RNA–Protein interactions for RNA: ENST00000556986.1

KLC1-221, Transcript of kinesin light chain 1, humanhuman

TSL 1 (best)

Gene KLC1, Length 1,150 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-221ENST00000556986 NISCHQ9Y2I1 1504 aa52.92■■■■■ 6.06
KLC1-221ENST00000556986 CCDC180Q9P1Z9 1646 aa47.16■■■■■ 5.14
KLC1-221ENST00000556986 ABCC9O60706 1549 aa46.22■■■■■ 4.99
KLC1-221ENST00000556986 RB1CC1Q8TDY2 1594 aa44.42■■■■■ 4.7
KLC1-221ENST00000556986 NACADO15069 1562 aa44.35■■■■■ 4.69
KLC1-221ENST00000556986 DCAF8L2P0C7V8 631 aa44.15■■■■■ 4.66
KLC1-221ENST00000556986 MYO15BQ96JP2 1530 aa44.08■■■■■ 4.65
KLC1-221ENST00000556986 ZCCHC6Q5VYS8 1495 aaKnown RBP44.04■■■■■ 4.64
KLC1-221ENST00000556986 DCAF1Q9Y4B6 1507 aa43.82■■■■■ 4.61
KLC1-221ENST00000556986 UNC13AQ9UPW8 1703 aa43.53■■■■■ 4.56
KLC1-221ENST00000556986 BICRAQ9NZM4 1560 aa43.16■■■■■ 4.5
KLC1-221ENST00000556986 PABPN1Q86U42 306 aaKnown RBP eCLIP43.15■■■■■ 4.5
KLC1-221ENST00000556986 SCRIBQ14160 1630 aa42.93■■■■■ 4.46
KLC1-221ENST00000556986 DNAJC5BQ9UF47 199 aa42.67■■■■■ 4.42
KLC1-221ENST00000556986 SHROOM4Q9ULL8 1493 aa42.64■■■■■ 4.42
KLC1-221ENST00000556986 EIF4G1Q04637 1599 aaKnown RBP41.97■■■■■ 4.31
KLC1-221ENST00000556986 CC2D2AQ9P2K1 1620 aa41.86■■■■■ 4.29
KLC1-221ENST00000556986 CECR2Q9BXF3 1484 aa41.56■■■■■ 4.24
KLC1-221ENST00000556986 SMARCA4P51532 1647 aa41.11■■■■■ 4.17
KLC1-221ENST00000556986 BAZ1AQ9NRL2 1556 aaPredicted RBP41.01■■■■■ 4.16
KLC1-221ENST00000556986 NCAPD3P42695 1498 aa40.94■■■■■ 4.14
KLC1-221ENST00000556986 ATAD2BQ9ULI0 1458 aa40.91■■■■■ 4.14
KLC1-221ENST00000556986 SMARCA2P51531 1590 aa40.84■■■■■ 4.13
KLC1-221ENST00000556986 MROH2BQ7Z745 1585 aa40.78■■■■■ 4.12
KLC1-221ENST00000556986 PEG3Q9GZU2 1588 aa40.75■■■■■ 4.11
KLC1-221ENST00000556986 HMGXB3Q12766 1538 aa40.71■■■■■ 4.11
KLC1-221ENST00000556986 BAZ1BQ9UIG0 1483 aaKnown RBP40.52■■■■■ 4.08
KLC1-221ENST00000556986 WIZO95785 1651 aa40.35■■■■■ 4.05
KLC1-221ENST00000556986 RSF1Q96T23 1441 aaPredicted RBP40.25■■■■■ 4.03
KLC1-221ENST00000556986 NESP48681 1621 aa39.98■■■■□ 3.99
KLC1-221ENST00000556986 TOP2AP11388 1531 aaKnown RBP39.88■■■■□ 3.97
KLC1-221ENST00000556986 LAMC3Q9Y6N6 1575 aa39.87■■■■□ 3.97
KLC1-221ENST00000556986 ERCC6Q03468 1493 aa39.81■■■■□ 3.96
KLC1-221ENST00000556986 CADPSQ9ULU8 1353 aa39.71■■■■□ 3.95
KLC1-221ENST00000556986 PDS5BQ9NTI5 1447 aa39.57■■■■□ 3.92
KLC1-221ENST00000556986 KIF21AQ7Z4S6 1674 aa39.54■■■■□ 3.92
KLC1-221ENST00000556986 CUX2O14529 1486 aa39.53■■■■□ 3.92
KLC1-221ENST00000556986 CFTRP13569 1480 aa39.45■■■■□ 3.91
KLC1-221ENST00000556986 THOC2Q8NI27 1593 aaKnown RBP39.45■■■■□ 3.91
KLC1-221ENST00000556986 CCDC88BA6NC98 1476 aa39.42■■■■□ 3.9
KLC1-221ENST00000556986 FANCD2Q9BXW9 1451 aa39.23■■■■□ 3.87
KLC1-221ENST00000556986 PRDM2Q13029 1718 aa39.2■■■■□ 3.87
KLC1-221ENST00000556986 CEP164Q9UPV0 1460 aa39.18■■■■□ 3.86
KLC1-221ENST00000556986 MRC2Q9UBG0 1479 aa39.17■■■■□ 3.86
KLC1-221ENST00000556986 WDR62O43379 1518 aa39.09■■■■□ 3.85
KLC1-221ENST00000556986 SUPT5HO00267 1087 aaKnown RBP38.99■■■■□ 3.83
KLC1-221ENST00000556986 URB2Q14146 1524 aaKnown RBP38.89■■■■□ 3.82
KLC1-221ENST00000556986 TOPBP1Q92547 1522 aa38.61■■■■□ 3.77
KLC1-221ENST00000556986 ABCC8Q09428 1581 aa38.59■■■■□ 3.77
KLC1-221ENST00000556986 DNMBPQ6XZF7 1577 aa38.54■■■■□ 3.76
KLC1-221ENST00000556986 DNAJC5Q9H3Z4 198 aa38.54■■■■□ 3.76
KLC1-221ENST00000556986 IFT140Q96RY7 1462 aa38.39■■■■□ 3.74
KLC1-221ENST00000556986 POLA1P09884 1462 aaPredicted RBP38.27■■■■□ 3.72
KLC1-221ENST00000556986 CUX1P39880 1505 aa38.26■■■■□ 3.72
KLC1-221ENST00000556986 TARBP1Q13395 1621 aaKnown RBP38.24■■■■□ 3.71
KLC1-221ENST00000556986 ZNF608Q9ULD9 1512 aaPredicted RBP38.24■■■■□ 3.71
KLC1-221ENST00000556986 FGD5Q6ZNL6 1462 aa38.13■■■■□ 3.69
KLC1-221ENST00000556986 RAD54L2Q9Y4B4 1467 aa38.09■■■■□ 3.69
KLC1-221ENST00000556986 SOGA1O94964 1423 aa38.09■■■■□ 3.69
KLC1-221ENST00000556986 EIF4G3O43432 1585 aaKnown RBP38.09■■■■□ 3.69
KLC1-221ENST00000556986 AQRO60306 1485 aaKnown RBP eCLIP38■■■■□ 3.67
KLC1-221ENST00000556986 WDR97A6NE52 1622 aa37.91■■■■□ 3.66
KLC1-221ENST00000556986 BIVM-ERCC5R4GMW8 1640 aa37.91■■■■□ 3.66
KLC1-221ENST00000556986 WRNQ14191 1432 aaPredicted RBP eCLIP37.91■■■■□ 3.66
KLC1-221ENST00000556986 TOP2BQ02880 1626 aa37.9■■■■□ 3.66
KLC1-221ENST00000556986 TDRD9Q8NDG6 1382 aaKnown RBP37.88■■■■□ 3.65
KLC1-221ENST00000556986 SYNJ1O43426 1573 aa37.86■■■■□ 3.65
KLC1-221ENST00000556986 OSCARQ8IYS5 282 aa37.83■■■■□ 3.65
KLC1-221ENST00000556986 ABCA10Q8WWZ4 1543 aa37.78■■■■□ 3.64
KLC1-221ENST00000556986 CHD1O14646 1710 aa37.67■■■■□ 3.62
KLC1-221ENST00000556986 GRIN2BQ13224 1484 aa37.66■■■■□ 3.62
KLC1-221ENST00000556986 ABCA5Q8WWZ7 1642 aa37.66■■■■□ 3.62
KLC1-221ENST00000556986 GAPVD1Q14C86 1478 aa37.64■■■■□ 3.62
KLC1-221ENST00000556986 SNAPC4Q5SXM2 1469 aa37.63■■■■□ 3.61
KLC1-221ENST00000556986 PBRM1Q86U86 1689 aa37.63■■■■□ 3.61
KLC1-221ENST00000556986 MAGI1Q96QZ7 1491 aaPredicted RBP37.59■■■■□ 3.61
KLC1-221ENST00000556986 FBLN2P98095 1184 aa37.48■■■■□ 3.59
KLC1-221ENST00000556986 SYNJ2O15056 1496 aa37.45■■■■□ 3.59
KLC1-221ENST00000556986 CHMP7Q8WUX9 453 aaPredicted RBP37.4■■■■□ 3.58
KLC1-221ENST00000556986 ERICH3Q5RHP9 1530 aa37.33■■■■□ 3.57
KLC1-221ENST00000556986 RIMBP3CA6NJZ7 1639 aa37.29■■■■□ 3.56
KLC1-221ENST00000556986 RIMBP3BA6NNM3 1639 aa37.29■■■■□ 3.56
KLC1-221ENST00000556986 RIMBP3Q9UFD9 1639 aa37.29■■■■□ 3.56
KLC1-221ENST00000556986 ADAMTS12P58397 1594 aa37.29■■■■□ 3.56
KLC1-221ENST00000556986 CLASP1Q7Z460 1538 aa37.26■■■■□ 3.56
KLC1-221ENST00000556986 ARHGEF11O15085 1522 aa37.24■■■■□ 3.55
KLC1-221ENST00000556986 FHAD1B1AJZ9 1412 aa37.2■■■■□ 3.55
KLC1-221ENST00000556986 GRIN2AQ12879 1464 aa37.19■■■■□ 3.54
KLC1-221ENST00000556986 KIF27Q86VH2 1401 aa37.12■■■■□ 3.53
KLC1-221ENST00000556986 TRIM41Q8WV44 630 aa37.08■■■■□ 3.53
KLC1-221ENST00000556986 NUP160Q12769 1436 aa37.06■■■■□ 3.52
KLC1-221ENST00000556986 IGF1RP08069 1367 aa37.04■■■■□ 3.52
KLC1-221ENST00000556986 CEP170Q5SW79 1584 aa37.04■■■■□ 3.52
KLC1-221ENST00000556986 CUL7Q14999 1698 aa36.95■■■■□ 3.51
KLC1-221ENST00000556986 ARAP1Q96P48 1450 aa36.94■■■■□ 3.5
KLC1-221ENST00000556986 CYB5RLQ6IPT4 315 aa36.86■■■■□ 3.49
KLC1-221ENST00000556986 SHROOM2Q13796 1616 aa36.83■■■■□ 3.49
KLC1-221ENST00000556986 RUSC2Q8N2Y8 1516 aa36.8■■■■□ 3.48
KLC1-221ENST00000556986 CARMIL1Q5VZK9 1371 aa36.79■■■■□ 3.48
KLC1-221ENST00000556986 ERCC6L2Q5T890 1561 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms