RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 NISCHQ9Y2I1 1504 aa43.96■■■■■ 4.63
XRCC3-217ENST00000556980 CCDC180Q9P1Z9 1646 aa39.16■■■■□ 3.86
XRCC3-217ENST00000556980 ABCC9O60706 1549 aa38.61■■■■□ 3.77
XRCC3-217ENST00000556980 RB1CC1Q8TDY2 1594 aa37.02■■■■□ 3.52
XRCC3-217ENST00000556980 NACADO15069 1562 aa36.91■■■■□ 3.5
XRCC3-217ENST00000556980 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
XRCC3-217ENST00000556980 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
XRCC3-217ENST00000556980 ZCCHC6Q5VYS8 1495 aaKnown RBP36.57■■■■□ 3.45
XRCC3-217ENST00000556980 DCAF1Q9Y4B6 1507 aa36.34■■■■□ 3.41
XRCC3-217ENST00000556980 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
XRCC3-217ENST00000556980 PABPN1Q86U42 306 aaKnown RBP eCLIP36.05■■■■□ 3.36
XRCC3-217ENST00000556980 BICRAQ9NZM4 1560 aa35.86■■■■□ 3.33
XRCC3-217ENST00000556980 SCRIBQ14160 1630 aa35.76■■■■□ 3.32
XRCC3-217ENST00000556980 DNAJC5BQ9UF47 199 aa35.61■■■■□ 3.29
XRCC3-217ENST00000556980 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
XRCC3-217ENST00000556980 EIF4G1Q04637 1599 aaKnown RBP34.97■■■■□ 3.19
XRCC3-217ENST00000556980 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
XRCC3-217ENST00000556980 CECR2Q9BXF3 1484 aa34.72■■■■□ 3.15
XRCC3-217ENST00000556980 SMARCA4P51532 1647 aa34.15■■■■□ 3.06
XRCC3-217ENST00000556980 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
XRCC3-217ENST00000556980 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
XRCC3-217ENST00000556980 ATAD2BQ9ULI0 1458 aa34.05■■■■□ 3.04
XRCC3-217ENST00000556980 SMARCA2P51531 1590 aa34■■■■□ 3.03
XRCC3-217ENST00000556980 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
XRCC3-217ENST00000556980 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
XRCC3-217ENST00000556980 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
XRCC3-217ENST00000556980 BAZ1BQ9UIG0 1483 aaKnown RBP33.79■■■■□ 3
XRCC3-217ENST00000556980 WIZO95785 1651 aa33.47■■■□□ 2.95
XRCC3-217ENST00000556980 RSF1Q96T23 1441 aaPredicted RBP33.42■■■□□ 2.94
XRCC3-217ENST00000556980 ERCC6Q03468 1493 aa33.34■■■□□ 2.93
XRCC3-217ENST00000556980 NESP48681 1621 aa33.32■■■□□ 2.92
XRCC3-217ENST00000556980 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
XRCC3-217ENST00000556980 TOP2AP11388 1531 aaKnown RBP33.15■■■□□ 2.9
XRCC3-217ENST00000556980 CADPSQ9ULU8 1353 aa33.07■■■□□ 2.88
XRCC3-217ENST00000556980 CUX2O14529 1486 aa33.03■■■□□ 2.88
XRCC3-217ENST00000556980 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
XRCC3-217ENST00000556980 KIF21AQ7Z4S6 1674 aa32.87■■■□□ 2.85
XRCC3-217ENST00000556980 THOC2Q8NI27 1593 aaKnown RBP32.85■■■□□ 2.85
XRCC3-217ENST00000556980 CFTRP13569 1480 aa32.81■■■□□ 2.84
XRCC3-217ENST00000556980 CCDC88BA6NC98 1476 aa32.74■■■□□ 2.83
XRCC3-217ENST00000556980 FANCD2Q9BXW9 1451 aa32.71■■■□□ 2.83
XRCC3-217ENST00000556980 CEP164Q9UPV0 1460 aa32.7■■■□□ 2.83
XRCC3-217ENST00000556980 MRC2Q9UBG0 1479 aa32.69■■■□□ 2.82
XRCC3-217ENST00000556980 WDR62O43379 1518 aa32.56■■■□□ 2.8
XRCC3-217ENST00000556980 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
XRCC3-217ENST00000556980 SUPT5HO00267 1087 aaKnown RBP32.44■■■□□ 2.78
XRCC3-217ENST00000556980 URB2Q14146 1524 aaKnown RBP32.37■■■□□ 2.77
XRCC3-217ENST00000556980 DNAJC5Q9H3Z4 198 aa32.28■■■□□ 2.76
XRCC3-217ENST00000556980 TOPBP1Q92547 1522 aa32.14■■■□□ 2.74
XRCC3-217ENST00000556980 ABCC8Q09428 1581 aa32.13■■■□□ 2.73
XRCC3-217ENST00000556980 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
XRCC3-217ENST00000556980 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
XRCC3-217ENST00000556980 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
XRCC3-217ENST00000556980 POLA1P09884 1462 aaPredicted RBP31.85■■■□□ 2.69
XRCC3-217ENST00000556980 CUX1P39880 1505 aa31.8■■■□□ 2.68
XRCC3-217ENST00000556980 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
XRCC3-217ENST00000556980 FGD5Q6ZNL6 1462 aa31.75■■■□□ 2.67
XRCC3-217ENST00000556980 EIF4G3O43432 1585 aaKnown RBP31.73■■■□□ 2.67
XRCC3-217ENST00000556980 SOGA1O94964 1423 aa31.73■■■□□ 2.67
XRCC3-217ENST00000556980 RAD54L2Q9Y4B4 1467 aa31.72■■■□□ 2.67
XRCC3-217ENST00000556980 AQRO60306 1485 aaKnown RBP eCLIP31.67■■■□□ 2.666e-6■■■■□ 25.1
XRCC3-217ENST00000556980 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
XRCC3-217ENST00000556980 TDRD9Q8NDG6 1382 aaKnown RBP31.59■■■□□ 2.65
XRCC3-217ENST00000556980 WRNQ14191 1432 aaPredicted RBP eCLIP31.54■■■□□ 2.64
XRCC3-217ENST00000556980 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
XRCC3-217ENST00000556980 TOP2BQ02880 1626 aa31.46■■■□□ 2.63
XRCC3-217ENST00000556980 SYNJ1O43426 1573 aa31.44■■■□□ 2.62
XRCC3-217ENST00000556980 BIVM-ERCC5R4GMW8 1640 aa31.43■■■□□ 2.62
XRCC3-217ENST00000556980 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
XRCC3-217ENST00000556980 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
XRCC3-217ENST00000556980 FBLN2P98095 1184 aa31.39■■■□□ 2.62
XRCC3-217ENST00000556980 SNAPC4Q5SXM2 1469 aa31.39■■■□□ 2.62
XRCC3-217ENST00000556980 GAPVD1Q14C86 1478 aa31.36■■■□□ 2.61
XRCC3-217ENST00000556980 CHD1O14646 1710 aa31.33■■■□□ 2.61
XRCC3-217ENST00000556980 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
XRCC3-217ENST00000556980 ABCA5Q8WWZ7 1642 aa31.3■■■□□ 2.6
XRCC3-217ENST00000556980 CHMP7Q8WUX9 453 aaPredicted RBP31.25■■■□□ 2.59
XRCC3-217ENST00000556980 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
XRCC3-217ENST00000556980 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
XRCC3-217ENST00000556980 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
XRCC3-217ENST00000556980 RIMBP3CA6NJZ7 1639 aa31.11■■■□□ 2.57
XRCC3-217ENST00000556980 RIMBP3BA6NNM3 1639 aa31.11■■■□□ 2.57
XRCC3-217ENST00000556980 RIMBP3Q9UFD9 1639 aa31.11■■■□□ 2.57
XRCC3-217ENST00000556980 ARHGEF11O15085 1522 aa31.1■■■□□ 2.57
XRCC3-217ENST00000556980 ADAMTS12P58397 1594 aa31.04■■■□□ 2.56
XRCC3-217ENST00000556980 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
XRCC3-217ENST00000556980 CLASP1Q7Z460 1538 aa31.03■■■□□ 2.56
XRCC3-217ENST00000556980 FHAD1B1AJZ9 1412 aa31■■■□□ 2.55
XRCC3-217ENST00000556980 GRIN2AQ12879 1464 aa30.98■■■□□ 2.55
XRCC3-217ENST00000556980 KIF27Q86VH2 1401 aa30.91■■■□□ 2.54
XRCC3-217ENST00000556980 CYB5RLQ6IPT4 315 aa30.85■■■□□ 2.53
XRCC3-217ENST00000556980 NUP160Q12769 1436 aa30.84■■■□□ 2.53
XRCC3-217ENST00000556980 ARAP1Q96P48 1450 aa30.83■■■□□ 2.53
XRCC3-217ENST00000556980 CEP170Q5SW79 1584 aa30.82■■■□□ 2.52
XRCC3-217ENST00000556980 IGF1RP08069 1367 aa30.78■■■□□ 2.52
XRCC3-217ENST00000556980 CUL7Q14999 1698 aa30.7■■■□□ 2.5
XRCC3-217ENST00000556980 CARMIL1Q5VZK9 1371 aa30.61■■■□□ 2.49
XRCC3-217ENST00000556980 SHROOM2Q13796 1616 aa30.6■■■□□ 2.49
XRCC3-217ENST00000556980 RUSC2Q8N2Y8 1516 aa30.58■■■□□ 2.49
XRCC3-217ENST00000556980 ERCC6L2Q5T890 1561 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms