RNA–Protein interactions for RNA: ENST00000557140.5

NFKBIA-208, Transcript of NFKB inhibitor alpha, humanhuman

TSL 5 BASIC

Gene NFKBIA, Length 1,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-208ENST00000557140 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.88□□□□□ -0.672e-63■■■■■ 470.3
NFKBIA-208ENST00000557140 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.271e-41■■■■□ 23.7
NFKBIA-208ENST00000557140 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.94□□□□□ -0.666e-26■■■■■ 112.1
NFKBIA-208ENST00000557140 SRSF1Q07955 248 aaKnown RBP eCLIP11.52□□□□□ -0.571e-24■■■■□ 21.2
NFKBIA-208ENST00000557140 DDX3XO00571 662 aaKnown RBP eCLIP12.2□□□□□ -0.463e-18■■■■■ 39.9
NFKBIA-208ENST00000557140 FUBP3Q96I24 572 aaKnown RBP eCLIP12.94□□□□□ -0.343e-18■■■■■ 61.7
NFKBIA-208ENST00000557140 PABPC4Q13310 644 aaKnown RBP eCLIP14.7□□□□□ -0.064e-16■■■■■ 41.2
NFKBIA-208ENST00000557140 PPIGQ13427 754 aaKnown RBP eCLIP14.09□□□□□ -0.152e-14■□□□□ 10.5
NFKBIA-208ENST00000557140 RPS3P23396 243 aaKnown RBP eCLIP11.62□□□□□ -0.556e-12■■□□□ 12.5
NFKBIA-208ENST00000557140 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.741e-11■■■■□ 23.4
NFKBIA-208ENST00000557140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.22□□□□□ -0.292e-11■□□□□ 9.3
NFKBIA-208ENST00000557140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.74■□□□□ 0.752e-9■■■■□ 23.9
NFKBIA-208ENST00000557140 U2AF1Q01081 240 aaKnown RBP eCLIP16.17■□□□□ 0.182e-9■■■■□ 20.8
NFKBIA-208ENST00000557140 EFTUD2Q15029 972 aaKnown RBP eCLIP11.29□□□□□ -0.66e-9■■■■■ 31.9
NFKBIA-208ENST00000557140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.351e-8■■■■■ 313.1
NFKBIA-208ENST00000557140 YBX3P16989 372 aaKnown RBP eCLIP16.23■□□□□ 0.192e-8■□□□□ 10.8
NFKBIA-208ENST00000557140 PCBP2Q15366 365 aaKnown RBP eCLIP11.19□□□□□ -0.622e-8■■□□□ 12.8
NFKBIA-208ENST00000557140 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.245e-8■□□□□ 10.2
NFKBIA-208ENST00000557140 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.06□□□□□ -0.165e-8■■■□□ 15.9
NFKBIA-208ENST00000557140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.93□□□□□ -0.028e-8■□□□□ 9.1
NFKBIA-208ENST00000557140 SF3A3Q12874 501 aaKnown RBP eCLIP10.88□□□□□ -0.678e-8■■■■■ 28.1
NFKBIA-208ENST00000557140 PRPF4O43172 522 aaKnown RBP eCLIP11.55□□□□□ -0.561e-7■■■□□ 15.1
NFKBIA-208ENST00000557140 SF3B1O75533 1304 aaKnown RBP eCLIP13.32□□□□□ -0.281e-7■■■■■ 31.2
NFKBIA-208ENST00000557140 SF3B4Q15427 424 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■■■■■ 35.9
NFKBIA-208ENST00000557140 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.53□□□□□ -0.082e-7■■■■■ 26.8
NFKBIA-208ENST00000557140 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.063e-7■■■■□ 23.9
NFKBIA-208ENST00000557140 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.35□□□□□ -0.593e-7■■■■□ 21.9
NFKBIA-208ENST00000557140 NKRFO15226 690 aaKnown RBP eCLIP14.07□□□□□ -0.164e-7■□□□□ 9.1
NFKBIA-208ENST00000557140 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.185e-7■■■□□ 17.4
NFKBIA-208ENST00000557140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.595e-7■□□□□ 10.7
NFKBIA-208ENST00000557140 DDX6P26196 483 aaKnown RBP eCLIP12.96□□□□□ -0.341e-6■■■□□ 17.5
NFKBIA-208ENST00000557140 SMNDC1O75940 238 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■■■□ 20.5
NFKBIA-208ENST00000557140 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.34□□□□□ -0.592e-6■■□□□ 12.7
NFKBIA-208ENST00000557140 RBM22Q9NW64 420 aaKnown RBP eCLIP12.08□□□□□ -0.483e-6■□□□□ 10.7
NFKBIA-208ENST00000557140 CDC40O60508 579 aaKnown RBP eCLIP11.27□□□□□ -0.63e-6■□□□□ 9.5
NFKBIA-208ENST00000557140 TRA2AQ13595 282 aaKnown RBP eCLIP11.96□□□□□ -0.493e-6■■■■□ 20
NFKBIA-208ENST00000557140 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.143e-6■□□□□ 11.1
NFKBIA-208ENST00000557140 RBFOX2O43251 390 aaKnown RBP eCLIP9.18□□□□□ -0.944e-6■□□□□ 9.2
NFKBIA-208ENST00000557140 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.116e-6■■■□□ 14.6
NFKBIA-208ENST00000557140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.78□□□□□ -0.27e-6■□□□□ 9
Retrieved 40 of 40 RNA–protein pairs in 20 ms