RNA–Protein interactions for RNA: ENST00000557015.1

PRMT5-224, Transcript of protein arginine methyltransferase 5, humanhuman

TSL 2

Gene PRMT5, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRMT5-224ENST00000557015 NISCHQ9Y2I1 1504 aa48■■■■■ 5.27
PRMT5-224ENST00000557015 CCDC180Q9P1Z9 1646 aa42.71■■■■■ 4.43
PRMT5-224ENST00000557015 ABCC9O60706 1549 aa41.76■■■■■ 4.28
PRMT5-224ENST00000557015 RB1CC1Q8TDY2 1594 aa40.18■■■■■ 4.02
PRMT5-224ENST00000557015 NACADO15069 1562 aa40.14■■■■■ 4.02
PRMT5-224ENST00000557015 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
PRMT5-224ENST00000557015 DCAF8L2P0C7V8 631 aa39.96■■■■□ 3.99
PRMT5-224ENST00000557015 MYO15BQ96JP2 1530 aa39.93■■■■□ 3.98
PRMT5-224ENST00000557015 DCAF1Q9Y4B6 1507 aa39.75■■■■□ 3.95
PRMT5-224ENST00000557015 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
PRMT5-224ENST00000557015 BICRAQ9NZM4 1560 aa39.01■■■■□ 3.84
PRMT5-224ENST00000557015 PABPN1Q86U42 306 aaKnown RBP eCLIP38.98■■■■□ 3.83
PRMT5-224ENST00000557015 SCRIBQ14160 1630 aa38.92■■■■□ 3.82
PRMT5-224ENST00000557015 SHROOM4Q9ULL8 1493 aa38.6■■■■□ 3.77
PRMT5-224ENST00000557015 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
PRMT5-224ENST00000557015 EIF4G1Q04637 1599 aaKnown RBP37.95■■■■□ 3.67
PRMT5-224ENST00000557015 CC2D2AQ9P2K1 1620 aa37.79■■■■□ 3.64
PRMT5-224ENST00000557015 CECR2Q9BXF3 1484 aa37.53■■■■□ 3.6
PRMT5-224ENST00000557015 SMARCA4P51532 1647 aa37.25■■■■□ 3.55
PRMT5-224ENST00000557015 BAZ1AQ9NRL2 1556 aaPredicted RBP37.19■■■■□ 3.54
PRMT5-224ENST00000557015 ATAD2BQ9ULI0 1458 aa37.06■■■■□ 3.52
PRMT5-224ENST00000557015 NCAPD3P42695 1498 aa37.05■■■■□ 3.52
PRMT5-224ENST00000557015 SMARCA2P51531 1590 aa37■■■■□ 3.51
PRMT5-224ENST00000557015 MROH2BQ7Z745 1585 aa37■■■■□ 3.51
PRMT5-224ENST00000557015 PEG3Q9GZU2 1588 aa36.92■■■■□ 3.5
PRMT5-224ENST00000557015 HMGXB3Q12766 1538 aa36.88■■■■□ 3.49
PRMT5-224ENST00000557015 BAZ1BQ9UIG0 1483 aaKnown RBP36.73■■■■□ 3.47
PRMT5-224ENST00000557015 WIZO95785 1651 aa36.57■■■■□ 3.44
PRMT5-224ENST00000557015 RSF1Q96T23 1441 aaPredicted RBP36.55■■■■□ 3.44
PRMT5-224ENST00000557015 TOP2AP11388 1531 aaKnown RBP36.2■■■■□ 3.39
PRMT5-224ENST00000557015 NESP48681 1621 aa36.15■■■■□ 3.38
PRMT5-224ENST00000557015 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
PRMT5-224ENST00000557015 ERCC6Q03468 1493 aa35.98■■■■□ 3.35
PRMT5-224ENST00000557015 CADPSQ9ULU8 1353 aa35.94■■■■□ 3.34
PRMT5-224ENST00000557015 PDS5BQ9NTI5 1447 aa35.79■■■■□ 3.32
PRMT5-224ENST00000557015 CCDC88BA6NC98 1476 aa35.75■■■■□ 3.31
PRMT5-224ENST00000557015 CFTRP13569 1480 aa35.74■■■■□ 3.31
PRMT5-224ENST00000557015 KIF21AQ7Z4S6 1674 aa35.72■■■■□ 3.31
PRMT5-224ENST00000557015 CUX2O14529 1486 aa35.66■■■■□ 3.3
PRMT5-224ENST00000557015 THOC2Q8NI27 1593 aaKnown RBP35.65■■■■□ 3.3
PRMT5-224ENST00000557015 FANCD2Q9BXW9 1451 aa35.53■■■■□ 3.28
PRMT5-224ENST00000557015 CEP164Q9UPV0 1460 aa35.49■■■■□ 3.27
PRMT5-224ENST00000557015 SUPT5HO00267 1087 aaKnown RBP35.48■■■■□ 3.27
PRMT5-224ENST00000557015 PRDM2Q13029 1718 aa35.47■■■■□ 3.27
PRMT5-224ENST00000557015 MRC2Q9UBG0 1479 aa35.46■■■■□ 3.27
PRMT5-224ENST00000557015 WDR62O43379 1518 aa35.37■■■■□ 3.25
PRMT5-224ENST00000557015 URB2Q14146 1524 aaKnown RBP35.21■■■■□ 3.23
PRMT5-224ENST00000557015 TOPBP1Q92547 1522 aa34.97■■■■□ 3.19
PRMT5-224ENST00000557015 ABCC8Q09428 1581 aa34.95■■■■□ 3.18
PRMT5-224ENST00000557015 DNMBPQ6XZF7 1577 aa34.93■■■■□ 3.18
PRMT5-224ENST00000557015 IFT140Q96RY7 1462 aa34.75■■■■□ 3.15
PRMT5-224ENST00000557015 CUX1P39880 1505 aa34.71■■■■□ 3.15
PRMT5-224ENST00000557015 POLA1P09884 1462 aaPredicted RBP34.67■■■■□ 3.14
PRMT5-224ENST00000557015 TARBP1Q13395 1621 aaKnown RBP34.61■■■■□ 3.13
PRMT5-224ENST00000557015 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
PRMT5-224ENST00000557015 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
PRMT5-224ENST00000557015 DNAJC5Q9H3Z4 198 aa34.57■■■■□ 3.12
PRMT5-224ENST00000557015 RAD54L2Q9Y4B4 1467 aa34.51■■■■□ 3.11
PRMT5-224ENST00000557015 SOGA1O94964 1423 aa34.49■■■■□ 3.11
PRMT5-224ENST00000557015 EIF4G3O43432 1585 aaKnown RBP34.48■■■■□ 3.11
PRMT5-224ENST00000557015 WRNQ14191 1432 aaPredicted RBP eCLIP34.44■■■■□ 3.1
PRMT5-224ENST00000557015 BIVM-ERCC5R4GMW8 1640 aa34.41■■■■□ 3.1
PRMT5-224ENST00000557015 TOP2BQ02880 1626 aa34.39■■■■□ 3.1
PRMT5-224ENST00000557015 SYNJ1O43426 1573 aa34.39■■■■□ 3.1
PRMT5-224ENST00000557015 AQRO60306 1485 aaKnown RBP eCLIP34.38■■■■□ 3.095e-6■■■□□ 17
PRMT5-224ENST00000557015 WDR97A6NE52 1622 aa34.33■■■■□ 3.09
PRMT5-224ENST00000557015 TDRD9Q8NDG6 1382 aaKnown RBP34.3■■■■□ 3.08
PRMT5-224ENST00000557015 ABCA10Q8WWZ4 1543 aa34.26■■■■□ 3.08
PRMT5-224ENST00000557015 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
PRMT5-224ENST00000557015 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
PRMT5-224ENST00000557015 OSCARQ8IYS5 282 aa34.11■■■■□ 3.05
PRMT5-224ENST00000557015 GAPVD1Q14C86 1478 aa34.11■■■■□ 3.05
PRMT5-224ENST00000557015 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
PRMT5-224ENST00000557015 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
PRMT5-224ENST00000557015 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
PRMT5-224ENST00000557015 CHD1O14646 1710 aa34.04■■■■□ 3.04
PRMT5-224ENST00000557015 SYNJ2O15056 1496 aa33.9■■■■□ 3.02
PRMT5-224ENST00000557015 FBLN2P98095 1184 aa33.89■■■■□ 3.02
PRMT5-224ENST00000557015 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
PRMT5-224ENST00000557015 CHMP7Q8WUX9 453 aaPredicted RBP33.82■■■■□ 3
PRMT5-224ENST00000557015 ADAMTS12P58397 1594 aa33.81■■■■□ 3
PRMT5-224ENST00000557015 FHAD1B1AJZ9 1412 aa33.72■■■□□ 2.99
PRMT5-224ENST00000557015 KIF27Q86VH2 1401 aa33.71■■■□□ 2.99
PRMT5-224ENST00000557015 CLASP1Q7Z460 1538 aa33.7■■■□□ 2.99
PRMT5-224ENST00000557015 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
PRMT5-224ENST00000557015 RIMBP3CA6NJZ7 1639 aa33.62■■■□□ 2.97
PRMT5-224ENST00000557015 RIMBP3BA6NNM3 1639 aa33.62■■■□□ 2.97
PRMT5-224ENST00000557015 RIMBP3Q9UFD9 1639 aa33.62■■■□□ 2.97
PRMT5-224ENST00000557015 ARHGEF11O15085 1522 aa33.62■■■□□ 2.97
PRMT5-224ENST00000557015 IGF1RP08069 1367 aa33.6■■■□□ 2.97
PRMT5-224ENST00000557015 NUP160Q12769 1436 aa33.57■■■□□ 2.96
PRMT5-224ENST00000557015 CEP170Q5SW79 1584 aa33.54■■■□□ 2.96
PRMT5-224ENST00000557015 CUL7Q14999 1698 aa33.52■■■□□ 2.96
PRMT5-224ENST00000557015 TRIM41Q8WV44 630 aa33.52■■■□□ 2.96
PRMT5-224ENST00000557015 RUSC2Q8N2Y8 1516 aa33.41■■■□□ 2.94
PRMT5-224ENST00000557015 CARMIL1Q5VZK9 1371 aa33.38■■■□□ 2.93
PRMT5-224ENST00000557015 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
PRMT5-224ENST00000557015 SHROOM2Q13796 1616 aa33.32■■■□□ 2.92
PRMT5-224ENST00000557015 CYB5RLQ6IPT4 315 aa33.23■■■□□ 2.91
PRMT5-224ENST00000557015 ERCC6L2Q5T890 1561 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms