RNA–Protein interactions for RNA: ENST00000556998.1

AL139317.2-201, humanhuman

BASIC

Gene AL139317.2, Length 158 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139317.2-201ENST00000556998 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
AL139317.2-201ENST00000556998 ABCC9O60706 1549 aa28.05■■■□□ 2.08
AL139317.2-201ENST00000556998 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
AL139317.2-201ENST00000556998 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
AL139317.2-201ENST00000556998 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
AL139317.2-201ENST00000556998 NACADO15069 1562 aa26.36■■□□□ 1.81
AL139317.2-201ENST00000556998 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
AL139317.2-201ENST00000556998 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
AL139317.2-201ENST00000556998 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
AL139317.2-201ENST00000556998 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
AL139317.2-201ENST00000556998 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
AL139317.2-201ENST00000556998 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
AL139317.2-201ENST00000556998 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
AL139317.2-201ENST00000556998 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
AL139317.2-201ENST00000556998 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
AL139317.2-201ENST00000556998 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
AL139317.2-201ENST00000556998 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
AL139317.2-201ENST00000556998 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
AL139317.2-201ENST00000556998 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
AL139317.2-201ENST00000556998 CUX2O14529 1486 aa24.43■■□□□ 1.5
AL139317.2-201ENST00000556998 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
AL139317.2-201ENST00000556998 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
AL139317.2-201ENST00000556998 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
AL139317.2-201ENST00000556998 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
AL139317.2-201ENST00000556998 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
AL139317.2-201ENST00000556998 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
AL139317.2-201ENST00000556998 NESP48681 1621 aa23.98■■□□□ 1.43
AL139317.2-201ENST00000556998 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
AL139317.2-201ENST00000556998 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
AL139317.2-201ENST00000556998 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
AL139317.2-201ENST00000556998 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
AL139317.2-201ENST00000556998 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
AL139317.2-201ENST00000556998 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
AL139317.2-201ENST00000556998 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
AL139317.2-201ENST00000556998 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.38
AL139317.2-201ENST00000556998 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
AL139317.2-201ENST00000556998 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
AL139317.2-201ENST00000556998 WDR62O43379 1518 aa23.49■■□□□ 1.35
AL139317.2-201ENST00000556998 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
AL139317.2-201ENST00000556998 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
AL139317.2-201ENST00000556998 WIZO95785 1651 aa23.3■■□□□ 1.32
AL139317.2-201ENST00000556998 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
AL139317.2-201ENST00000556998 CFTRP13569 1480 aa23.23■■□□□ 1.31
AL139317.2-201ENST00000556998 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
AL139317.2-201ENST00000556998 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
AL139317.2-201ENST00000556998 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
AL139317.2-201ENST00000556998 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
AL139317.2-201ENST00000556998 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
AL139317.2-201ENST00000556998 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
AL139317.2-201ENST00000556998 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
AL139317.2-201ENST00000556998 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
AL139317.2-201ENST00000556998 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
AL139317.2-201ENST00000556998 ZNF608Q9ULD9 1512 aaPredicted RBP22.85■■□□□ 1.25
AL139317.2-201ENST00000556998 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
AL139317.2-201ENST00000556998 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
AL139317.2-201ENST00000556998 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
AL139317.2-201ENST00000556998 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
AL139317.2-201ENST00000556998 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
AL139317.2-201ENST00000556998 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
AL139317.2-201ENST00000556998 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
AL139317.2-201ENST00000556998 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
AL139317.2-201ENST00000556998 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
AL139317.2-201ENST00000556998 CHD1O14646 1710 aa22.57■■□□□ 1.2
AL139317.2-201ENST00000556998 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
AL139317.2-201ENST00000556998 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
AL139317.2-201ENST00000556998 TRHP20396 242 aaPredicted RBP22.49■■□□□ 1.19
AL139317.2-201ENST00000556998 FBLN2P98095 1184 aa22.48■■□□□ 1.19
AL139317.2-201ENST00000556998 WDR97A6NE52 1622 aa22.44■■□□□ 1.18
AL139317.2-201ENST00000556998 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
AL139317.2-201ENST00000556998 SOGA1O94964 1423 aa22.41■■□□□ 1.18
AL139317.2-201ENST00000556998 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.18
AL139317.2-201ENST00000556998 CLASP1Q7Z460 1538 aa22.39■■□□□ 1.17
AL139317.2-201ENST00000556998 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
AL139317.2-201ENST00000556998 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
AL139317.2-201ENST00000556998 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
AL139317.2-201ENST00000556998 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
AL139317.2-201ENST00000556998 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
AL139317.2-201ENST00000556998 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
AL139317.2-201ENST00000556998 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
AL139317.2-201ENST00000556998 CUX1P39880 1505 aa22.24■■□□□ 1.15
AL139317.2-201ENST00000556998 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
AL139317.2-201ENST00000556998 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
AL139317.2-201ENST00000556998 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
AL139317.2-201ENST00000556998 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
AL139317.2-201ENST00000556998 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
AL139317.2-201ENST00000556998 GRIN2AQ12879 1464 aa22■■□□□ 1.11
AL139317.2-201ENST00000556998 NUP160Q12769 1436 aa21.97■■□□□ 1.11
AL139317.2-201ENST00000556998 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
AL139317.2-201ENST00000556998 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
AL139317.2-201ENST00000556998 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
AL139317.2-201ENST00000556998 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
AL139317.2-201ENST00000556998 SHROOM2Q13796 1616 aa21.89■■□□□ 1.09
AL139317.2-201ENST00000556998 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
AL139317.2-201ENST00000556998 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
AL139317.2-201ENST00000556998 TOP2BQ02880 1626 aa21.81■■□□□ 1.08
AL139317.2-201ENST00000556998 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
AL139317.2-201ENST00000556998 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
AL139317.2-201ENST00000556998 KIF13AQ9H1H9 1805 aa21.72■■□□□ 1.07
AL139317.2-201ENST00000556998 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
AL139317.2-201ENST00000556998 ABCC10Q5T3U5 1492 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms