RNA–Protein interactions for RNA: ENST00000557474.1

AC048337.1-201, humanhuman

TSL 4 BASIC

Gene AC048337.1, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048337.1-201ENST00000557474 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.3
AC048337.1-201ENST00000557474 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
AC048337.1-201ENST00000557474 ABCC9O60706 1549 aa20.54■□□□□ 0.88
AC048337.1-201ENST00000557474 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
AC048337.1-201ENST00000557474 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
AC048337.1-201ENST00000557474 NACADO15069 1562 aa19.4■□□□□ 0.7
AC048337.1-201ENST00000557474 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
AC048337.1-201ENST00000557474 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
AC048337.1-201ENST00000557474 MYO15BQ96JP2 1530 aa19.13■□□□□ 0.65
AC048337.1-201ENST00000557474 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
AC048337.1-201ENST00000557474 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
AC048337.1-201ENST00000557474 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
AC048337.1-201ENST00000557474 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
AC048337.1-201ENST00000557474 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
AC048337.1-201ENST00000557474 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
AC048337.1-201ENST00000557474 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
AC048337.1-201ENST00000557474 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
AC048337.1-201ENST00000557474 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
AC048337.1-201ENST00000557474 SMARCA4P51532 1647 aa18■□□□□ 0.47
AC048337.1-201ENST00000557474 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
AC048337.1-201ENST00000557474 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
AC048337.1-201ENST00000557474 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
AC048337.1-201ENST00000557474 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
AC048337.1-201ENST00000557474 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
AC048337.1-201ENST00000557474 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
AC048337.1-201ENST00000557474 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
AC048337.1-201ENST00000557474 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
AC048337.1-201ENST00000557474 NESP48681 1621 aa17.73■□□□□ 0.43
AC048337.1-201ENST00000557474 WIZO95785 1651 aa17.71■□□□□ 0.43
AC048337.1-201ENST00000557474 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
AC048337.1-201ENST00000557474 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
AC048337.1-201ENST00000557474 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
AC048337.1-201ENST00000557474 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
AC048337.1-201ENST00000557474 CUX2O14529 1486 aa17.44■□□□□ 0.38
AC048337.1-201ENST00000557474 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
AC048337.1-201ENST00000557474 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
AC048337.1-201ENST00000557474 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.38
AC048337.1-201ENST00000557474 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
AC048337.1-201ENST00000557474 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
AC048337.1-201ENST00000557474 CFTRP13569 1480 aa17.28■□□□□ 0.36
AC048337.1-201ENST00000557474 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
AC048337.1-201ENST00000557474 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
AC048337.1-201ENST00000557474 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
AC048337.1-201ENST00000557474 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
AC048337.1-201ENST00000557474 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
AC048337.1-201ENST00000557474 WDR62O43379 1518 aa17.17■□□□□ 0.34
AC048337.1-201ENST00000557474 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
AC048337.1-201ENST00000557474 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
AC048337.1-201ENST00000557474 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
AC048337.1-201ENST00000557474 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
AC048337.1-201ENST00000557474 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
AC048337.1-201ENST00000557474 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
AC048337.1-201ENST00000557474 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
AC048337.1-201ENST00000557474 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
AC048337.1-201ENST00000557474 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
AC048337.1-201ENST00000557474 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
AC048337.1-201ENST00000557474 CUX1P39880 1505 aa16.79■□□□□ 0.28
AC048337.1-201ENST00000557474 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
AC048337.1-201ENST00000557474 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
AC048337.1-201ENST00000557474 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
AC048337.1-201ENST00000557474 SOGA1O94964 1423 aa16.77■□□□□ 0.27
AC048337.1-201ENST00000557474 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.27
AC048337.1-201ENST00000557474 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
AC048337.1-201ENST00000557474 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
AC048337.1-201ENST00000557474 FBLN2P98095 1184 aa16.71■□□□□ 0.27
AC048337.1-201ENST00000557474 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
AC048337.1-201ENST00000557474 CHD1O14646 1710 aa16.6■□□□□ 0.25
AC048337.1-201ENST00000557474 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
AC048337.1-201ENST00000557474 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
AC048337.1-201ENST00000557474 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
AC048337.1-201ENST00000557474 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
AC048337.1-201ENST00000557474 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
AC048337.1-201ENST00000557474 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
AC048337.1-201ENST00000557474 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.24
AC048337.1-201ENST00000557474 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.24
AC048337.1-201ENST00000557474 TOP2BQ02880 1626 aa16.52■□□□□ 0.24
AC048337.1-201ENST00000557474 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.24
AC048337.1-201ENST00000557474 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
AC048337.1-201ENST00000557474 BIVM-ERCC5R4GMW8 1640 aa16.51■□□□□ 0.23
AC048337.1-201ENST00000557474 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
AC048337.1-201ENST00000557474 PBRM1Q86U86 1689 aa16.49■□□□□ 0.23
AC048337.1-201ENST00000557474 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
AC048337.1-201ENST00000557474 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
AC048337.1-201ENST00000557474 CYB5RLQ6IPT4 315 aa16.46■□□□□ 0.23
AC048337.1-201ENST00000557474 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
AC048337.1-201ENST00000557474 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
AC048337.1-201ENST00000557474 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
AC048337.1-201ENST00000557474 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
AC048337.1-201ENST00000557474 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
AC048337.1-201ENST00000557474 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
AC048337.1-201ENST00000557474 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
AC048337.1-201ENST00000557474 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
AC048337.1-201ENST00000557474 ERCC6L2Q5T890 1561 aa16.27■□□□□ 0.2
AC048337.1-201ENST00000557474 NUP160Q12769 1436 aa16.25■□□□□ 0.19
AC048337.1-201ENST00000557474 IGF1RP08069 1367 aa16.24■□□□□ 0.19
AC048337.1-201ENST00000557474 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
AC048337.1-201ENST00000557474 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
AC048337.1-201ENST00000557474 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
AC048337.1-201ENST00000557474 JPH4Q96JJ6 628 aa16.16■□□□□ 0.18
AC048337.1-201ENST00000557474 PRG4Q92954 1404 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms