RNA–Protein interactions for RNA: ENST00000557150.5

APEX1-215, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-215ENST00000557150 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
APEX1-215ENST00000557150 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
APEX1-215ENST00000557150 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
APEX1-215ENST00000557150 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
APEX1-215ENST00000557150 ABCC9O60706 1549 aa22.78■■□□□ 1.24
APEX1-215ENST00000557150 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
APEX1-215ENST00000557150 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
APEX1-215ENST00000557150 NACADO15069 1562 aa22.54■■□□□ 1.2
APEX1-215ENST00000557150 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
APEX1-215ENST00000557150 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
APEX1-215ENST00000557150 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
APEX1-215ENST00000557150 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.09
APEX1-215ENST00000557150 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
APEX1-215ENST00000557150 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
APEX1-215ENST00000557150 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
APEX1-215ENST00000557150 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
APEX1-215ENST00000557150 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.02
APEX1-215ENST00000557150 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
APEX1-215ENST00000557150 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
APEX1-215ENST00000557150 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
APEX1-215ENST00000557150 SMARCA4P51532 1647 aa21.29■■□□□ 1
APEX1-215ENST00000557150 WIZO95785 1651 aa21.19■□□□□ 0.98
APEX1-215ENST00000557150 PEG3Q9GZU2 1588 aa21.08■□□□□ 0.97
APEX1-215ENST00000557150 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
APEX1-215ENST00000557150 EIF4G1Q04637 1599 aaKnown RBP20.97■□□□□ 0.95
APEX1-215ENST00000557150 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
APEX1-215ENST00000557150 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
APEX1-215ENST00000557150 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
APEX1-215ENST00000557150 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
APEX1-215ENST00000557150 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
APEX1-215ENST00000557150 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
APEX1-215ENST00000557150 HMGXB3Q12766 1538 aa20.77■□□□□ 0.92
APEX1-215ENST00000557150 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.9
APEX1-215ENST00000557150 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
APEX1-215ENST00000557150 CFTRP13569 1480 aa20.31■□□□□ 0.84
APEX1-215ENST00000557150 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
APEX1-215ENST00000557150 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.84
APEX1-215ENST00000557150 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
APEX1-215ENST00000557150 PRDM2Q13029 1718 aa20.23■□□□□ 0.83
APEX1-215ENST00000557150 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.835e-6■■■■■ 29.2
APEX1-215ENST00000557150 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
APEX1-215ENST00000557150 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
APEX1-215ENST00000557150 TOP2BQ02880 1626 aa20.08■□□□□ 0.8
APEX1-215ENST00000557150 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
APEX1-215ENST00000557150 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
APEX1-215ENST00000557150 EEA1Q15075 1411 aa20■□□□□ 0.79
APEX1-215ENST00000557150 NESP48681 1621 aa19.99■□□□□ 0.79
APEX1-215ENST00000557150 CUX1P39880 1505 aa19.99■□□□□ 0.79
APEX1-215ENST00000557150 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
APEX1-215ENST00000557150 SOGA1O94964 1423 aa19.93■□□□□ 0.78
APEX1-215ENST00000557150 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
APEX1-215ENST00000557150 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
APEX1-215ENST00000557150 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
APEX1-215ENST00000557150 DNMBPQ6XZF7 1577 aa19.85■□□□□ 0.77
APEX1-215ENST00000557150 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
APEX1-215ENST00000557150 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
APEX1-215ENST00000557150 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
APEX1-215ENST00000557150 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
APEX1-215ENST00000557150 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
APEX1-215ENST00000557150 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
APEX1-215ENST00000557150 KIF27Q86VH2 1401 aa19.73■□□□□ 0.75
APEX1-215ENST00000557150 KIF21BO75037 1637 aa19.71■□□□□ 0.75
APEX1-215ENST00000557150 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
APEX1-215ENST00000557150 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
APEX1-215ENST00000557150 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
APEX1-215ENST00000557150 CUX2O14529 1486 aa19.65■□□□□ 0.74
APEX1-215ENST00000557150 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
APEX1-215ENST00000557150 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
APEX1-215ENST00000557150 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
APEX1-215ENST00000557150 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
APEX1-215ENST00000557150 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
APEX1-215ENST00000557150 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
APEX1-215ENST00000557150 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
APEX1-215ENST00000557150 WDR62O43379 1518 aa19.56■□□□□ 0.72
APEX1-215ENST00000557150 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
APEX1-215ENST00000557150 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
APEX1-215ENST00000557150 UBTFP17480 764 aaKnown RBP19.53■□□□□ 0.72
APEX1-215ENST00000557150 IGF1RP08069 1367 aa19.53■□□□□ 0.72
APEX1-215ENST00000557150 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
APEX1-215ENST00000557150 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
APEX1-215ENST00000557150 CEP162Q5TB80 1403 aa19.48■□□□□ 0.71
APEX1-215ENST00000557150 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
APEX1-215ENST00000557150 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
APEX1-215ENST00000557150 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
APEX1-215ENST00000557150 CUL7Q14999 1698 aa19.43■□□□□ 0.7
APEX1-215ENST00000557150 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
APEX1-215ENST00000557150 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
APEX1-215ENST00000557150 CLIP1P30622 1438 aa19.34■□□□□ 0.69
APEX1-215ENST00000557150 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
APEX1-215ENST00000557150 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
APEX1-215ENST00000557150 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.673e-9■■■□□ 17.9
APEX1-215ENST00000557150 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
APEX1-215ENST00000557150 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
APEX1-215ENST00000557150 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
APEX1-215ENST00000557150 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
APEX1-215ENST00000557150 CTTNBP2Q8WZ74 1663 aa19.19■□□□□ 0.66
APEX1-215ENST00000557150 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
APEX1-215ENST00000557150 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
APEX1-215ENST00000557150 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
APEX1-215ENST00000557150 RANGAP1P46060 587 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms