ENST00000557592 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
APEX1-220ENST00000557592 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
APEX1-220ENST00000557592 NESP48681 1621 aa20.2■□□□□ 0.82
APEX1-220ENST00000557592 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
APEX1-220ENST00000557592 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
APEX1-220ENST00000557592 CFTRP13569 1480 aa20.08■□□□□ 0.81
APEX1-220ENST00000557592 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
APEX1-220ENST00000557592 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.8
APEX1-220ENST00000557592 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
APEX1-220ENST00000557592 KIF21AQ7Z4S6 1674 aa19.99■□□□□ 0.79
APEX1-220ENST00000557592 FANCD2Q9BXW9 1451 aa19.95■□□□□ 0.78
APEX1-220ENST00000557592 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
APEX1-220ENST00000557592 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
APEX1-220ENST00000557592 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
APEX1-220ENST00000557592 WDR62O43379 1518 aa19.73■□□□□ 0.75
APEX1-220ENST00000557592 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
APEX1-220ENST00000557592 CUX2O14529 1486 aa19.72■□□□□ 0.75
APEX1-220ENST00000557592 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
APEX1-220ENST00000557592 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
APEX1-220ENST00000557592 ABCC8Q09428 1581 aa19.65■□□□□ 0.74
APEX1-220ENST00000557592 CUX1P39880 1505 aa19.6■□□□□ 0.73
APEX1-220ENST00000557592 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.725e-6■■■■■ 29.2
APEX1-220ENST00000557592 SYNJ1O43426 1573 aa19.51■□□□□ 0.71
APEX1-220ENST00000557592 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
APEX1-220ENST00000557592 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
APEX1-220ENST00000557592 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
APEX1-220ENST00000557592 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
APEX1-220ENST00000557592 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
APEX1-220ENST00000557592 SOGA1O94964 1423 aa19.42■□□□□ 0.7
APEX1-220ENST00000557592 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
APEX1-220ENST00000557592 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
APEX1-220ENST00000557592 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
APEX1-220ENST00000557592 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
APEX1-220ENST00000557592 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
APEX1-220ENST00000557592 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
APEX1-220ENST00000557592 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
APEX1-220ENST00000557592 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.683e-9■■■□□ 17.9
APEX1-220ENST00000557592 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
APEX1-220ENST00000557592 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
APEX1-220ENST00000557592 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
APEX1-220ENST00000557592 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
APEX1-220ENST00000557592 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
APEX1-220ENST00000557592 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
APEX1-220ENST00000557592 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
APEX1-220ENST00000557592 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
APEX1-220ENST00000557592 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
APEX1-220ENST00000557592 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
APEX1-220ENST00000557592 CHD1O14646 1710 aa19.04■□□□□ 0.64
APEX1-220ENST00000557592 FBLN2P98095 1184 aa19.04■□□□□ 0.64
APEX1-220ENST00000557592 RUSC2Q8N2Y8 1516 aa19.04■□□□□ 0.64
APEX1-220ENST00000557592 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
APEX1-220ENST00000557592 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
APEX1-220ENST00000557592 IGF1RP08069 1367 aa19.01■□□□□ 0.63
APEX1-220ENST00000557592 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
APEX1-220ENST00000557592 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
APEX1-220ENST00000557592 CUL7Q14999 1698 aa18.97■□□□□ 0.63
APEX1-220ENST00000557592 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
APEX1-220ENST00000557592 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
APEX1-220ENST00000557592 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
APEX1-220ENST00000557592 EEA1Q15075 1411 aa18.91■□□□□ 0.62
APEX1-220ENST00000557592 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
APEX1-220ENST00000557592 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
APEX1-220ENST00000557592 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
APEX1-220ENST00000557592 RAPGEF2Q9Y4G8 1499 aa18.84■□□□□ 0.61
APEX1-220ENST00000557592 CEP170Q5SW79 1584 aa18.83■□□□□ 0.6
APEX1-220ENST00000557592 NUP160Q12769 1436 aa18.82■□□□□ 0.6
APEX1-220ENST00000557592 PRXQ9BXM0 1461 aa18.81■□□□□ 0.6
APEX1-220ENST00000557592 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
APEX1-220ENST00000557592 KIF21BO75037 1637 aa18.72■□□□□ 0.59
APEX1-220ENST00000557592 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms